NO12G00590, NO12G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00590 vs. NCBI_GenBank
Match: EJK69295.1 (hypothetical protein THAOC_09457 [Thalassiosira oceanica]) HSP 1 Score: 92.0 bits (227), Expect = 7.500e-15 Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 64 PAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 PA R E+EAY+ QLE++ + P GK LIRP GFV+K + R + K+FVN+V S+++A P+A+ + G ++P+ +GP RME+DN+G VPT D C HP A+ LA Sbjct: 43 PASRREQEAYLSQLESQNETPGGKKLIRPAKGFVLKCLH------------RKRRDSPATRPAKLFVNVVHSEEVAAPSAS------ERDGGTSWSLPHALGPLRMEQDNRGRLVPTFDCCFHPNALRLA 154
BLAST of NO12G00590 vs. NCBI_GenBank
Match: POM78353.1 (Hypothetical protein PHPALM_4126 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 90.9 bits (224), Expect = 1.700e-14 Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 0 Query: 3 AEEEKDIAALSHIINGSPGTDNINPPTPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 A E ++ AL S T TP+E + + ++ E SL+++ + +S P R E E Y+ QLENE KVP K L++PK GFV+KT + + KVFVN+ SSDK+ P++T + G+ G +P +GP R+E D G+ VPT D C HP V A Sbjct: 5 APSEAEMGALFEAAMRSQKTGTEPKVTPQEQQKFLSAMKDPEFRSLLNEYMQEIS-------DPRNRAETEQYLTQLENEQKVPTDKQLVKPKPGFVVKT--------------------KWESTQKVFVNVCSSDKMQPPSST---RVMTGQQGTSWNLPYSLGPERLEPDKGGSGVPTFDVCFHPRVVEFA 167
BLAST of NO12G00590 vs. NCBI_GenBank
Match: XP_009830619.1 (hypothetical protein H257_06933 [Aphanomyces astaci] >ETV79683.1 hypothetical protein H257_06933 [Aphanomyces astaci]) HSP 1 Score: 90.5 bits (223), Expect = 2.200e-14 Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 29 TPEESEALVRILQEKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHK-TKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 T +E ++ ++ +++ P S L E + H PA R E+E Y++QLENE KVP K L+ PK GFV+KT K+K K+FVN+ SSDK+ P++T S+ G +P VGP R+E D G ++ T D C HP + A Sbjct: 30 TEKEQQSFLKAMKD-PDFRSLLNEYM----HEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKT----------------------KYKQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGKAIATFDVCYHPQTISRA 168
BLAST of NO12G00590 vs. NCBI_GenBank
Match: POM66050.1 (Hypothetical protein PHPALM_18149 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 89.7 bits (221), Expect = 3.700e-14 Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0 Query: 3 AEEEKDIAALSHIINGSPGTDNINPPTPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 A E ++ AL S + TP+E + + ++ E SL+++ + +S P R E E Y+ QLENE KVP K L++PK GFV+KT + + KVFVN+ SSDK+ P++T + G+ G +P +GP R+E D G+ VPT D C HP V A Sbjct: 5 APSEAEMGALFEAAMRSQKSGTEPKVTPQEQQKFLSAMKDPEFRSLLNEYMQEIS-------DPRNRAETEQYLTQLENEQKVPTDKQLVKPKPGFVVKT--------------------KWESTQKVFVNVCSSDKMQPPSST---RVMTGQQGTSWNLPYSLGPERLESDKGGSGVPTFDVCFHPRVVEFA 167
BLAST of NO12G00590 vs. NCBI_GenBank
Match: XP_012205912.1 (hypothetical protein SPRG_11517 [Saprolegnia parasitica CBS 223.65] >KDO23424.1 hypothetical protein SPRG_11517 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 89.0 bits (219), Expect = 6.300e-14 Identity = 59/159 (37.11%), Postives = 79/159 (49.69%), Query Frame = 0 Query: 29 TPEESEALVRILQEKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHP 188 TP+E ++ V+ +++ P S L E + P R E+EAY++QLEN+ KVP K L+ P GFV+KT KVFVNI SSDK+ P++T S + AG +P VGP RME D G +V T D C HP Sbjct: 29 TPDEQQSFVKAMKD-PEFRSLLNEYML----EISDPTHRAEQEAYLRQLENDNKVPTDKQLVLPTPGFVLKT---------------------KLQARKVFVNICSSDKIQPPSSTKVAPSPQVAAGTSWNLPYCVGPQRMEHDKGGQAVMTFDVCYHP 161
BLAST of NO12G00590 vs. NCBI_GenBank
Match: ETI54820.1 (hypothetical protein F443_02415 [Phytophthora parasitica P1569]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 29 TPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 TPEE + ++ E SL+++ + +S P REE E Y+ QLE+E KVP K LI+P GFV+KT + + K+F+N+ SSDK+ P++T S G+ G +P +GP R+E D GASVPT D C HP V + Sbjct: 48 TPEEQTRFLSAMKDPEFRSLLNEYMQEIS-------DPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKT--------------------KWDNTHKIFINVCSSDKMQPPSSTRVTS---GQQGTSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFS 184
BLAST of NO12G00590 vs. NCBI_GenBank
Match: ETK94680.1 (hypothetical protein L915_02295 [Phytophthora parasitica]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 29 TPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 TPEE + ++ E SL+++ + +S P REE E Y+ QLE+E KVP K LI+P GFV+KT + + K+F+N+ SSDK+ P++T S G+ G +P +GP R+E D GASVPT D C HP V + Sbjct: 48 TPEEQTRFLSAMKDPEFRSLLNEYMQEIS-------DPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKT--------------------KWDNTHKIFINVCSSDKMQPPSSTRVTS---GQQGTSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFS 184
BLAST of NO12G00590 vs. NCBI_GenBank
Match: ETL48077.1 (hypothetical protein L916_02255 [Phytophthora parasitica]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 29 TPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 TPEE + ++ E SL+++ + +S P REE E Y+ QLE+E KVP K LI+P GFV+KT + + K+F+N+ SSDK+ P++T S G+ G +P +GP R+E D GASVPT D C HP V + Sbjct: 48 TPEEQTRFLSAMKDPEFRSLLNEYMQEIS-------DPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKT--------------------KWDNTHKIFINVCSSDKMQPPSSTRVTS---GQQGTSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFS 184
BLAST of NO12G00590 vs. NCBI_GenBank
Match: ETM01168.1 (hypothetical protein L917_02192 [Phytophthora parasitica]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 29 TPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 TPEE + ++ E SL+++ + +S P REE E Y+ QLE+E KVP K LI+P GFV+KT + + K+F+N+ SSDK+ P++T S G+ G +P +GP R+E D GASVPT D C HP V + Sbjct: 48 TPEEQTRFLSAMKDPEFRSLLNEYMQEIS-------DPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKT--------------------KWDNTHKIFINVCSSDKMQPPSSTRVTS---GQQGTSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFS 184
BLAST of NO12G00590 vs. NCBI_GenBank
Match: ETM54349.1 (hypothetical protein L914_02285 [Phytophthora parasitica]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 29 TPEESEALVRILQ--EKPSLISKLAETLSPCRHAAPSPAQREEKEAYMQQLENEGKVPEGKVLIRPKAGFVIKTFRMVMEGAEENGGGERDRVAEPKHKTKVFVNIVSSDKLARPTATGDPSSVKGKAGKMITVPNVVGPSRMEEDNKGASVPTVDFCVHPYAVHLA 194 TPEE + ++ E SL+++ + +S P REE E Y+ QLE+E KVP K LI+P GFV+KT + + K+F+N+ SSDK+ P++T S G+ G +P +GP R+E D GASVPT D C HP V + Sbjct: 48 TPEEQTRFLSAMKDPEFRSLLNEYMQEIS-------DPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKT--------------------KWDNTHKIFINVCSSDKMQPPSSTRVTS---GQQGTSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFS 184 The following BLAST results are available for this feature:
BLAST of NO12G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00590 ID=NO12G00590|Name=NO12G00590|organism=Nannochloropsis oceanica|type=gene|length=2562bpback to top protein sequence of NO12G00590.1 >NO12G00590.1-protein ID=NO12G00590.1-protein|Name=NO12G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=687bpback to top Synonyms
Publications
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