NO12G00580, NO12G00580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00580 vs. NCBI_GenBank
Match: XP_005856029.1 (s-adenosylmethionine decarboxylase proenzyme [Nannochloropsis gaditana CCMP526] >EKU20322.1 s-adenosylmethionine decarboxylase proenzyme [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 224.2 bits (570), Expect = 4.400e-55 Identity = 117/189 (61.90%), Postives = 141/189 (74.60%), Query Frame = 0 Query: 2 KSISRHAVSDNYDAGGHSSSSTSGQDQLKAHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLHVDMDMEGEGGGRREEGEGGPLVLDRWMAVEDETSYYNN 191 +SI+ V+ N D STS +KAHG H+TLDYTSFFVDA+DGA +T++L+RAAV+EAGVREVHSH+ VLG+DGLSPPGFTGICLIDESHVSAHCYSE+GWLALDVFTCG TDPA IA LH+RLT AVPGL ++R M DRFLH+DM +GG E+ E + +DR + DE + N Sbjct: 70 ESIASCDVNGNVDV-----PSTSNDGVIKAHGRHLTLDYTSFFVDAQDGATMTLALVRAAVREAGVREVHSHVVVLGDDGLSPPGFTGICLIDESHVSAHCYSEKGWLALDVFTCGPTDPAEIADKLHQRLTDAVPGLHLVRRMAHDRFLHLDM---AQGGS--EDREQTRVNVDRKLDGFDEALFGAN 248
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIF01373.1 (S-adenosylmethionine decarboxylase [uncultured marine group II/III euryarchaeote KM3_146_G03]) HSP 1 Score: 139.4 bits (350), Expect = 1.400e-29 Identity = 67/139 (48.20%), Postives = 90/139 (64.75%), Query Frame = 0 Query: 23 TSGQDQLKAHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGL-SPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLHVDMDMEGE 161 T G D+ AHG H+ LDY +F + D +SL+R++V E GV+EVH+H EV DG+ SPPGF I LIDESHV+AHCYSE+GWLA+D FTCG DP + +H +L A L+++ ++RFLH D+ E Sbjct: 6 TDGLDERFAHGRHVYLDYVNFNPEVEDIDTWVLSLLRSSVSECGVKEVHAHCEVF--DGVESPPGFAAIVLIDESHVTAHCYSEKGWLAIDAFTCGTHDPNDLVDVIHAKLIAGCENLKLMNRNIVERFLHDDLSQNKE 142
BLAST of NO12G00580 vs. NCBI_GenBank
Match: XP_005767727.1 (hypothetical protein EMIHUDRAFT_211444 [Emiliania huxleyi CCMP1516] >XP_005774388.1 hypothetical protein EMIHUDRAFT_240722 [Emiliania huxleyi CCMP1516] >EOD15298.1 hypothetical protein EMIHUDRAFT_211444 [Emiliania huxleyi CCMP1516] >EOD21959.1 hypothetical protein EMIHUDRAFT_240722 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 131.0 bits (328), Expect = 5.100e-27 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0 Query: 29 LKAHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCG-KTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLHVDMDME 159 L AHG H+ LD+ F V+ T++ + AA G VHS + +LGEDG +PPGFT L+DESH +AHCYSE GWLA+DVFTCG + D A + +++ VPG+R + ++DRFLH ++++E Sbjct: 28 LAAHGSHVVLDFEGFAVEPAAAGRWTLATLEAAAAAHGATVVHSKLVLLGEDGTTPPGFTAAVLLDESHATAHCYSEHGWLAVDVFTCGAQADTLGFADAVRRKVEGYVPGVRCTQHASIDRFLHRELELE 158
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIF20807.1 (S-adenosylmethionine decarboxylase [uncultured marine group II/III euryarchaeote KM3_94_C01]) HSP 1 Score: 129.0 bits (323), Expect = 1.900e-26 Identity = 59/122 (48.36%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 33 GHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLHVD 155 G H+TLDY + + A ++L+ A +AG REVH+H E + +SPPGF + L+DESHVSAHCYSERG LA+D FTCG DP I +LH+ LT ++PG++++R +L+RFL+ D Sbjct: 19 GKHVTLDYIGYVSPNGNDAEWMLALLSEAAAKAGAREVHAHAESF-DGSVSPPGFAAVVLLDESHVSAHCYSERGLLAIDAFTCGDADPNQITDHLHEVLTKSIPGIKLVRKDSLNRFLNGD 139
BLAST of NO12G00580 vs. NCBI_GenBank
Match: OUV16971.1 (hypothetical protein CBC59_03730 [Euryarchaeota archaeon TMED99]) HSP 1 Score: 128.3 bits (321), Expect = 3.300e-26 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 29 LKAHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLH 153 L+AHG H+ LDYT + ++ + L+ AV+ + R VHSH+E + LSP GF + L+DESHV+AHCYSE+GWLALD FTCG +DP +A ++H +L +P L + R +++RFLH Sbjct: 4 LEAHGAHVFLDYTGYVPPHQNDGQWILELLEQAVERSTARNVHSHVEPF-DGSLSPIGFAAVVLLDESHVTAHCYSEKGWLALDCFTCGGSDPNALADDIHHQLVKEIPSLSLRRRQHVERFLH 126
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIF02979.1 (S-adenosylmethionine decarboxylase proenzyme (speD) [uncultured marine group II/III euryarchaeote KM3_15_H06]) HSP 1 Score: 127.1 bits (318), Expect = 7.300e-26 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 0 Query: 33 GHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLH 153 G H+TLDY + + A + L+R A +AG REVH+H E + +SPPGF + L+DESHVSAHCYSERG LA+D FTCG+TDP I +LH L A+P ++++R +L RFL+ Sbjct: 4 GKHVTLDYVGYVSPNGNDAEWMLELLREAAAKAGAREVHAHAEPF-DGSVSPPGFAAVVLLDESHVSAHCYSERGLLAIDAFTCGETDPNQITDHLHAVLIEAIPEIKLVRKDSLKRFLN 122
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIF03972.1 (deoxyhypusine synthase family protein (dys1) [uncultured marine group II/III euryarchaeote KM3_16_D12]) HSP 1 Score: 127.1 bits (318), Expect = 7.300e-26 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 0 Query: 33 GHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRFLH 153 G H+TLDY + + A + L+R A +AG REVH+H E + +SPPGF + L+DESHVSAHCYSERG LA+D FTCG+TDP I +LH L A+P ++++R +L RFL+ Sbjct: 4 GKHVTLDYVGYVSPNGNDAEWMLELLREAAAKAGAREVHAHAEPF-DGSVSPPGFAAVVLLDESHVSAHCYSERGLLAIDAFTCGETDPNQITDHLHAVLIEAIPEIKLVRKDSLKRFLN 122
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIE92712.1 (S-adenosylmethionine decarboxylase [uncultured marine group II/III euryarchaeote AD1000_26_F08]) HSP 1 Score: 125.6 bits (314), Expect = 2.100e-25 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 31 AHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRF 151 A G H+ LDYT + + A + ++R V AG+REVH+H+ + G SPPGF + LIDESHVSAHCYSE G LA+D+FTCG +DP +A ++H + AVPGL + LDRF Sbjct: 6 ARGGHVVLDYTGYSPPVDEDGAWMLQVLRDCVNRAGIREVHAHVAQF-DGGESPPGFAAVVLIDESHVSAHCYSESGLLAIDIFTCGDSDPGSLADDIHSMVVEAVPGLELSGRERLDRF 124
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIE94638.1 (S-adenosylmethionine decarboxylase [uncultured marine group II/III euryarchaeote AD1000_49_G12]) HSP 1 Score: 125.6 bits (314), Expect = 2.100e-25 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 31 AHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRF 151 A G H+ LDYT + + A + ++R V AG+REVH+H+ + G SPPGF + LIDESHVSAHCYSE G LA+D+FTCG +DP +A ++H + AVPGL + LDRF Sbjct: 6 ARGGHVVLDYTGYSPPVDEDGAWMLQVLRDCVNRAGIREVHAHVAQF-DGGESPPGFAAVVLIDESHVSAHCYSESGLLAIDIFTCGDSDPGPLADDIHSMVVEAVPGLELSGRERLDRF 124
BLAST of NO12G00580 vs. NCBI_GenBank
Match: AIF15743.1 (S-adenosylmethionine decarboxylase [uncultured marine group II/III euryarchaeote KM3_71_C12]) HSP 1 Score: 125.2 bits (313), Expect = 2.800e-25 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 0 Query: 31 AHGHHITLDYTSFFVDARDGAALTMSLIRAAVKEAGVREVHSHMEVLGEDGLSPPGFTGICLIDESHVSAHCYSERGWLALDVFTCGKTDPAVIAGNLHKRLTAAVPGLRMIRGMNLDRF 151 A G H+ LDYT + + A + ++R V AG+REVH+H+ + G SPPGF + LIDESHVSAHCYSE G LA+D+FTCG +DP +A +H + AVPGL + LDRF Sbjct: 23 ARGGHVVLDYTGYSPPVDEDGAWMLQVLRDCVNRAGIREVHAHVAQF-DGGESPPGFAAVVLIDESHVSAHCYSESGLLAIDIFTCGDSDPGPLADEIHSMVVEAVPGLELSGRERLDRF 141 The following BLAST results are available for this feature:
BLAST of NO12G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00580 ID=NO12G00580|Name=NO12G00580|organism=Nannochloropsis oceanica|type=gene|length=1097bpback to top protein sequence of NO12G00580.1 >NO12G00580.1-protein ID=NO12G00580.1-protein|Name=NO12G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top Synonyms
Publications
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