NO12G00530, NO12G00530 (gene) Nannochloropsis oceanica

Overview
NameNO12G00530
Unique NameNO12G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length714
Alignment locationchr12:197351..198064 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:197351..198064 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL128nonsL128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR011ngnoR011Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00530.1NO12G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00530.1NO12G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00530 ID=NO12G00530|Name=NO12G00530|organism=Nannochloropsis oceanica|type=gene|length=714bp
ATGTTGGACAACAGCCCCTACACTACCATTATGgtagattgccaggagca
gtagaatgttttcccctcctcccaagaaccgaggcaggcgtgcgtggcac
gcggctgttttgtttactgccgccgcacccacctatccccccccccctcc
gtccgttccctccttcctacccacccatgcgccacacaccacacacccac
agCTGATTCCCCCGCGCGTCGGCCTGGAGGTGAATGACAGTATCGTGGCC
ACACCAAAGGGACAGGAGGGCGCCGAGGCAGGCgtgcgtggcacgtagct
gttttgtttactgccgccgcacccacctatccccccccccctccgttccc
tccttcctacccacccattcaccgcgactacaacttacattttgccatta
tgccaaggataacaccacaccctccattagagccgtcacacttcctctct
atttccccccctcccccccccccgtcctcaaaccacagacaaaggtacac
ctcgattgtgggcagcgtctaaacccaattgcgagaatggcagAAGGAGA
AGGAGGTGAAGGAGGTGGAGAAGGAGGAGAAGGAGGTGGATAAGGAGAAG
GAGGAGGTGGAGGAGGAGGAGGAGGAGGGGGAGAAGGGGGAGGAGGCGGA
GGAGGAGAAGAAGAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGG
AGAGGAAGAGTTAA
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protein sequence of NO12G00530.1

>NO12G00530.1-protein ID=NO12G00530.1-protein|Name=NO12G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=95bp
MLDNSPYTTIMLIPPRVGLEVNDSIVATPKGQEGAEAGKEKEVKEVEKEE
KEVDKEKEEVEEEEEEGEKGEEAEEEKKRRKKKTNKKKKEERKS*
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Synonyms
Publications