NO12G00490, NO12G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00490 vs. NCBI_GenBank
Match: EWM25970.1 (atp-dependent rna helicase ddx42, partial [Nannochloropsis gaditana]) HSP 1 Score: 808.9 bits (2088), Expect = 1.500e-230 Identity = 485/719 (67.45%), Postives = 543/719 (75.52%), Query Frame = 0 Query: 1 MNFRRPGGQTYRPPATASANISSNSTAALASKAGSSAEADYLAKARQKAKGLKGWFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATVPGPTSVMSTPLSSGEEKE--VDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVAGEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 MNFRRPGGQ YRP T+S + N A+ +GS+A A +A Q+++ +K WFD XXXXXXXXXXXXXXXXXXXXXX GA +V STP G EKE FM GVQ+KV+EEA+ ++A +KP +LDE A Y+ RR GEDD +YDSDAEVYAA GL PGK YSR+GPEGKKAME LPPLDHAS+ YPPFRKCFY E P+VT MDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSE LLREI+KRGF+APTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPA+VHLMDQP + +G+GPIVLILAPTRELASQIYVEA KF+KPHGA+ AA+FGGAGKWEQ+KLLK GVEIL+ATPGRLLE LK KATNL RCT LVLDEADRMFDLGFE+Q+HSVLGQIRPDRQ+L+FSATFKRKVE LA +VL+DP+R+VCG+AGQANEDV QEVVV+P EE K +WL LV GKVLVFVSSKQGCED+AGRL +L SS W+VE LHGDKDQ ERSLI XXXXXXXXXXXXXX CRVLVATDVASRGLDIKD+RNV+N+DMAR+MEAHVHRCGRTGRM+VEGGREGG A+TLLTP+D+GMAGE+VKGLEGARQ+VP ALRAM Sbjct: 1 MNFRRPGGQAYRP--TSSNRNAGNPFASKNDPSGSNAGAGSTVRASQQSQSVKDWFD--DXXXXXXXXXXXXXXXXXXXXXXEEEEDPIDAFIKEQQGSCHQGKNGALNDSSKAVSSTP---GPEKEXXXXXXXXFMVGVQSKVEEEARHTTEAGVEKPVFLDETAXXXXXXXXXXXXXXXXXXXGYISRRRPGEDDADYDSDAEVYAA----GAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMR-REGSSAGGWEVETLHGDKDQSERSLI-MRRFKRQEXXXXXXXXXXXXXXXXCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAM 706
BLAST of NO12G00490 vs. NCBI_GenBank
Match: ETI45761.1 (hypothetical protein F443_09746 [Phytophthora parasitica P1569]) HSP 1 Score: 474.6 bits (1220), Expect = 6.600e-130 Identity = 271/597 (45.39%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: ETK85710.1 (hypothetical protein L915_09551 [Phytophthora parasitica] >ETL39140.1 hypothetical protein L916_09452 [Phytophthora parasitica] >ETO74411.1 hypothetical protein F444_09843 [Phytophthora parasitica P1976] >ETP15584.1 hypothetical protein F441_09686 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 474.6 bits (1220), Expect = 6.600e-130 Identity = 271/597 (45.39%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: ETM45575.1 (hypothetical protein L914_09420 [Phytophthora parasitica]) HSP 1 Score: 474.6 bits (1220), Expect = 6.600e-130 Identity = 271/597 (45.39%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: ETP43648.1 (hypothetical protein F442_09647 [Phytophthora parasitica P10297]) HSP 1 Score: 474.6 bits (1220), Expect = 6.600e-130 Identity = 271/597 (45.39%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: XP_008892761.1 (hypothetical protein PPTG_01275 [Phytophthora parasitica INRA-310] >ETN20909.1 hypothetical protein PPTG_01275 [Phytophthora parasitica INRA-310]) HSP 1 Score: 474.2 bits (1219), Expect = 8.600e-130 Identity = 271/597 (45.39%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEVLALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: KUF81352.1 (DEAD-box ATP-dependent RNA helicase 24 [Phytophthora nicotianae]) HSP 1 Score: 473.0 bits (1216), Expect = 1.900e-129 Identity = 271/604 (44.87%), Postives = 374/604 (61.92%), Query Frame = 0 Query: 117 STPLSSGEEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 S ++ ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M K MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 34 SPAATAADDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---ATKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 574
BLAST of NO12G00490 vs. NCBI_GenBank
Match: ETL77833.1 (hypothetical protein L917_21256 [Phytophthora parasitica]) HSP 1 Score: 472.6 bits (1215), Expect = 2.500e-129 Identity = 270/597 (45.23%), Postives = 371/597 (62.14%), Query Frame = 0 Query: 124 EEKEVDPLDAFMAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVA---GEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 ++ EVDPLDAFM G+ +V+++ P + DKP+ L+ + D +F ++ + RV G+D DSD EVYA L+ M KK MEVL P+DH+ + Y PFRK FY + + ++ +E+ R EL ++VEG + P+ SF H GF + +L+ ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFE QL SV+GQ+RPDRQTL+FSATF++++E LA +VL +PV++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L + + P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 42 DDDEVDPLDAFMQGIDTEVKQQRTAPPKLVADKPQVLNHVDDDAD-------SFLEEYARTTKKPRVGLNLGDD----DSDEEVYATAKQ--------------------LDDADAPDDM---AKKVMEVLTPVDHSIMTYEPFRKNFYAPRSETSALNAQEVASIR-SELNIRVEGADVPAPVRSFMH-LGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMLRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCVAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQTLMFSATFRKRIEALALDVLTNPVKLTIGQVGQANEDIRQIAVVLPGHGAKWPWLMSKIRALVDEGRLLIFAGSKAGCEELAKNLAV---------AFPVAPALCLHGDKTQKERA-----------------EALMKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGQE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 575
BLAST of NO12G00490 vs. NCBI_GenBank
Match: OWZ23646.1 (DEAD/DEAH box RNA helicase [Phytophthora megakarya]) HSP 1 Score: 470.7 bits (1210), Expect = 9.500e-129 Identity = 264/587 (44.97%), Postives = 365/587 (62.18%), Query Frame = 0 Query: 135 MAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVAGEDD----YNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 M G+ +V+++ P + DKP+ L+ +DD+ Y+ G + + DSD EVYA L+ + M KK MEVL P+DH++++Y PFRK FY H + + + +E+ R +EL V+V+G + P+ SF H GF +L+ ++K G EAPT IQ+QA P+ALAGRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ KA + R T +VLDEADRMF++GFEAQL SV+GQ+RPDRQTL+FSATF+R++E LA +VL +PV+++ G+ GQANED+ Q VVLP AK+ WL + LV EG++L+F SK GCE+LA L A++ P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++ V+NFD+A+N++ HVHR GRTGRM +E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 1 MQGIDAQVKQQRATPKRVA-DKPQVLNH---------------ADDDADSYLEEYARGTKNPRMGQDEDSDEEVYATAKQ--------------------LDTAEAPDEM---AKKVMEVLAPIDHSTVEYEPFRKHFYTPHSETSALSGQEVAAIR-KELSVKVDGADVAAPVRSFMH-LGFDRKMLQTLMKLGLEAPTAIQSQAFPVALAGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLGVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEMGFEAQLRSVMGQVRPDRQTLMFSATFRRRIESLALDVLTNPVKLIIGQVGQANEDIRQIAVVLPGHGAKWPWLMSRMRSLVDEGRLLIFAGSKAGCEELAKNL---------ATAFPAAPALCLHGDKTQQERA-----------------EALSKFKHGECRVLVATDVAARGLDVKDVKTVVNFDVAKNIDTHVHRIGRTGRMGLE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQSVSAELLAL 519
BLAST of NO12G00490 vs. NCBI_GenBank
Match: XP_009526657.1 (hypothetical protein PHYSODRAFT_300617 [Phytophthora sojae] >EGZ17599.1 hypothetical protein PHYSODRAFT_300617 [Phytophthora sojae]) HSP 1 Score: 469.5 bits (1207), Expect = 2.100e-128 Identity = 266/583 (45.63%), Postives = 361/583 (61.92%), Query Frame = 0 Query: 135 MAGVQNKVQEEAQKPSQAPWDKPEYLDEEAAEEDENAREEGTFSDDEGGDYMRRRVAGEDDYNYDSDAEVYAAXXXXXXXXXXXXXXXXXXXXXXGLEPGKKYSRMGPEGKKAMEVLPPLDHASIDYPPFRKCFYEEHPDVTEMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSEILLREIVKRGFEAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPAIVHLMDQPHIQRGDGPIVLILAPTRELASQIYVEATKFSKPHGAKAAAIFGGAGKWEQTKLLKEGVEILVATPGRLLELLKTKATNLKRCTMLVLDEADRMFDLGFEAQLHSVLGQIRPDRQTLLFSATFKRKVEKLANEVLQDPVRVVCGKAGQANEDVTQEVVVLPNEEAKYQWLAHCLPGLVREGKVLVFVSSKQGCEDLAGRLTILLQADARASSLPPWKVEALHGDKDQHERSLIXXXXXXXXXXXXXXXXXXXXXXXGACRVLVATDVASRGLDIKDIRNVINFDMARNMEAHVHRCGRTGRMTVEGGREGGKAFTLLTPRDSGMAGEMVKGLEGARQKVPAALRAM 718 M G+ +V ++ + P + DKP+ L E + D E + ++ AG N DSD EVYA L+ M KK MEVL P+DH+++ Y PFR+ FY H + + + +E+ + R EL V+V+G + P+ SF H GF +L ++K G EAPT IQAQA P+AL+GRD++GIA+TGSGKTLAF P + H+MDQ +QRG+GPI ++LAPTRELA Q YV+A KF +GA AAI+GGAGKWEQ + LK+GVE++VATPGRL+E+++ K + R T +VLDEADRMF++GFE QL SV+GQIRPDRQTL+FSATF+R++E LA +VL++PV++ G GQANED+ Q VVLP AK+ WL + GLV EG++L+F SK GCE+LA L A++ P LHGDK Q ER+ G CRVLVATDVA+RGLD+KD++NV+NFD+A+N++ HVHR GRTGRM +E G E G A+TL+T +S A ++V ++ + Q V A L A+ Sbjct: 1 MQGIDAQVTQQRKAPPKRVADKPQVLKHEDDDADSYLEEYARTT--------KKPRAGLSSGNDDSDEEVYATAKQ--------------------LDDADAPDEM---AKKVMEVLAPIDHSTVRYEPFRRNFYSLHSETSSLSNQEVAKLR-LELSVKVDGSDVPAPVQSFMH-LGFDRKMLHTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVCHVMDQRELQRGEGPIAVVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKTAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQIRPDRQTLMFSATFRRRIEALALDVLKNPVKLTIGLVGQANEDIRQIAVVLPGHGAKWPWLMARIRGLVDEGRLLIFAGSKAGCEELAKNL---------ATAFPSAPALCLHGDKTQQERA-----------------EALSKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGLE-GFEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLAL 523 The following BLAST results are available for this feature:
BLAST of NO12G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00490 ID=NO12G00490|Name=NO12G00490|organism=Nannochloropsis oceanica|type=gene|length=2555bpback to top protein sequence of NO12G00490.1 >NO12G00490.1-protein ID=NO12G00490.1-protein|Name=NO12G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=844bpback to top Synonyms
Publications
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