NO12G00480, NO12G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00480 vs. NCBI_GenBank
Match: EWM25972.1 (twist neighbor [Nannochloropsis gaditana]) HSP 1 Score: 214.5 bits (545), Expect = 4.800e-52 Identity = 110/175 (62.86%), Postives = 134/175 (76.57%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREKGEEPRESVYG 216 V+FKLALLP AM ++E+ + KLH +LMKYN+D GG+LL + +R PP+RRFA+++ DLP LHV+VEA +LVFTP PG +TG VIKVT THVALLVYGLFNAAIAREDMPDA+ + R WV GG + LGE+V FRVV VHEAAGL+ALDGS+RE+G EPR V G Sbjct: 37 VLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGG----KEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGEPRAPVAG 207
BLAST of NO12G00480 vs. NCBI_GenBank
Match: CBJ48455.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.8 bits (299), Expect = 1.600e-23 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGR-FALGEQVKFRVVRVHEAAGLLALDGSM 203 ++LLP + D+ +R ++ LM+YNE GGVLLA+ + R I ++P +H V+A A VF P PG V+ G V KVT THV +LV G+FNA++A E M + F + EW + G G A+G ++F V R+HEAAGL++++GS+ Sbjct: 15 VSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSDLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDMTAREWQRSRGGKHGAGEVIAVGADMQFVVTRMHEAAGLISIEGSL 173
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_009833838.1 (hypothetical protein H257_09342 [Aphanomyces astaci] >ETV76925.1 hypothetical protein H257_09342 [Aphanomyces astaci]) HSP 1 Score: 112.5 bits (280), Expect = 2.600e-21 Identity = 59/163 (36.20%), Postives = 99/163 (60.74%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++ +L P+ ++D ++ + +L+ +LMKY+E GVLLA ++ + I+++ P++HV++ A ALVF PTPG +T V KV H+ LL+ G+FN +IA +MP F + WV G+ A+ + V+FRV++VH A G++++DGSMR Sbjct: 12 LVMSCSLAPYHIQDPKKGLEDQLNHMLMKYSEPVQGVLLAFNSLQ--VINPYGHIINETPYIHVRIAADALVFRPTPGMQLTATVNKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWV-----GKDSSAIAVDDAVEFRVLQVHVAHGVISIDGSMR 167
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_008868760.1 (hypothetical protein H310_05728 [Aphanomyces invadans] >ETW02155.1 hypothetical protein H310_05728 [Aphanomyces invadans]) HSP 1 Score: 112.5 bits (280), Expect = 2.600e-21 Identity = 58/163 (35.58%), Postives = 99/163 (60.74%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++ +L P+ +++ ++ + +L+ +LMKY + GVLLA ++ + I+++ P++HV++ A ALVF PTPG +TG V KV H+ LL+ G+FN +IA +MP F + W+ G+ A+ + V+FRVV+VH A G++++DGSMR Sbjct: 12 LVMSCSLAPYHIQNAKKGLEDQLNLMLMKYCDPVQGVLLAFNSLQ--VINPYGHIINETPYIHVRIAADALVFRPTPGMQLTGTVSKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWI-----GQDSSAIAVDDSVEFRVVKVHVAHGVISIDGSMR 167
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_009833837.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV76926.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 111.7 bits (278), Expect = 4.400e-21 Identity = 59/158 (37.34%), Postives = 97/158 (61.39%), Query Frame = 0 Query: 46 ALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 +L P+ ++D ++ + +L+ +LMKY+E GVLLA ++ + I+++ P++HV++ A ALVF PTPG +T V KV H+ LL+ G+FN +IA +MP F + WV G+ A+ + V+FRV++VH A G++++DGSMR Sbjct: 4 SLAPYHIQDPKKGLEDQLNHMLMKYSEPVQGVLLAFNSLQ--VINPYGHIINETPYIHVRIAADALVFRPTPGMQLTATVNKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWV-----GKDSSAIAVDDAVEFRVLQVHVAHGVISIDGSMR 154
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_008868761.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW02156.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 111.7 bits (278), Expect = 4.400e-21 Identity = 58/158 (36.71%), Postives = 97/158 (61.39%), Query Frame = 0 Query: 46 ALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 +L P+ +++ ++ + +L+ +LMKY + GVLLA ++ + I+++ P++HV++ A ALVF PTPG +TG V KV H+ LL+ G+FN +IA +MP F + W+ G+ A+ + V+FRVV+VH A G++++DGSMR Sbjct: 4 SLAPYHIQNAKKGLEDQLNLMLMKYCDPVQGVLLAFNSLQ--VINPYGHIINETPYIHVRIAADALVFRPTPGMQLTGTVSKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWI-----GQDSSAIAVDDSVEFRVVKVHVAHGVISIDGSMR 154
BLAST of NO12G00480 vs. NCBI_GenBank
Match: OQR95652.1 (nitroreductase family [Thraustotheca clavata]) HSP 1 Score: 105.5 bits (262), Expect = 3.200e-19 Identity = 57/171 (33.33%), Postives = 100/171 (58.48%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREKGEEPRE 212 ++ +L P ++D ++ + +L+T+LMKY + GVLLA ++ + I+++ P++H++V A ALVF P G ++ V KV H+ LL+ G+FN +IA ++MP+ + + WV G AL +V F+V+RVH A G++++DGSMR G+ ++ Sbjct: 9 LVMSCSLAPCHIQDAKKGLEEQLNTMLMKYCDPVEGVLLAFNSVQL--LNPYGHIINETPYIHIRVAADALVFRPQTGMELSAVVCKVGSNHIGLLLNGVFNVSIASDEMPEGYAHSYSDDAWVNEDG-----ATIALESEVTFQVLRVHVAHGVISIDGSMRLVGKSSKK 172
BLAST of NO12G00480 vs. NCBI_GenBank
Match: GAQ79885.1 (DNA-dependent RNA polymerase [Klebsormidium nitens]) HSP 1 Score: 104.4 bits (259), Expect = 7.100e-19 Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 44 KLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDL-PFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREKGEEPR 211 ++ + P ED++ VR L+TLLM+YNE+ GGV+LA + R IL L P++H+ + A LVF P +V+ G V KV H+ LL G FNA+I +++ DAF+Y WV +G S R A+G +V F V RVH+ L+L GS+ G PR Sbjct: 17 RIEMHPSQAEDVKVAVREHLNTLLMRYNEEFGGVVLAYSDV--VLLGRKGRILTTLSPYIHLDLTARLLVFAPAAQNVLAGSVNKVGPAHIGLLALGAFNASIRADEIGDAFQYDPDASAWV----DGSS--RIAVGTEVDFAVDRVHDEGNFLSLSGSLLLPGTGPR 176
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_008614504.1 (hypothetical protein SDRG_10298 [Saprolegnia diclina VS20] >EQC32102.1 hypothetical protein SDRG_10298 [Saprolegnia diclina VS20]) HSP 1 Score: 104.0 bits (258), Expect = 9.200e-19 Identity = 58/163 (35.58%), Postives = 94/163 (57.67%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++ +L P + D ++ + +L+ +LMKY + GV+LA I + I+++ P++HV+V A ALVF PTPG ++ V KV H+ LL+ G+FN +I +MPD + + WV + G LG +V F V+RVH+A G++++DGSMR Sbjct: 21 LVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITL--LNPYGHIINETPYIHVRVAADALVFRPTPGMELSAVVNKVGSNHIGLLLAGVFNVSIDAAEMPDGYTHNFHEEAWVGDDGV-----TIELGAEVAFNVLRVHQAYGVISIDGSMR 176
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_012200532.1 (hypothetical protein SPRG_20002 [Saprolegnia parasitica CBS 223.65] >KDO28795.1 hypothetical protein SPRG_20002 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 102.1 bits (253), Expect = 3.500e-18 Identity = 57/163 (34.97%), Postives = 93/163 (57.06%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++ +L P + D ++ + +L+ +LMKY + GV+LA I + I+++ P++HV+V A ALVF PTPG ++ V KV H+ LL+ G+FN +I +MPD + + WV + G G +V F V+RVH+A G++++DGSMR Sbjct: 9 LVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITL--LNPYGHIINETPYIHVRVAADALVFRPTPGMQLSAVVNKVGSNHIGLLLAGVFNVSIDSTEMPDGYVHNFQEEAWVGDDGV-----TIEFGAEVAFHVLRVHQAYGVISIDGSMR 164 The following BLAST results are available for this feature:
BLAST of NO12G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00480 ID=NO12G00480|Name=NO12G00480|organism=Nannochloropsis oceanica|type=gene|length=996bpback to top protein sequence of NO12G00480.1 >NO12G00480.1-protein ID=NO12G00480.1-protein|Name=NO12G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=332bpback to top Synonyms
Publications
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