NO12G00460, NO12G00460 (gene) Nannochloropsis oceanica

Overview
NameNO12G00460
Unique NameNO12G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5040
Alignment locationchr12:170787..175826 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:170787..175826 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00460.1NO12G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00460.1NO12G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00460 ID=NO12G00460|Name=NO12G00460|organism=Nannochloropsis oceanica|type=gene|length=5040bp
CAAGCCTTCCTCCGACACCCTGACAAGGCGTAATCCAGCTTCAAAACCCA
CCACCACTACCTTTCTTGTATGATGAGGGATACCATTTCGTTTCACAAGT
CACCGCACTTAAGGGGTTTCGTGCCTCTGGTCTTTAACAAGTTGCATCGA
CCGACAGGCCATCACCGCCCGTCGGGCACGACGTCGTCGCTTGTTCAACT
TGGTTGCGTTTCGAAAGGGCGCACGCATGTCAAAGAAGCCAGACACGTGG
GACTTTCGCTTTCTTCCTTCACTTTTCCCGTCGCACCTTCGTCTTGACGC
TGGTCTTCGATGCCGAGGGAGTGCTAGCGTGCTTGCCTTTCGCCTGCCGA
GGTCACATGTTTTCATCACTGTCGCTTTCCCACTTTTCTCATGAACTCAC
CCCCCTCCGGCCCACGCACAGGCGAAAACGAAGAATCGACGCCCCCATGA
AGACATAAAAACGCCGGGGACACACCATCACAAACTAATAGCAGCAAAAA
CTAAATACGCGTGTCTCTCAGgtacgtctcgcgacgcctgcctctgcttt
tccctctccgattcctgctctcgttggtatgacatgacatgacacctcaa
gcaggttgtcacgcgccgttttccttaccctccttgcttccctgtctccc
tctttctcttaatagACACACAGACTGTCCAATAGTCATGAAGCGCTCAT
GCACGTGCTCAAACCTAAGGGAAATGGAGGACTACCCCGACTTGGCCGCA
ACCTCGACCAGCAGGGCCGCCAGCGGCAGAAGCAGCAAGCAACACGTCTA
TTCCTCCTCTTCGTCATTCCTGATGCAAGCACATGCGGCCAAACGCTTCC
ATTCTGAGTCTGGTGTGAGTTTGGGGGGACAATTGAGTGGAGGATCAGTT
TATGCAGGTGCGGCATCAGCAGTGTCAAGAGCAGGAGCAGGAGGAAAAAG
CGCTACCAGAGGCAGTAGAAAAGACGGCGACGACCTCTTCGCTCGGGCAG
AGCTGGCGTTCTTGATACAGACATTGCCTACCAACAGCACAACAGCGACG
CGAATGATTGTTGACTCCTCTACCTCTCCGTGCCCTTCCTCTACCTTCTT
CGCCCCCCTTCCGTCATTATGCAACAACATACCACAACACCAACACCAGC
AACTACAACAAGAAGAAGAAGAACAAGAACGCCAAATAAAAATCCAAGGG
CTCGGCCTCCCTTTCCACACCACCACCGCCTTAGAAGACACAACCCAAAA
GACTTATCTGCTCTCTTCCACACCCCTCTCCTCCCCCCTTCCTCTCCTCC
CTTCCGCCCTTCGTCCTCCTCCGCTGCCGTTCTCCGGCGCCTCGGGCGCT
CCTCATCCCTCACCTGCCTCCCACTCAACCCCTCTTCGTCCCTCCCCTCA
CCTCCTCCCCTTGCCTCGCCTCCATTACCCACGATCAATTTTCCCTCCCT
CAGCCTGAGCCAGAGCAGTAGAAGCAGTACCGACAGCAGCAACAGCAGTG
GCACACCAACACATACTGCCACCACTGCCTCCTTCCCCCCCCCTCCTCGT
TGTGTTCCTCCCTCTCCATCTTCTCTCGCTCTCTTTCAAACTCCTCTTCC
TCCTCCTCTTTCTCAACCACCACCACTACTTCCTCCTCCTCTTCCTCTTC
ACCCTCTCCTTTCAACGGCAGTCTCCCGCCAGTTCTGGACAATGACCCGG
AAAAGGCAGAGGAAGAGGAAGAGGGGAGGGAAGAACGAGGGCGCAGAGAC
CTATTGGATTCTGTGACTCTAAGTGCAGCACGACAAACATCACTGAAAGC
AACGTCATCCTCGTCGTCCTCGTCGTCCACGTCTTCCTGGACCAGCAGAG
GAGCTTCGGAGGGAGAAGAGGAGGAGGAAGAGGAGGAGGAAGGGCAGATT
AAGATATTGGGGCTTCCCAGTCCACCCAATAATTTGGTAGGTGCGGACGA
GGAGGGTGGCAAGGACAGGAGGGTTGGAGGGGACGAGGTGGGGGAGGGAA
TGCGACCACAAGTGGCTTTAATCCAACCCGGAGGTCAAGGAACTAGAAGC
AGGGAAACGGTTGATTCCTTTCACCCATCCTGCCCTGCCTCCCTCGCTGC
CTCCTCCGCCACCGCCGCGATCGCCCAGGCGGACGCTCTATTGAACCAAC
TTCGACACATGCGCCTCGCGGATCGAAACTGTCCCTCCTTCCCTCCCTCC
CTCCCTCATTCGCACCCTTCCCCCTCCTCTCCCTGGGCACGTCATGGGAA
GGGACTGGAGGCTATAACGTTTTATCCCTCCTCCTCTCCCTCCTCCTCGC
TTACCTTCCCTTCCTCCTCAGCGAAGGTATAAAGGCGAAAGGGAGGGGAG
GGGGGAGGGAGGGAGGGATAGAGGGAGGGAAGGAGGGGCATGTGAAGAGA
TCTAAGTCGTCCTCCCATCCTTTCGCGAAAGGCGGACATGAGAAAGGGAA
GAGGGAGAGGACAACGGGAGGAGAAGGAGGAGCCGAACTTGAGGAATGAT
GATGGTGATTTTATTTCTCTATGTGTATACCCTCCTTCCATTCCTCCCTC
CCTCGCTACCTATTTAAATAATGGATGTGTATGCATGTATGTGTGATTTT
GATGATTTTGATACGAGAAGAGAGGTCGCATGGGGGTGGACGGAAAGGAA
GAAGACAGAGCGGGCGGGTAAGGGGGGAGGAAGTGACCTTCTAGAGAGGG
AAGAAAGTGAAAATATTTTTGGAAGGAGGGCGGGAGGGAGGAAAGGAGAG
GGCAGGTGTGTGTTTATTTTGAAAGTCTTTTAAAGAAGAAAGGAAGGGAA
AAATTCTCCATTTCGGACAGTGAAAATTATGGGGAAAGGAGAGGTTTTTA
ATGGGAGACGTAAGAGACAAAGCGATAGATAATTGAGAGAGCAGACGCAG
ACGCCGCAGCAGCAGCAGCAGCAGCAGCAATCGCTGCACACAATAGAAAA
TGATGCTAATGAGACCAAGAACAACAACAACACCAACAACAACTCTAGCA
GGGAAGGAGGGGACCAAGAGAAATGGAAGAGAAAGAGACAGATACACACT
ATTTTAATTGCTCTCCCTCAGTCCGTCCCTCCGTCCCTCCCTCTCTCCCA
CTCCCCCTCCTCATATGTGTGTATGATTCCTCTTTATTAAAAAACAAAAA
CTTTATCTTCTTTGAGCGCGCTATTGCTCTCGCAGGTCAAAAAGCTGAAG
CCACAAATAATAAAAAGGATAACAGCAGCAGCATCAGCTTTTGCACCACC
AGAGATAGCAGCAAGAGTGACAAAAGGTGAATAATTTTGAATTGGAAAAA
CATATTTTGACCTTCATCTCTGTCACTCTCAAAGTAAATTTGTATTTGGC
AACAGCAGCAGCAGCAGCAGCAGCATGTGAATGAGGAAGTGGGAGCAACG
AAGACAAGAAGAGGAAACATAAACGAGAAAAGAATGAAATATGACGACAA
GGACACCTGCCCCATCTCGTACCCACACTCACCTTCCTCTCGTCAAACCA
TCCCCAGCATTTCTTCATTTGTTATTTTTTTTTATCCTTCAACCAACGTT
TCTACGACATTTTCTTTGGACCTCCACCGCAAATACGCACCCACGAAGTC
ATCCAGGCCCTCCCCCCCCTCCAAGACGCTCGCTACATCCACGGTCTCCC
TCTCCGTCCGCGTGTCTTTGACCAGCTTATAAGGATGCAAAACGTAATTC
CGGATCTGCTGTCCCCAGCTCGCCTCCACTAGGTCTCCTCTAATCTCCGC
CAGCTCCTCCACCCTCTGCTCCTCCTTTACCACCAACAGCTTCTCTTTCA
ACATATCCATCGCCTTCTTCCGGTTCAGCAACTGCGAACGTTCTTCCTGA
CACCTCACAACCAAGCCCGTCGGCAGATGCTTCAGCCGCACGGCCGTCTC
GACTTTGTTAACGTTCTGACCCCCTGCCCCTCCAGCCCTTGACGTGGTCA
TCTCCACGTCCCCCTCCTCAATCACCACCTCCTCCAACGCCTCCTCGGAC
AAGATCGGCATGGTCTCAACCCCTGCAAAACTCGTCTGCCTCTTGCCTCC
ACTGTTGAACGGACTGATTCTCACCAGCCGATGCGTCCCCTTCTCCGCCT
TCAGAAACCCAAACGCCATGTCTCCCTCCACCTCCACCATCGCACTCTTC
ACCCCAAAACCCTCCACCGGCACGCTCATTTCAACTACCCTCACCTTCCA
CCCCTTCCTCTCCCCGTACCTCGTGTACATCCGCAAAAGCATCCCTGCCC
AATCACTCGCATCTGCCCCCCCCACCCCTGCCGTAATCAGCATACGACAT
CCACATCCATCATAAGGTCCAGATAAAAGTCTCTCCACTTCCCACCTCTC
CAAGTCCTCCATCAACTTCCGCAAGCCCTCCCTCCCTTCCTGCCCCCACA
CCTCGCTCTCCCCCCCTTCCTCCTCCTCCCACAACAACAATGCCGTCTCC
GCATCCTCCACCATTTTCTCCCATCCATTCACCCGTGCCACGATGCCTTT
TAATCGCGTTAATTTAGTAAGAACTGCCCGGGCTTTTGCCGGCTTGCTCC
AGAAACCTTCCTGGGCGGCCTCTTGCTCGTAATAATTGATTTCTCCTTCG
AATTTAGCTAGGTCTAAGGAGGCGGTGTTCGCTTGGACGGAAGCTTTGGC
TTCAATTAGCAGGCGCTTGAGCTCACCGGGATCGGAGATGGGGGCGGAGG
AGAAGGAGAGGGAGGAGGATGAGGAGGAGGAGGGGGAGGATGGGGAGGCT
GAGGAGAAGGAAACCATCAGTGCTCGCGCTCTTCTTATTCTAGGAATTGG
CGCAGATGGCTCGGTGCTACTGCTGCTGCTACTGCTGCTGCTACTGCTGC
AAGAGAAGAGGGAGGACGTTGGCAAAGGGAGGCAAAAGGCGTTGCATGGT
CTCACTTCCAGGAGGATGCATGCGGAAAGGAGGAGGGGAAGCAGGCCGTA
GGGTCTTGGTCTTCTCCGTCTGCTCCTTACATGGCCACTGCTTGCCCCAG
GCCTTATGACCGTCATTATCAAGGCAACTTTGCGTCTGTT
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protein sequence of NO12G00460.1

>NO12G00460.1-protein ID=NO12G00460.1-protein|Name=NO12G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MKRSCTCSNLREMEDYPDLAATSTSRAASGRSSKQHVYSSSSSFLMQAHA
AKRFHSESGVSLGGQLSGGSVYAGAASAVSRAGAGGKSATRGSRKDGDDL
FARAELAFLIQTLPTNSTTATRMIVDSSTSPCPSSTFFAPLPSLCNNIPQ
HQHQQLQQEEEEQERQIKIQGLGLPFHTTTALEDTTQKTYLLSSTPLSSP
LPLLPSALRPPPLPFSGASGAPHPSPASHSTPLRPSPHLLPLPRLHYPRS
IFPPSA*
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Synonyms
Publications