NO12G00340, NO12G00340 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00340 vs. NCBI_GenBank
Match: EWM25982.1 (adhesin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1323.5 bits (3424), Expect = 0.000e+0 Identity = 952/1338 (71.15%), Postives = 1086/1338 (81.17%), Query Frame = 0
Query: 524 PTKVTSPKGPPVYNAAAAGHWKDVPAVEVTVSSYEDDDGASCSLDSDSPSCNLRAALTFVGNRKGTIYLPTVEVHKLKKGPVMVPMYAHVTITSAGTFAQKKAVIYHRESMTFGGGNTGLLMVPMNTSLTLDAVTFKNNPRRAVYGDRGANITILNCAFVNGTFDGDGAAIRVDAGNLHVKQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSDGGAMEMAESTGNVHDCIMEYNTASSGGCMKLVGSNITFSGVEFRKNSCRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGEGGYLDTYLGTFTNHTSYAGPVIHVINTTTKVNSTMFTMNQAATQGGALWIQNSEFSSWNTTFYRNQANKGGAVFIQNELTVEDLERPKFAARHIRFVESMFLENVATEAGGAIEMSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNSTVELEDCLITGNIGENNAGGFWLESSNITATDSRFEHNEANARDGGAIFNYDTDAKFRGCSFSDNSARRGPDLYNHGGLVQVFCAHIGEIYNKPKVGGHITQDCFPCPNGQYGDYASAGSLICETECKVTSKAMDCYTCPNELACDGQRTCKPGYRGEQCMDCKGGFVKVDGQCQPMAAMAIAVIASFFTMGAFILYLVRGPVLDANQFTRVKIVWSLLQLLVMVGLIHNAFGIAVPFFLGLLKPLAMWFDIGTLGSMAKHSFAWVHICNLFFPILILIVLIKAQAMLYKRKMNALEHDVI-DALVWLKHERRIGQFTLLFAELSWAPILYQAAKPFQCFDTAHGSALVWEPSVQCGGTAGQFVLRGLSIMAFVVVGVVFPMVLRYILVTLNQQDRLNHPATREIYKALYESYVEEHIFFDLIFLGVRAALLLPLLTARNGFVQSMVMLSMMGLYYFYYRGNNPFIQFEDQDDVEHPNLHYRAEESKVGVITFWLVAAAIGTKSEDMVEICGWMFVVLNIIVLAFVFRNLVLGIMNVNKEPDTEDVVFIRDGMRLDPAVEREKSVD-IFTQGGWQGFLANFFPFTSAFPSSPSSPASLPTHARADGKEGGTSVSFSSLSSVRAYLGSTSSKRGLQVEGMEGWKDTGKEGGMEGEERTKSGSFAAAGVEKDDVGVAICIGESPR 1860
P K T K P Y+ AA HWK+VPAV+VTV++YED+DGA CS DSPSCNLRAA FVGNR+GTIYLPT+EVHKLKKGP+MVPMY+H+T+TS GT AQKKAV +L+VP NT+LTLDAVTFKNNPRRAVYGDRGA+I++LNCAFVN TFD DG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WSDGGAME+ ES G+V+D IME NTASSGGC+K++GSN+TFSG+EFRKNSC+NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FGEGG+LDTYLG FTNHTS AGPV+HVINTTT +NS+ F N+A + GGALWIQNSEF +WNTTF RN+A KGGAV IQNE+T EDLE P+F R I+FVES FLEN+A+EAGGAIEMS XXXXXXXXXXXXXXXXXXXXXXXXSSNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNS++++++C+I GN+G NNAGGFWLESSN+TAT S F+ N A ARDGG +F+Y+TD+KFRGC F NSAR+GPDLYNHGGL +VFCAHIG +YNKPKVGGH+TQDCF CPNGQYGDYASAGSL+CE EC VT+ AM CY CPN ACDG R CK GYRGEQCM CKGG+VK+DGQCQP+AAMAI V+ FT+GAF+ YL+RGPVLDANQFTRVKIVWSLLQLLVM+GLI NAFG AVPFFLG+LKP+A+WFD+ T+GS++KHSF VH+CNL FP+LI + L+KAQ +LY+R+M+AL +++ DAL WLKHERR+GQFTLLFAEL++APIL QAAK F C+DTAHG ALVWEPS+QCGGTAGQFVLRGLS++A VVVG+VFP+VLRYI+VTLNQQ+RL HPATRE+YKALYESY+E+ +F+DL+ LG RAALLLPLL R+GFVQ+MVML+ GLYYFYYRGN+PFI+FEDQ D+EHPNLHYRAEESKVGV+TFWLVAAAIG KSEDMVE+CGWMFVVLNI VLAFVFRNL LGI NVN+EPD +V+ +RD + DP+V++ D +FTQ GW+GFL +F F ++ P +PSS + T+A++ G S S V A ++ G EG G+EG GE A G + D GVAI IG +PR
Sbjct: 304 PKKRTPTKKRPSYDPTAAAHWKEVPAVKVTVNAYEDEDGAVCS--RDSPSCNLRAAFVFVGNRQGTIYLPTMEVHKLKKGPIMVPMYSHITLTSVGTTAQKKAVXXXXXXXXXXXXXXXVLVVPENTTLTLDAVTFKNNPRRAVYGDRGADISVLNCAFVNNTFDSDGGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASLKTYQSIVNISGSHFGGGTAWSDGGAMELVESMGDVYDNIMELNTASSGGCVKVIGSNVTFSGIEFRKNSCKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFAINNTVIAEDGGAAIFGEGGFLDTYLGVFTNHTSEAGPVVHVINTTTSLNSSTFRFNEAVSLGGALWIQNSEFVAWNTTFLRNRAQKGGAVLIQNEITEEDLEVPRFTPRRIQFVESFFLENIASEAGGAIEMSLAEXXXXXXXXXXXXXXXXXXXXXXXXSSNATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNSSLKVDECVIRGNVGANNAGGFWLESSNMTATGSTFDSNVAEARDGGGVFSYNTDSKFRGCVFGSNSARKGPDLYNHGGLAEVFCAHIGRVYNKPKVGGHVTQDCFTCPNGQYGDYASAGSLVCEQECDVTATAMSCYECPNGWACDGARDCKAGYRGEQCMGCKGGWVKIDGQCQPIAAMAIVVVIGIFTLGAFVWYLLRGPVLDANQFTRVKIVWSLLQLLVMIGLIRNAFGRAVPFFLGVLKPVALWFDLSTIGSLSKHSFPGVHVCNLLFPVLIFLGLVKAQDVLYQRRMHALRQNLMEDALEWLKHERRVGQFTLLFAELAYAPILNQAAKAFHCYDTAHGPALVWEPSMQCGGTAGQFVLRGLSVIAIVVVGLVFPLVLRYIVVTLNQQNRLFHPATREMYKALYESYLEDRLFYDLVLLGFRAALLLPLLAFRSGFVQAMVMLAATGLYYFYYRGNSPFIKFEDQGDLEHPNLHYRAEESKVGVVTFWLVAAAIGCKSEDMVEVCGWMFVVLNIFVLAFVFRNLALGIRNVNQEPDASEVLALRDELLSDPSVDKGHPNDHLFTQEGWRGFLHSFLTFETSSPFTPSSFRA--TNAQSPKAGGWMSAFLSPAQRVLA-----------RLMGREGGAREGEEGRTAGEVEKAPRKSAVTG--QVDSGVAITIGATPR 1624
BLAST of NO12G00340 vs. NCBI_GenBank
Match: XP_005854849.1 (adhesin-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21516.1 adhesin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1048.1 bits (2709), Expect = 3.300e-302 Identity = 794/1059 (74.98%), Postives = 891/1059 (84.14%), Query Frame = 0
Query: 524 PTKVTSPKGPPVYNAAAAGHWKDVPAVEVTVSSYEDDDGASCSLDSDSPSCNLRAALTFVGNRKGTIYLPTVEVHKLKKGPVMVPMYAHVTITSAGTFAQKKAVIYHRESMTFGGGNTGLLMVPMNTSLTLDAVTFKNNPRRAVYGDRGANITILNCAFVNGTFDGDGAAIRVDAGNLHVKQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSDGGAMEMAESTGNVHDCIMEYNTASSGGCMKLVGSNITFSGVEFRKNSCRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGEGGYLDTYLGTFTNHTSYAGPVIHVINTTTKVNSTMFTMNQAATQGGALWIQNSEFSSWNTTFYRNQANKGGAVFIQNELTVEDLERPKFAARHIRFVESMFLENVATEAGGAIEMSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNSTVELEDCLITGNIGENNAGGFWLESSNITATDSRFEHNEANARDGGAIFNYDTDAKFRGCSFSDNSARRGPDLYNHGGLVQVFCAHIGEIYNKPKVGGHITQDCFPCPNGQYGDYASAGSLICETECKVTSKAMDCYTCPNELACDGQRTCKPGYRGEQCMDCKGGFVKVDGQCQPMAAMAIAVIASFFTMGAFILYLVRGPVLDANQFTRVKIVWSLLQLLVMVGLIHNAFGIAVPFFLGLLKPLAMWFDIGTLGSMAKHSFAWVHICNLFFPILILIVLIKAQAMLYKRKMNALEHDVI-DALVWLKHERRIGQFTLLFAELSWAPILYQAAKPFQCFDTAHGSALVWEPSVQCGGTAGQFVLRGLSIMAFVVVGVVFPMVLRYILVTLNQQDRLNHPATRE 1582
P K T K P Y+ AA HWK+VPAV+VTV++YED+DGA CS DSPSCNLRAA FVGNR+GTIYLPT+EVHKLKKGP+MVPMY+H+T+TS GT AQKKAV +L+VP NT+LTLDAVTFKNNPRRAVYGDRGA+I++LNCAFVN TFD DG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WSDGGAME+ ES G+V+D IME NTASSGGC+K++GSN+TFSG+EFRKNSC+NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FGEGG+LDTYLG FTNHTS AGPV+HVINTTT +NS+ F N+A + GGALWIQNSEF +WNTTF RN+A KGGAV IQNE+T EDLE P+F R I+FVES FLEN+A+EAGGAIEMS XXXXXXXXXXXXXXXXXXXXXXXXSSNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNS++++++C+I GN+G NNAGGFWLESSN+TAT S F+ N A ARDGG +F+Y+TD+KFRGC F NSAR+GPDLYNHGGL +VFCAHIG +YNKPKVGGH+TQDCF CPNGQYGDYASAGSL+CE EC VT+ AM CY CPN ACDG R CK GYRGEQCM CKGG+VK+DGQCQP+AAMAI V+ FT+GAF+ YL+RGPVLDANQFTRVKIVWSLLQLLVM+GLI NAFG AVPFFLG+LKP+A+WFD+ T+GS++KHSF VH+CNL FP+LI + L+KAQ +LY+R+M+AL +++ DAL WLKHERR+GQFTLLFAEL++APIL QAAK F C+DTAHG ALVWEPS+QCGGTAGQFVLRGLS++A VVVG+VFP+VLRYI+VTLNQQ+RL HPATRE
Sbjct: 418 PKKRTPTKKRPSYDPTAAAHWKEVPAVKVTVNAYEDEDGAVCS--RDSPSCNLRAAFVFVGNRQGTIYLPTMEVHKLKKGPIMVPMYSHITLTSVGTTAQKKAVXXXXXXXXXXXXXXXVLVVPENTTLTLDAVTFKNNPRRAVYGDRGADISVLNCAFVNNTFDSDGGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASLKTYQSIVNISGSHFGGGTAWSDGGAMELVESMGDVYDNIMELNTASSGGCVKVIGSNVTFSGIEFRKNSCKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFAINNTVIAEDGGAAIFGEGGFLDTYLGVFTNHTSEAGPVVHVINTTTSLNSSTFRFNEAVSLGGALWIQNSEFVAWNTTFLRNRAQKGGAVLIQNEITEEDLEVPRFTPRRIQFVESFFLENIASEAGGAIEMSLAEXXXXXXXXXXXXXXXXXXXXXXXXSSNATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNCQNSSLKVDECVIRGNVGANNAGGFWLESSNMTATGSTFDSNVAEARDGGGVFSYNTDSKFRGCVFGSNSARKGPDLYNHGGLAEVFCAHIGRVYNKPKVGGHVTQDCFTCPNGQYGDYASAGSLVCEQECDVTATAMSCYECPNGWACDGARDCKAGYRGEQCMGCKGGWVKIDGQCQPIAAMAIVVVIGIFTLGAFVWYLLRGPVLDANQFTRVKIVWSLLQLLVMIGLIRNAFGRAVPFFLGVLKPVALWFDLSTIGSLSKHSFPGVHVCNLLFPVLIFLGLVKAQDVLYQRRMHALRQNLMEDALEWLKHERRVGQFTLLFAELAYAPILNQAAKAFHCYDTAHGPALVWEPSMQCGGTAGQFVLRGLSVIAIVVVGLVFPLVLRYIVVTLNQQNRLFHPATRE 1474 The following BLAST results are available for this feature:
BLAST of NO12G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00340 ID=NO12G00340|Name=NO12G00340|organism=Nannochloropsis oceanica|type=gene|length=6825bpback to top protein sequence of NO12G00340.1 >NO12G00340.1-protein ID=NO12G00340.1-protein|Name=NO12G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1912bpback to top Synonyms
Publications
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