NO12G00320, NO12G00320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00320 vs. NCBI_GenBank
Match: EWM25981.1 (endoglucanase a [Nannochloropsis gaditana]) HSP 1 Score: 269.2 bits (687), Expect = 1.300e-68 Identity = 121/160 (75.62%), Postives = 140/160 (87.50%), Query Frame = 0 Query: 32 LVLALLPLFAVPQSLYGTLPFADEKIQGPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKG 192 LV+A + A QSLYGT PFADEK+QGPQ IPGKVW+A+FD+GG +V+YHSYD NHGSCELNPCTG +A+YKNVFRKDEGASTSYTKPPNGGW GDRF+ NNSQVP+DQMYWGWNA+GNWVR+SLLV++ G+YT+SLFG+SNSGG L LTVDDY G Sbjct: 11 LVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHG 170
BLAST of NO12G00320 vs. NCBI_GenBank
Match: XP_005854847.1 (hypothetical protein NGA_0367900 [Nannochloropsis gaditana CCMP526] >EKU21514.1 hypothetical protein NGA_0367900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 131.0 bits (328), Expect = 5.400e-27 Identity = 64/93 (68.82%), Postives = 72/93 (77.42%), Query Frame = 0 Query: 164 GNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPATDGYHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDFHWKG 257 G+YT+SLFG+SNSGG L LTVDDY G + TA IP TDGYH+W+LF DIAVLP+L G ALL VNVTGI YKEGSQFGNLLW DF +G Sbjct: 8 GDYTVSLFGTSNSGGTLLLTVDDYASHGTEASVTAAIPPTDGYHRWSLFQDIAVLPALRRGPALLTVNVTGIDNYKEGSQFGNLLWLDFVRRG 100
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_051978626.1 (hypothetical protein [Edaphobacter aggregans]) HSP 1 Score: 117.5 bits (293), Expect = 6.200e-23 Identity = 74/193 (38.34%), Postives = 103/193 (53.37%), Query Frame = 0 Query: 47 YGTLPFADEKIQGPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQV---PVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGK---AVTTTATIP-ATDGYHQWALFPDIAVLPSLPPGLALLAVNV 233 Y P+ D+K + PQTIPG V A++D+GG V+YH D NHGS ELNP G+ Y + FR E SYTK N + DR N + P +Q+Y GW G W +S+ V G YT L +SN GG++++ V+ + G+ T A P A +H W L P++ L LP G +LL ++V Sbjct: 5 YKGAPYLDDKQRVPQTIPGVVECAFYDKGGEGVAYHDTDPVNHGSGELNPADGS---YLHEFRMHEAVDISYTKFNN---SPDRTDDNPWTIVLPPANQLYVGWTEPGEWFNISVDVHHAGTYTADLLYTSNRGGSISIDVNGHPASGELKIPTTYNAADPVAWRQWHHWNLAPNLVKL-QLPAGRSLLTIHV 190
BLAST of NO12G00320 vs. NCBI_GenBank
Match: OJV44199.1 (hypothetical protein BGO25_10605 [Acidobacteriales bacterium 59-55]) HSP 1 Score: 115.5 bits (288), Expect = 2.400e-22 Identity = 83/230 (36.09%), Postives = 115/230 (50.00%), Query Frame = 0 Query: 34 LALLPLFA-VPQSLYGTLPFADE-KIQGPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPATDG---------YHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDF 253 +A+ P FA P Y P+ D+ G Q+IPG+V A +D+GG V+YH + KN GS LNP GT Y N FR DEG SYTK N D + Q P Q+Y GW G W +++ + G Y+ L +SN GGA+++ ++ GKA + IP+T +H W L P I L LP G ++L V++ K G+ NL +FDF Sbjct: 1 MAVAPAFAGTPPKGYKGTPYKDDHHPNGAQSIPGRVECALYDRGGEGVAYHDTEAKNLGSGTLNPADGT---YLNQFRMDEGVDISYTKFHNAPDRIDDNPYDLVQPPDHQLYVGWTEPGEWFNVTVQAARAGVYSADLLYTSNRGGAISVDLN-----GKAASGPLNIPSTFNPADPIAWRQWHHWNLAPAIMKL-HLPAGKSVLTVHI-----LKGGNM--NLAYFDF 214
BLAST of NO12G00320 vs. NCBI_GenBank
Match: SPE27393.1 (conserved hypothetical protein [Candidatus Sulfotelmatomonas gaucii]) HSP 1 Score: 113.2 bits (282), Expect = 1.200e-21 Identity = 80/224 (35.71%), Postives = 107/224 (47.77%), Query Frame = 0 Query: 47 YGTLPFADEKIQ-GPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTK----PPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPAT---------DGYHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDFHWKG 257 Y P+ D + GPQ IPGKV+ AY+D+GG V+YH D KN+GS LNP G+ Y N FR +EG SYTK PP D + Q P + Y GW G W +++ VK G Y+ L +SN GG ++L V+ G+ T+ I +T +H W + P I L LA NV ++ EG NL +FDF G Sbjct: 32 YKGSPYEDSRYHGGPQKIPGKVYCAYYDRGGEGVAYHDSDAKNNGSGALNPADGS---YLNEFRINEGVDISYTKMDRNPPI-----DNTQYDKLQPPANMFYVGWTVPGEWFNITIDVKASGWYSADLLYTSNRGGTISLDVN-----GEPATSELKIESTFDSSDPVAWRQWHHWNIAPGI-----LKVKLA-RGTNVLTVHILTEGQM--NLAYFDFKKAG 234
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_105489074.1 (hypothetical protein [Candidatus Sulfotelmatomonas gaucii]) HSP 1 Score: 113.2 bits (282), Expect = 1.200e-21 Identity = 80/224 (35.71%), Postives = 107/224 (47.77%), Query Frame = 0 Query: 47 YGTLPFADEKIQ-GPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTK----PPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPAT---------DGYHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDFHWKG 257 Y P+ D + GPQ IPGKV+ AY+D+GG V+YH D KN+GS LNP G+ Y N FR +EG SYTK PP D + Q P + Y GW G W +++ VK G Y+ L +SN GG ++L V+ G+ T+ I +T +H W + P I L LA NV ++ EG NL +FDF G Sbjct: 4 YKGSPYEDSRYHGGPQKIPGKVYCAYYDRGGEGVAYHDSDAKNNGSGALNPADGS---YLNEFRINEGVDISYTKMDRNPPI-----DNTQYDKLQPPANMFYVGWTVPGEWFNITIDVKASGWYSADLLYTSNRGGTISLDVN-----GEPATSELKIESTFDSSDPVAWRQWHHWNIAPGI-----LKVKLA-RGTNVLTVHILTEGQM--NLAYFDFKKAG 206
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_020710045.1 (hypothetical protein [Acidobacteriaceae bacterium KBS 83]) HSP 1 Score: 112.5 bits (280), Expect = 2.000e-21 Identity = 78/214 (36.45%), Postives = 106/214 (49.53%), Query Frame = 0 Query: 50 LPFADEK-IQGPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPATDG---------YHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDFH 254 +P+ D + G QTIPG+V AY+D+GG VSYH D KN GS LNP GT Y N FR EG TSYTK + D P +Y GW G W +++ V + G Y L +SN GGA+++ V+ G+ VT I +T +H W L P + V LP G ++L V++ +G+ NL +FDFH Sbjct: 1 MPYQDSRHAGGGQTIPGRVMCAYYDRGGEGVSYHDSDAKNSGSGGLNPADGT---YLNEFRMHEGVDTSYTKYHD---AIDNNPFEKVHPPEGLLYVGWTEPGEWFNITVNVPRAGVYAGDLLYTSNRGGAISIDVN-----GENVTGPVAIASTFNKADPIAWRQWHHWNLAPGL-VKVRLPKGKSVLTVHILA-----QGNM--NLAYFDFH 195
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_011523872.1 (hypothetical protein [Candidatus Koribacter versatilis] >ABF42071.1 hypothetical protein Acid345_3070 [Candidatus Koribacter versatilis Ellin345]) HSP 1 Score: 110.9 bits (276), Expect = 5.800e-21 Identity = 82/231 (35.50%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 30 FFLVLALLP--LFA-VPQSLYGTLPFADEKIQ-GPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPATD----GYHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDF 253 FF+ +++P LF+ P S Y P+ D + Q G Q IPGKV+ AY+D GG V+YH D +NHGS ELNP G+ Y N FR EG SYTK D N P D Y GW W +++ V + G Y +SN GG +++ V+ G TT PA +H W + D+ + +L G +L V+V GS NL +FDF Sbjct: 9 FFVAASMIPATLFSQSPSSEYQGSPYHDSRYQAGAQKIPGKVFCAYYDLGGEGVAYHDTDPQNHGSGELNPADGS---YLNEFRIHEGVDISYTKFNRKPNLIDDNPFNKVVPPADLPYVGWTEPSEWFNVTVEVAQTGTYAADFLYTSNRGGTISIDVNGKDATGPLDITTTNDPADPLPWRQWHHWNVAGDLFKV-TLSKGKNILTVHV-----LTNGSM--NLAYFDF 228
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_058186623.1 (hypothetical protein [Terracidiphilus gabretensis]) HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20 Identity = 74/219 (33.79%), Postives = 103/219 (47.03%), Query Frame = 0 Query: 44 QSLYGTLPFADEKIQ-GPQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQVPVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPAT---------DGYHQWALFPDIAVLPSLPPGLALLAVNVTGIYAYKEGSQFGNLLWFDF 253 QS Y P+ D + Q GPQ IPG+V+ AY+D GG ++YH D KNHGS ELNP GT Y + FR EG TS+ K D + + P D +Y GW G W +++ K YT +SN G +++ V+ GK+ T I +T +H W L P++ + L G NV ++ G NL +FDF Sbjct: 11 QSQYKGTPYGDSRYQDGPQKIPGRVFCAYYDLGGEGIAYHDIDEKNHGSGELNPADGT---YLHEFRMHEGVDTSFVKFDRKPDQVDDNPYDRALPPRDMLYVGWTEPGEWFNITVNAAKTETYTADFLYTSNRGATISIDVN-----GKSATAPLGIASTYDSADPVAWRQWHHWNLAPNLFKV-HLDKG-----KNVLTVHILSNGQM--NLGYFDF 213
BLAST of NO12G00320 vs. NCBI_GenBank
Match: WP_020715406.1 (hypothetical protein [Acidobacteriaceae bacterium KBS 89]) HSP 1 Score: 105.1 bits (261), Expect = 3.200e-19 Identity = 72/205 (35.12%), Postives = 99/205 (48.29%), Query Frame = 0 Query: 41 AVPQSLYGTLPFADEKIQG-PQTIPGKVWLAYFDQGGPDVSYHSYDGKNHGSCELNPCTGTNAIYKNVFRKDEGASTSYTKPPNGGWTGDRFSANNSQV---PVDQMYWGWNAIGNWVRLSLLVKKGGNYTLSLFGSSNSGGALTLTVDDYLQKGKAVTTTATIPATDG---------YHQWALFPDIAVLPSLPPGLALLAVNV 233 A+ Y P+ D G Q IPG+V AY+D GG V+YH D KN+GS LNP GT Y N FR +EG TSYTK D+ N +V P + +Y GW G W ++++ V G Y+ L +SN GG + L V+ G++ T TI +T +H W P + L LP G +L V++ Sbjct: 10 ALDHGKYKGTPYHDNHHSGVAQAIPGQVDCAYYDLGGEGVAYHDTDAKNNGSGALNPADGT---YLNQFRMNEGVDTSYTK------FHDQIDDNPYEVIHPPENLLYVGWTEPGEWFKITVEVAHAGIYSADLLYTSNRGGTIALDVN-----GESATLPLTIQSTFNAADPIAWRQWHHWNRAPSLTTL-RLPKGKTVLTVHI 199 The following BLAST results are available for this feature:
BLAST of NO12G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00320 ID=NO12G00320|Name=NO12G00320|organism=Nannochloropsis oceanica|type=gene|length=1873bpback to top protein sequence of NO12G00320.1 >NO12G00320.1-protein ID=NO12G00320.1-protein|Name=NO12G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=257bpback to top Synonyms
Publications
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