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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr12 | genome | chr12:16517..20157 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO12G00090 vs. NCBI_GenBank
Match: EWM26014.1 (hypothetical protein Naga_100150g8 [Nannochloropsis gaditana]) HSP 1 Score: 79.7 bits (195), Expect = 4.200e-11 Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 29 YQSAHD-VTGSGSVRYDEANSVLAAGGAGEDFDDQPTILHLNEDASSRRHRWWVRMAVGVVMVSCLALTTALAI--SNTTGGRSALLRGVTPGSAA 122
YQ+AHD TGSG +S + AG D+DDQPTI+H NEDASSRR RW +RMA+G++M +CL L A+ + S++ GG L RG P A
Sbjct: 2 YQTAHDTTTGSG------VSSSVGAGSGITDYDDQPTIIHTNEDASSRRRRWVLRMAMGMMMTACLVLIGAVVLGKSDSRGGSGLLRRGPGPALEA 91
BLAST of NO12G00090 vs. NCBI_GenBank
Match: XP_005854308.1 (hypothetical protein NGA_0190200, partial [Nannochloropsis gaditana CCMP526] >EKU22047.1 hypothetical protein NGA_0190200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9 bits (167), Expect = 7.400e-8 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 58 DFDDQPTILHLNEDASSRRHRWWVRMAVGVVMVSCLALTTALAI--SNTTGGRSALLRGVTPGSAA 122
D+DDQPTI+H NEDASSRR RW +RMA+G++M +CL L A+ + S++ GG L RG P A
Sbjct: 337 DYDDQPTIIHTNEDASSRRRRWVLRMAMGMMMTACLVLIGAVVLGKSDSPGGSGLLRRGPGPALEA 402
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00090 ID=NO12G00090|Name=NO12G00090|organism=Nannochloropsis oceanica|type=gene|length=3641bp
GAAACTACAGCTCACTTTTGCCACCAAATCTTATGAGCCTGAGGGTCTCC
GATTTCTTCTTCAAGCAAGGCGGGCAGGAAATCAAGCGGACATCCACCAA
GGCGTACTCAAGCAAATAATCGACCTTTTTTACTCAACAATGCTGTGACA
ATGTATGGATTCACGCATTGCAGGAGTCAGTTCCAGGGTCTCGTCCAATC
CAGGCGAGCAAGAAGCGAAGTCGGGGCAAGTGGAGGAGCGAGGTGCAAGC
AAGCGCTCTCCGAGCAGAAACAAGCTTCATCTTGTTCTTTCCCTGGCTTC
TAGATTCACACGCCCGGGCTAAAACATGGTGATGCGCACCGAATTCAGCC
AGGAATGGATATGGAAGTTAATCAAATCATCATTCATGCAGCGACTAAAT
GTACCGGCATGTTAGGGAGATTTTGCCTCTCTCCGCTCCGTGCAGTTAAC
TGCAGTCATGCGGAGGCGTGCTTGGACGCGGCATATAATGTTTCATGGCA
TTCCAGATCTCACTTACTAACCCACTGCCAAAGCACACTCCGCGGCACAT
TAGCACAGTGATTTGGGGAGGTATGACGTATCAATCTGCTCACGATGTTA
CGGGTAGCGGCAGTGTGAGATATGACGAGGCAAACAGCGTCTTGGCCGCC
GGCGGAGCAGGAGAAGACTTTGACGACCAGCCCACGATACTCCACCTGAA
CGAAGACGCCAGTAGCCGCCGTCACCGGTGGTGGGTGCGGATGGCCGTGG
GCGTAGTCATGGTCTCGTGTCTAGCGCTGACCACTGCCCTGGCCATAAGC
AATACGACGGGCGGGAGGTCGGCCTTGCTTCGTGGGGTCACGCCGGGATC
TGCAGCGTTAGCTACCGCCACGAGTGCGGTGGAAGGgtacgtactgttgt
caggatatgcttgaaaaagatgtgtgctttggctgtgaagggcgactatg
ataagtgtgtctggtgccatgaatcgaatcgtacacccctttacttgctc
attcatatctccaatccaagattcacttacactcatacttccccttaccg
tacttcttcctcacacaacagTTCTCCCTCGCCCTGTGGCTGCTCCTGCG
GATGTGAAAGCAGTGGTAGCTGTGGTTGTGGCTCCTCATGTTCGGGCTGC
GGCTCCCCCCAGGACCCCGGCACGATCGCCCTCTCTCTACCTTCCTCCTC
CCTGCCTCGGGAAGGGGGTTGCGAAGGCAGCTGTAAGTGCGGTAAGGGAT
GTAATGGCTGTGGCAAAGGCGAGGAGATGATGTCGATGGATCCCGACACG
GATGGTAGTAGAGGCTGTGGCTGCGGCGAGAAGACCAAGGGTGGCAAGAA
GAAGGCGGTGGCGTTTTCGGAGGTTGATGACGAGACTGAGGACGAAGACG
GGGCCGACGTGACAGCGCCGATGTCTCCCCTTGAGCGGGTTGCCTCGCCC
TTGCCTCCTTCTATGGTGGAGCTGGCCCGGAAGAAGAAGCACGAGAAAAA
CCCGCCGAAGCATCACCACCACAAGCACCACCACCAGGCCGAGGACAAAG
CCAAGCCCAAATCGACTACTACTACCACCACCACCACCAAGACCACCACC
ACCACAACCACAGATACTTCGGCTTCTCCTTCTTCTACGGCCATGGAGAG
CAACGGCACTACTGCGGCTGAAAACACCACCGCACCCTTTGACTGGCAAA
AGTACGTCCCTGGTGGCGTGGGTGGTGCCGGTACAGGAGGAGGGGCAGGC
GTCGGCGGCGCTTCTCCCTCCTCATCCTCCTCTCCTTCCTCCTCCTCGAC
GGGGGGTTTTGACTGGTCTAAGTACGTTCCGCCCGGCGTCAACGTAACGA
CCAATACCAACAACGCCACCACTATCTCGTCCTCTCCCGCGCCCTCCCCC
TCCTCCCCTGCTTCGGGCGCCCAGCCAGGTGGACAAGCGCCGTTCGACTG
GTCCAAATACGTCCCACCCGGCGTGAATATCACCATCAACACGAACAACG
GGACAGTCCCGCCATCCCACCCTTCGAACTTGAACAGAACAACGGCTGTA
GATGCCCTAGACACTGCCACGGCGGGCACTGTCGTCCTCGGTTCTTCCTC
GGCTGCCACTGCTACGGCCTCCCCTCCCTCCCCCGGTGGCTTCGACTGGA
GCAAGTACACCAACGGCGGAGGCGCCAGTGGAGGAAGCCCTGCTGCTGGG
GGCGGCAGTCACCCCTCCGGCCCTCCCTCCAGCCCTCCCTCCGGCTCCCC
CTCCTCCTCCTCCTCGGGAGGTGGTGGCCCCGGCGGCTTCGATTGGGGCA
AGTACACCAACGGCGGTGGTGGTGGAGCTCCTTCTGCTGCTCCTGCTGCT
CCTGCTGCGACTCCCAAGAAGTCGAAGAAGGGAGACAAAAAGAAGGAATC
CGCACTAGCAGCACCAGCAGCACCAGCAGCGTCTGCTCCCGCGGCGGGTC
CGGGCGGTGACTGGTCTCACTACATTCCTAGCAGCGCCGGCGGGAGCAGC
GCGCCCACCAAGCTCTTCGAGGTGACCCCTTCCTCCCTTTCTCCCTCCCC
CGACAAAGTCCCTCCCCCCCCCCCGTCGAGATGGAGGGCCCTCCCCAGCC
CGACAGCCCGTCCTCTCTCCATTCGTCGCCCTCAATGCACTTCCCCTCGC
CCGAGATGCCCGAGCAACCGGCGCAGAGGGAGCAGCCGGAACAACAGCCG
CAACAGCCTGGAGGAGGAGGAGGGgtgagtctttaagacgaggggcagga
ggaagggaaagaacgaggggcatttgactgactgttcgtcttgacccaaa
caatcaacagAGCTGGTGGCCCTGGTACAACAGCCAGAACTCGGCCAAGG
AGGAACAGCAGgtaaagaggaagggatgaagggcagccctgaactagggg
gttggtgatatggatgccaaggactcgttatctcttctctgcactgacgc
ccacacacaccccgtctcctctcctgactccctccctcccttccacagCT
GGGCTCGGCGACGGACGCCCACCTGGGGACTGACTGGTACGACTGGCGTG
GCTGGCGACAGGGCACAACGCAGGACGAGGGCGAGAGGGAGGGAGCGGGA
GAGGGAGCGACGACGGGTGTGGTGGTTGCGGCGGTGAAGGGAGAGCAGCC
AGAGCAACCGGAGCAGAAGCAGCAGCCGTAGGAGAGATTGGGAGATGACA
AGATGTGTGTTGTCTGTGTGCATGCACATCGCTTTTGTGTAGTAGTGGCT
GATTGATTTCAGTTTCTTTGTTGTGTGTCTTGCCATAGATATGGACGGAA
AGGAAAGACGAGACGGTTGAGGGTTGGAGATAGAGAAGATAGAGAGGGGG
GTTGAAGATGACGGAGAGAGGGAGGGGGATAGGAGGGGGGGGTAGCGTGG
CTTGTGGGAGTTGAGTGAGTGCCGTGACTATGAGAAGACAGGAGGGAGGG
GGAACAGCCGAGAGAAAGCCATGACGGAAAGAAACGGGAGCTACAGACAC
CACGAAAACAGGGAGAGGGAGTGGCTCTTGTGCATGGATGCCAGTTGCCA
AGGCCAGGCGAAAGATGCGGTCATTCGACAGACTTCATGACCCGACAAAG
AGAAAGAATGATGGACTAGGGAAACTCCCACGACGACGACG back to topprotein sequence of NO12G00090.1 >NO12G00090.1-protein ID=NO12G00090.1-protein|Name=NO12G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=745bp
MAFQISLTNPLPKHTPRHISTVIWGGMTYQSAHDVTGSGSVRYDEANSVL
AAGGAGEDFDDQPTILHLNEDASSRRHRWWVRMAVGVVMVSCLALTTALA
ISNTTGGRSALLRGVTPGSAALATATSAVEGSPSPCGCSCGCESSGSCGC
GSSCSGCGSPQDPGTIALSLPSSSLPREGGCEGSCKCGKGCNGCGKGEEM
MSMDPDTDGSRGCGCGEKTKGGKKKAVAFSEVDDETEDEDGADVTAPMSP
LERVASPLPPSMVELARKKKHEKNPPKHHHHKHHHQAEDKAKPKSTTTTT
TTTKTTTTTTTDTSASPSSTAMESNGTTAAENTTAPFDWQKYVPGGVGGA
GTGGGAGVGGASPSSSSSPSSSSTGGFDWSKYVPPGVNVTTNTNNATTIS
SSPAPSPSSPASGAQPGGQAPFDWSKYVPPGVNITINTNNGTVPPSHPSN
LNRTTAVDALDTATAGTVVLGSSSAATATASPPSPGGFDWSKYTNGGGAS
GGSPAAGGGSHPSGPPSSPPSGSPSSSSSGGGGPGGFDWGKYTNGGGGGA
PSAAPAAPAATPKKSKKGDKKKESALAAPAAPAASAPAAGPGGDWSHYIP
SSAGGSSAPTKLFEVTPSSLSPSPDKVPPPPPSRWRALPSPTARPLSIRR
PQCTSPRPRCPSNRRRGSSRNNSRNSLEEEEGAGGPGTTARTRPRRNSSW
ARRRTPTWGLTGTTGVAGDRAQRRTRARGRERERERRRVWWLRR* back to top
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