NO12G00030, NO12G00030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00030 vs. NCBI_GenBank
Match: XP_005852718.1 (peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526] >EKU23114.1 peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526] >EWM26023.1 peroxiredoxin-2e- chloroplastic [Nannochloropsis gaditana]) HSP 1 Score: 285.0 bits (728), Expect = 1.500e-73 Identity = 136/165 (82.42%), Postives = 152/165 (92.12%), Query Frame = 0 Query: 1 MTKIAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDLE 166 M KIAEG +LPL++I FK+LK+G ATD+TGTDLF GKKVVLFGVPGAFTPTCTNTHAPEYLA Y++FKAKGVDAIYC ASNDCFVTSAWAKSL+AG+K++ILADGDC FAKL+GLTVET GFGGLRLSRFSAL+EDG V KLHLEEGGGY+G SGA+QMLKDLE Sbjct: 1 MAKIAEGQTLPLEKITFKVLKDGKATDLTGTDLF-KGKKVVLFGVPGAFTPTCTNTHAPEYLAMYESFKAKGVDAIYCIASNDCFVTSAWAKSLDAGDKVSILADGDCGFAKLVGLTVETGGFGGLRLSRFSALVEDGSVKKLHLEEGGGYTGVSGAEQMLKDLE 164
BLAST of NO12G00030 vs. NCBI_GenBank
Match: XP_005704203.1 (peroxiredoxin (alkyl hydroperoxide reductase subunit C) [Galdieria sulphuraria] >EME27683.1 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [Galdieria sulphuraria]) HSP 1 Score: 164.5 bits (415), Expect = 2.900e-37 Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 2 TKIAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 T + EG + L +KF+IL+EG +T +F SGKKVVLFG+PGAFTPTC+ H P + K D K+KGVD + C A ND FV WA+S K+ +LADG K +GL ++T FGG+R RFS+LI++ VV K+HLEEG G+SGAS A+ +LKDL Sbjct: 29 TMLKEGSRI-LSDLKFQILQEGKPQVITSDQVF-SGKKVVLFGLPGAFTPTCSRQHLPGFGQKVDEIKSKGVDTVACLAVNDPFVLQQWAESQGVAGKILMLADGGAQSVKKLGLDIDTGDFGGIRCRRFSSLIDNFVVKKIHLEEGTGFSGASSAETILKDL 189
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_013420812.1 (peroxiredoxin [Rhodomicrobium vannielii] >ADP72453.1 Redoxin domain protein [Rhodomicrobium vannielii ATCC 17100]) HSP 1 Score: 162.2 bits (409), Expect = 1.400e-36 Identity = 86/162 (53.09%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFG-GLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 IA G LP KFKI+ DV+ +LFG GKK VLF VPGAFTPTC+ H P ++ D FKAKGVD + C A ND FV AWAKS AG+K+ LADG FAK +GL ++ GFG GLR R++ L+EDGVV LH+EE + AS AD++L DL Sbjct: 3 IAPGTHLP--NAKFKIMTANGPADVSTDELFG-GKKAVLFAVPGAFTPTCSLAHLPGFIEHADDFKAKGVDVVACTAVNDVFVLDAWAKSTGAGDKIVFLADGSGDFAKAIGLDLDAGGFGLGLRSKRYAMLLEDGVVKALHVEENPSVAEASSADRLLADL 161
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_037232978.1 (peroxiredoxin [Rhodomicrobium udaipurense] >KAI96183.1 alkyl hydroperoxide reductase [Rhodomicrobium udaipurense JA643]) HSP 1 Score: 161.0 bits (406), Expect = 3.200e-36 Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFG-GLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 IA G LP KFKI+ DV+ +LFG GKK VLF VPGAFTPTC+ H P ++ D FKAKGVD + C A ND FV AWAKS AGEK+ LADG FAK +GL ++ FG GLR R++ L+EDGVV LH+EE + AS AD++L DL Sbjct: 3 IAPGTHLP--HAKFKIMTATGPADVSADELFG-GKKAVLFAVPGAFTPTCSLAHLPGFIEHADDFKAKGVDVVACTAVNDVFVLDAWAKSTGAGEKIVFLADGSGDFAKTIGLDLDAGAFGLGLRSKRYAMLLEDGVVKALHVEENPSVAEASSADRLLADL 161
BLAST of NO12G00030 vs. NCBI_GenBank
Match: CBN78919.1 (Peroxyredoxin [Ectocarpus siliculosus]) HSP 1 Score: 157.1 bits (396), Expect = 4.600e-35 Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 I EG P+D F+I + DV +++F +GKKVV+ GVPGAFTPTC + H P ++A D FK KGVD + C + ND FV S W KSL+A +K+T+LADG FA+ GL V+T FGG RL R + ++ DG + KL LE+G GY+ S D +L L Sbjct: 47 IKEGDKFPMDS-TFQIKGDAGPADVPASEIF-AGKKVVICGVPGAFTPTCDDNHLPSFIANADKFKEKGVDTVACMSVNDAFVMSRWIKSLDAEDKVTMLADGGAVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDVSSGDTVLAAL 205
BLAST of NO12G00030 vs. NCBI_GenBank
Match: CAQ52405.1 (peroxyredoxin [Laminaria digitata]) HSP 1 Score: 155.6 bits (392), Expect = 1.300e-34 Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 I EG P F+IL +G DV D+F +GKKVV+ GVPGAFTPTC++ H P ++A D FKAKGVD + C + ND FV S W KSL+A +K+T+LADG FA+ GL V+T FGG RL R + ++ DG + KL LE+G GY+ S +L L Sbjct: 3 IKEGDKFPAG-TSFQILGDGGPADVPAADVF-AGKKVVICGVPGAFTPTCSDDHLPSFIALADEFKAKGVDTVACLSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDLSSGAGVLAAL 161
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_054360423.1 (peroxiredoxin [Prosthecomicrobium hirschii] >KPL54255.1 alkyl hydroperoxide reductase [Prosthecomicrobium hirschii]) HSP 1 Score: 151.0 bits (380), Expect = 3.300e-33 Identity = 81/161 (50.31%), Postives = 107/161 (66.46%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 IA G +LP + KF+I+ + A D T ++F G+KVVLFGVPGAFTPTC+ H P +L D FKAKGVD I A ND FV +AWA+ A +K+ LADG+ F K +GL +E G GLR RFS ++EDGVVT L++E+ G + ASGA ++L+ L Sbjct: 3 IAVGSALP--EAKFRIMTDEGAVDRTSDEIF-KGRKVVLFGVPGAFTPTCSMNHLPGFLDNLDHFKAKGVDEIAVVAVNDPFVMAAWARHTGAKDKILFLADGNADFTKKLGLEIEL-GVMGLRSKRFSMIVEDGVVTALNVEDSPGTAEASGAARLLQQL 159
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_008171864.1 (peroxiredoxin [Pseudoalteromonas sp. BSi20652] >GAA61619.1 peroxiredoxin-2E-1, chloroplastic [Pseudoalteromonas sp. BSi20652]) HSP 1 Score: 149.4 bits (376), Expect = 9.600e-33 Identity = 77/161 (47.83%), Postives = 109/161 (67.70%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 I +G +LP ++ L + +T +LF GKKVVLF VPGAFTPTC+N H PE++ D KAKGVDAIYC + ND FV AW S NA +++++LADGD +F+K +GL +T GFGG+R SR++ +I++ VVT L +EEG ++ S A+ +L+ L Sbjct: 2 IEQGQNLP--EVALTQLTDEGMQTLTNKELF-DGKKVVLFAVPGAFTPTCSNAHLPEFITLADKIKAKGVDAIYCVSVNDAFVMKAWGDSQNA-QEISMLADGDASFSKALGLDKDTAGFGGIRSSRYAMIIDNAVVTGLFVEEGKEFA-VSRAEAVLEKL 157
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_099034797.1 (peroxiredoxin [Lacimicrobium alkaliphilum]) HSP 1 Score: 149.1 bits (375), Expect = 1.200e-32 Identity = 77/161 (47.83%), Postives = 105/161 (65.22%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 I G SLP +KF + +G + + + DLF +GKKVVLF VPG FTPTC+ +H P Y+ D KA+GVD + C A +D FV AW+K NAGE + +LADGD +FAK +G+ ++T FGG+R R+S L+ DG V K++LEE G + S A ML+ L Sbjct: 2 IQPGQSLP--DMKFSLRVDGESKEASTADLF-AGKKVVLFAVPGPFTPTCSESHLPGYVTLADKIKAEGVDTVICTAVSDAFVMEAWSKDQNAGE-LLMLADGDASFAKALGMDMDTGAFGGVRSKRYSMLVVDGKVEKVNLEEPGKFE-VSDAQTMLEQL 157
BLAST of NO12G00030 vs. NCBI_GenBank
Match: WP_062475661.1 (peroxiredoxin [Lacimicrobium alkaliphilum] >ALS97145.1 peroxiredoxin [Lacimicrobium alkaliphilum]) HSP 1 Score: 148.3 bits (373), Expect = 2.100e-32 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 0 Query: 4 IAEGHSLPLDQIKFKILKEGNATDVTGTDLFGSGKKVVLFGVPGAFTPTCTNTHAPEYLAKYDAFKAKGVDAIYCAASNDCFVTSAWAKSLNAGEKMTILADGDCAFAKLMGLTVETEGFGGLRLSRFSALIEDGVVTKLHLEEGGGYSGASGADQMLKDL 165 I G SLP +KF + + G +V+ DLF +GKKVVLF VPG FTPTC+ H P Y+A D K KG D+I C A +D FV AW+K NA E + +LADGD +FAK +G+ ++T FGG+R R+S L+ DG V K++LEE G + S A ML+ L Sbjct: 2 IQPGQSLP--DMKFSLRENGEGKEVSTADLF-AGKKVVLFAVPGPFTPTCSEAHVPGYVALADKLKEKGADSIICTAVSDAFVMEAWSKDQNASE-LLMLADGDASFAKALGMDMDTGTFGGIRSKRYSMLVVDGKVEKVNLEEPGKFE-VSDAQTMLEQL 157 The following BLAST results are available for this feature:
BLAST of NO12G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00030 ID=NO12G00030|Name=NO12G00030|organism=Nannochloropsis oceanica|type=gene|length=850bpback to top protein sequence of NO12G00030.1 >NO12G00030.1-protein ID=NO12G00030.1-protein|Name=NO12G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=166bpback to top Synonyms
Publications
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