NO11G03590, NO11G03590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03590 vs. NCBI_GenBank
Match: EWM24833.1 (uncharacterized protein ycf23-like isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 433.0 bits (1112), Expect = 7.300e-118 Identity = 235/280 (83.93%), Postives = 259/280 (92.50%), Query Frame = 0 Query: 1 MRVLTFATVCMASASAFHISMMATPASGPRFHKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRALQRNKVQMQH 281 MR++TF T C+AS SAF++ MATPA+GPRFHKE +RPFREGRAFKVIAGLTNFD +SVGRIARAA +GGATH+DLAADP+LVAL K A RVRT+VSAIDPEKFVPCVEAGVDM+ELGNFDAFY+SGLRFSSLDILDLT+RT+ LCPRTPLSVTIPHVLAMEEQAQLALSLA LGVDVIQTEGAPSISTMSTG+ A+IEKAAPALA+TYVLSRALAG+ T VMAASGMNEVTAPMALVSGA+GVGVG+AI+ LDSEA MATKVREIVRALQRNK MQ+ Sbjct: 115 MRLITFTTFCIASTSAFNL-FMATPAAGPRFHKETLRPFREGRAFKVIAGLTNFDPESVGRIARAAALGGATHVDLAADPDLVALVKKDASRVRTVVSAIDPEKFVPCVEAGVDMLELGNFDAFYASGLRFSSLDILDLTRRTRELCPRTPLSVTIPHVLAMEEQAQLALSLATLGVDVIQTEGAPSISTMSTGIQASIEKAAPALASTYVLSRALAGR-THVMAASGMNEVTAPMALVSGARGVGVGSAITKLDSEAGMATKVREIVRALQRNKAHMQN 392
BLAST of NO11G03590 vs. NCBI_GenBank
Match: CBJ28863.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 242.3 bits (617), Expect = 1.800e-60 Identity = 134/264 (50.76%), Postives = 183/264 (69.32%), Query Frame = 0 Query: 8 TVCMASASAFHISMMATPASGPRFHKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + C+ +A+A A S R +++ PF+ G+A KVI+GL FD D V ++ARAA GG TH+D+A DP+LV AKA V VSA+DPE F CV+AG +M+ELGNFD FY GL FS+ D+L++T++T+AL P TPLSVT+PH L +++Q LA+ L GLGVDVIQTEG S+ G+ AIE+AAP LAA + +S+A++ VMAASG+++VTAPMAL +GA+GVGVG+A++ L+SE M VR I A+ Sbjct: 3 STCVIAAAAALSCADAFCFSPARMSGDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKA-VSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVS---IPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 262
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_015151056.1 (DUF561 domain-containing protein [Oscillatoria acuminata] >AFY84440.1 thiamine monophosphate synthase [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 230.7 bits (587), Expect = 5.500e-57 Identity = 125/235 (53.19%), Postives = 166/235 (70.64%), Query Frame = 0 Query: 37 RPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 R F++GRA K+I GLTNFD D V + RAA GGAT LD+AADP LV LAK Q + VSA++PEKF+PCVEAG D+IE+GNFDAFY+ G RF + ++L LT+ T+AL P LS+T+PH+L +++Q LA L G D+IQTEG S + + G+ AIEKAAP LAA +SRA++ V+ ASG++ +TAPMA+ +GA GVGVG+AI+ LD+E A V+ +V AL Sbjct: 9 RAFQQGRALKIITGLTNFDADKVATVVRAADRGGATFLDIAADPALVKLAK-QLTHLPICVSAVEPEKFLPCVEAGADLIEIGNFDAFYARGRRFEAAEVLQLTRETRALLPNIVLSITVPHILELDQQVDLAEELVKAGADIIQTEGGTSSNPVHPGILGAIEKAAPTLAAASAISRAVS---VPVLCASGISTITAPMAIAAGAAGVGVGSAINRLDNELAAIAGVKSLVEAL 239
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_008314969.1 (DUF561 domain-containing protein [Leptolyngbya sp. PCC 6406]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 124/240 (51.67%), Postives = 165/240 (68.75%), Query Frame = 0 Query: 32 HKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 H ++ F +G+A K+IAGLTNFDRD V + RAA GGAT LD+AAD +LV LAK + VSA+DP+ F+P V AG D+IE+GNFDAFY+ GLRF + ++LDLT+RT+AL P LSVT+PH+L ++ Q QLA L G D+IQTEG S S G IEKAAP LAA +S+ ++ V+ ASG++ VTAP+A+ +GA G+GVG+A++ LD+E AM VR +V AL Sbjct: 4 HTQLQTAFAQGQALKIIAGLTNFDRDRVAAVVRAAHRGGATFLDIAADGDLVHLAKGLTD-LPICVSAVDPDAFLPPVAAGADLIEIGNFDAFYAQGLRFEAAEVLDLTRRTRALLPHITLSVTVPHILPLDAQVQLAEDLVAAGADIIQTEGGTSSQPTSPGTLGLIEKAAPTLAAAREISQVVS---VPVLCASGLSNVTAPLAIAAGAAGIGVGSAVNKLDNELAMVAVVRSLVEAL 239
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_054465739.1 (DUF561 domain-containing protein [Planktothricoides sp. SR001] >KOR37071.1 hypothetical protein AM228_08685 [Planktothricoides sp. SR001]) HSP 1 Score: 224.6 bits (571), Expect = 4.000e-55 Identity = 125/238 (52.52%), Postives = 165/238 (69.33%), Query Frame = 0 Query: 34 EIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 ++ R F+EGRA K+IAGLTNFD SV ++ RAA GGAT LD+AADPELV LAK+ + VSA++ KFVP V AG D+IE+GNFDAFY+ G+RF + ++L LT+ T+AL P LSVT+PH+L ++ Q +LA +L G D+IQTEG S G IEKAAP LAA +SRA++ V+ ASG++ VTAPMA+ +GA GVGVG+A++ L+SE M VR +V AL Sbjct: 6 KLQRAFQEGRALKIIAGLTNFDPTSVAKVVRAADRGGATFLDIAADPELVKLAKS-LTNLPICVSAVEAAKFVPAVAAGADLIEIGNFDAFYAQGIRFEAAEVLQLTRETRALLPEITLSVTVPHILELDRQVELAEALVKAGADIIQTEGGTSSQPAHPGTLGLIEKAAPTLAAAAEISRAVS---VPVLCASGISSVTAPMAIAAGAAGVGVGSAVNRLESEIEMIAVVRSLVEAL 239
BLAST of NO11G03590 vs. NCBI_GenBank
Match: SKB12744.1 (conserved hypothetical protein [Planktothrix sp. PCC 11201]) HSP 1 Score: 223.8 bits (569), Expect = 6.800e-55 Identity = 122/240 (50.83%), Postives = 166/240 (69.17%), Query Frame = 0 Query: 32 HKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + + R F +G A KVI+GLTNF+ V + +AA GGAT +D+AADP LV + + + + VSA++PEKFV CVEAGVD+IE+GNFDAFY+ G RF + ++L LT T+AL P LSVT+PH+L +++Q +LAL L G D+IQTEG S S + G IEKAAP LAA + +SRA++ V+ ASG++ +TAPMA+ +GA GVGVG+AI+ LD+E AM VR +V AL Sbjct: 3 NSSLQRAFDQGNALKVISGLTNFNVGRVASVVKAATQGGATFVDIAADPNLVQIVR-ELTHLPICVSAVEPEKFVTCVEAGVDLIEIGNFDAFYTQGRRFEAAEVLQLTHETRALLPHITLSVTVPHILELDQQVELALELVKAGADIIQTEGGTSSSPVHGGTLGLIEKAAPTLAAAWEISRAVS---VPVLCASGISNITAPMAIAAGAAGVGVGSAINRLDNEVAMVAVVRSLVEAL 238
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_079678847.1 (DUF561 domain-containing protein [Planktothrix sp. PCC 11201]) HSP 1 Score: 223.8 bits (569), Expect = 6.800e-55 Identity = 122/240 (50.83%), Postives = 166/240 (69.17%), Query Frame = 0 Query: 32 HKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + + R F +G A KVI+GLTNF+ V + +AA GGAT +D+AADP LV + + + + VSA++PEKFV CVEAGVD+IE+GNFDAFY+ G RF + ++L LT T+AL P LSVT+PH+L +++Q +LAL L G D+IQTEG S S + G IEKAAP LAA + +SRA++ V+ ASG++ +TAPMA+ +GA GVGVG+AI+ LD+E AM VR +V AL Sbjct: 4 NSSLQRAFDQGNALKVISGLTNFNVGRVASVVKAATQGGATFVDIAADPNLVQIVR-ELTHLPICVSAVEPEKFVTCVEAGVDLIEIGNFDAFYTQGRRFEAAEVLQLTHETRALLPHITLSVTVPHILELDQQVELALELVKAGADIIQTEGGTSSSPVHGGTLGLIEKAAPTLAAAWEISRAVS---VPVLCASGISNITAPMAIAAGAAGVGVGSAINRLDNEVAMVAVVRSLVEAL 239
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_046319167.1 (DUF561 domain-containing protein [Arthrospira sp. TJSD091]) HSP 1 Score: 222.6 bits (566), Expect = 1.500e-54 Identity = 120/237 (50.63%), Postives = 168/237 (70.89%), Query Frame = 0 Query: 35 IMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + + F G+ KVI+GL NF+R +V + +AA GGAT +D+AADPELVA+A+ + VSA++PEKF+PCVEAG D+IE+GNFDAFY+ G RF + ++L LT++T++L P LSVT+PH+L +++Q QLA+ L G D+IQTEG S + + G IEKAAP LAA +SRA++ V+ ASG++ VTAP+A+ +GA GVGVG+AI+ LD+E AM VR +V AL Sbjct: 8 LQQAFNRGQGLKVISGLMNFNRPNVVAVVKAATQGGATFVDIAADPELVAIAR-DLTHLPICVSAVEPEKFLPCVEAGADLIEIGNFDAFYAQGRRFEAPEVLQLTRQTRSLLPEITLSVTVPHILELDQQVQLAIDLVEAGADIIQTEGGTSANPVHPGTLGLIEKAAPTLAAAREISRAVS---VPVLCASGISSVTAPLAIAAGAAGVGVGSAINRLDNELAMIAAVRSLVEAL 240
BLAST of NO11G03590 vs. NCBI_GenBank
Match: WP_011317752.1 (DUF561 domain-containing protein [Trichormus variabilis] >ABA20522.1 Protein of unknown function DUF561 [Trichormus variabilis ATCC 29413]) HSP 1 Score: 222.6 bits (566), Expect = 1.500e-54 Identity = 127/237 (53.59%), Postives = 164/237 (69.20%), Query Frame = 0 Query: 35 IMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + R F GR KVI+GL NFD DSV I +AA +GGAT +D+AAD LV LAK + + VSA+DPEKFV VEAG D+IE+GNFD+FY+ G RF + ++L LTK+T+AL P LSVT+PH+L +++Q QLA L G D+IQTEG S +G IEKAAP LAA Y +SRA++ V+ ASG++ VTAP+A+ SGA GVGVG+AI+ L+SE AM VR +V AL Sbjct: 7 LQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVRLAK-RLINLPVCVSAVDPEKFVTVVEAGADLIEIGNFDSFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQPTHSGSLGLIEKAAPTLAAAYEISRAVS---VPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEAL 239
BLAST of NO11G03590 vs. NCBI_GenBank
Match: CUR13937.1 (conserved hypothetical protein [Planktothrix paucivesiculata PCC 9631]) HSP 1 Score: 222.6 bits (566), Expect = 1.500e-54 Identity = 122/240 (50.83%), Postives = 165/240 (68.75%), Query Frame = 0 Query: 32 HKEIMRPFREGRAFKVIAGLTNFDRDSVGRIARAAGMGGATHLDLAADPELVALAKAQAPRVRTMVSAIDPEKFVPCVEAGVDMIELGNFDAFYSSGLRFSSLDILDLTKRTQALCPRTPLSVTIPHVLAMEEQAQLALSLAGLGVDVIQTEGAPSISTMSTGLTAAIEKAAPALAATYVLSRALAGKGTLVMAASGMNEVTAPMALVSGAQGVGVGTAISGLDSEAAMATKVREIVRAL 272 + + R F +G A KVI+GLTNF+ V + +AA GGAT +D+AADP LV + + + + VSA++PEKFV CVEAGVD+IE+GNFDAFY+ G RF + ++L LT T+AL P LSVT+PH+L +++Q +LAL L G D+IQTEG S S + G IEKAAP LAA +SRA++ V+ ASG++ +TAPMA+ +GA GVGVG+AI+ LD+E AM VR +V AL Sbjct: 3 NSSLQRAFNQGNALKVISGLTNFNVGRVASVVKAATQGGATFVDIAADPNLVQIVR-ELTHLPICVSAVEPEKFVTCVEAGVDLIEIGNFDAFYTQGRRFEAAEVLQLTHETRALLPHITLSVTVPHILELDQQVELALELVKAGADIIQTEGGTSSSPVHGGTLGLIEKAAPTLAAASEISRAVS---VPVLCASGISNITAPMAIAAGAAGVGVGSAINRLDNEVAMMAVVRSLVEAL 238 The following BLAST results are available for this feature:
BLAST of NO11G03590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03590 ID=NO11G03590|Name=NO11G03590|organism=Nannochloropsis oceanica|type=gene|length=1377bpback to top protein sequence of NO11G03590.1 >NO11G03590.1-protein ID=NO11G03590.1-protein|Name=NO11G03590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=281bpback to top Synonyms
Publications
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