NO11G03560, NO11G03560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03560 vs. NCBI_GenBank
Match: EWM24834.1 (adp-ribosylation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 363.2 bits (931), Expect = 4.900e-97 Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQGPRPPSSA 193 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETV+YKNI FTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRF+EAK ELLSLLSE QL+ S ILVFANKADLPTAIPVV+IAQ+LQLDR AKGRHWYIQPSCATTGDGLVEGLDWLS KLKE GPRPPSSA Sbjct: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAGPRPPSSA 192
BLAST of NO11G03560 vs. NCBI_GenBank
Match: EWM24831.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 2.400e-75 Identity = 145/185 (78.38%), Postives = 161/185 (87.03%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQG 186 MG L++RVLD L GK+++R+LMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVE V Y+NISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADR R EA++EL LLSE QL +S +LV+ANKADLP AI V ++A++LQLD VAKGR WYIQPSCA TGDGLVEGLDWLS KLKE G Sbjct: 1 MGQLMTRVLD---VLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182
BLAST of NO11G03560 vs. NCBI_GenBank
Match: XP_002139530.1 (ADP-ribosylation factor 1 [Cryptosporidium muris RN66] >EEA05181.1 ADP-ribosylation factor 1, putative [Cryptosporidium muris RN66] >OII77910.1 ADP-ribosylation factor 1 [Cryptosporidium andersoni]) HSP 1 Score: 232.3 bits (591), Expect = 1.300e-57 Identity = 108/167 (64.67%), Postives = 135/167 (80.84%), Query Frame = 0 Query: 15 LGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKL 182 L GK++ RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR+R +A++EL +LSE +L ++A+LVFANK DLP A+ + + LQL + + RHWYIQ +CAT+GDGL EGLDWLS L Sbjct: 12 LFGKKDMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERINDARDELARMLSEDELRDAALLVFANKQDLPNAMSATDVTEKLQLSNI-RNRHWYIQSTCATSGDGLYEGLDWLSRTL 177
BLAST of NO11G03560 vs. NCBI_GenBank
Match: XP_002142864.1 (ADP ribosylation factor [Cryptosporidium muris RN66] >EEA08515.1 ADP ribosylation factor, putative [Cryptosporidium muris RN66] >OII73476.1 ADP ribosylation factor [Cryptosporidium andersoni]) HSP 1 Score: 232.3 bits (591), Expect = 1.300e-57 Identity = 111/183 (60.66%), Postives = 145/183 (79.23%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKE 184 MG LSR+ + L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHYY + D LIFV+DS DRDR ++++EL+ +LSE +L ++ ++V ANK DLP A+ V ++ + LQL + + R+WYIQ +CATTGDGL EGLDWL+ L++ Sbjct: 1 MGLALSRIWNRLF---GKREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYTNTDGLIFVVDSNDRDRINDSRDELMRMLSEDELRDACLVVLANKQDLPNAMSVTEVTEKLQLSSI-RHRNWYIQSTCATTGDGLYEGLDWLARNLEK 179
BLAST of NO11G03560 vs. NCBI_GenBank
Match: XP_020508130.1 (ADP-ribosylation factor 1-like [Labrus bergylta]) HSP 1 Score: 231.5 bits (589), Expect = 2.200e-57 Identity = 110/171 (64.33%), Postives = 139/171 (81.29%), Query Frame = 0 Query: 12 LSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLK 183 LS L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EAK+EL+ +L+E +L + +LVFANK DLP A+ +I LQL + +GR WYIQ +CAT+GDGL EGL+WLS++LK Sbjct: 9 LSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAKDELMRMLAEDELRDCVVLVFANKQDLPNAMNAAEITDKLQLQSL-RGRSWYIQATCATSGDGLYEGLEWLSNELK 178
BLAST of NO11G03560 vs. NCBI_GenBank
Match: XP_015779045.1 (PREDICTED: ADP-ribosylation factor 1 isoform X2 [Acropora digitifera]) HSP 1 Score: 230.3 bits (586), Expect = 5.000e-57 Identity = 113/184 (61.41%), Postives = 143/184 (77.72%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQ 185 MGG+ + + L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EA++EL +LSE +L E+ +LVFANK DLP A+ +I L L + + R+WYIQ +CAT+GDGL EGLDWLSS+LK Q Sbjct: 1 MGGVFTTL---FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIAEARDELNRMLSEDELREAILLVFANKQDLPNAMNAAEITDKLGLHSL-RNRNWYIQATCATSGDGLYEGLDWLSSQLKNQ 180
BLAST of NO11G03560 vs. NCBI_GenBank
Match: OQR92656.1 (ADP-ribosylation factor family [Achlya hypogyna]) HSP 1 Score: 229.9 bits (585), Expect = 6.500e-57 Identity = 113/186 (60.75%), Postives = 143/186 (76.88%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQGP 187 MG L SRV+D L + KQ+ RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVET+ YKNI+FT+WDVGGQD++R LWRHYY + LIFV+DS DRDR E A++EL +L++ +L ++ +LVFANK DLP A+ ++ L L V +G W+IQ CATTGDGL EGLDWLS+ LK+Q P Sbjct: 1 MGMLFSRVMDRLFS---KQDVRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETLEYKNINFTVWDVGGQDKIRPLWRHYYDNTKGLIFVVDSNDRDRIEMARDELHRMLAQDELRDAIVLVFANKQDLPNAMSAAEMTDKLGLRNVQRG--WFIQACCATTGDGLYEGLDWLSATLKKQAP 181
BLAST of NO11G03560 vs. NCBI_GenBank
Match: XP_002341722.1 (ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500] >EED24335.1 ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500]) HSP 1 Score: 229.6 bits (584), Expect = 8.500e-57 Identity = 111/185 (60.00%), Postives = 144/185 (77.84%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQG 186 MG ++SR+LD L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHY+++ +IFV+DS DRDR EA+ EL +L+E +L ++ +LVFANK DLP A+ + +I Q L L + + R WYIQ +CATTGDGL EGL+WL+ L++ G Sbjct: 1 MGLVVSRLLD---RLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03560 vs. NCBI_GenBank
Match: ORX44758.1 (ADP-ribosylation factor [Hesseltinella vesiculosa]) HSP 1 Score: 229.6 bits (584), Expect = 8.500e-57 Identity = 108/170 (63.53%), Postives = 137/170 (80.59%), Query Frame = 0 Query: 15 LGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLKEQ 185 L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHY+++ + +IFV+DS DRDR EA++EL +L+E +L +S +LVFANK DLP A+ +I L L + + RHWYIQ +CAT+GDGL EGL+WLSS LK + Sbjct: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTEGIIFVVDSNDRDRISEARDELQRMLNEDELRDSLLLVFANKQDLPNAMNAAEITDKLGLHSL-RNRHWYIQSACATSGDGLYEGLEWLSSNLKRR 180
BLAST of NO11G03560 vs. NCBI_GenBank
Match: ELU04506.1 (hypothetical protein CAPTEDRAFT_151740 [Capitella teleta]) HSP 1 Score: 229.2 bits (583), Expect = 1.100e-56 Identity = 110/182 (60.44%), Postives = 141/182 (77.47%), Query Frame = 0 Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVSYKNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFEEAKNELLSLLSEQQLTESAILVFANKADLPTAIPVVQIAQMLQLDRVAKGRHWYIQPSCATTGDGLVEGLDWLSSKLK 183 MG + R+ L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNISFT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EA+ EL+ +L+E +L ++ +LVFANK DLP A+ +I L L + + RHWYIQ +CAT+GDGL EGLDWLS++LK Sbjct: 1 MGNMFERI---FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIAEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRHWYIQATCATSGDGLYEGLDWLSNQLK 178 The following BLAST results are available for this feature:
BLAST of NO11G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03560 ID=NO11G03560|Name=NO11G03560|organism=Nannochloropsis oceanica|type=gene|length=2579bpback to top protein sequence of NO11G03560.1 >NO11G03560.1-protein ID=NO11G03560.1-protein|Name=NO11G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top protein sequence of NO11G03560.2 >NO11G03560.2-protein ID=NO11G03560.2-protein|Name=NO11G03560.2|organism=Nannochloropsis oceanica|type=polypeptide|length=157bpback to top Synonyms
Publications
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