NO11G03490, NO11G03490 (gene) Nannochloropsis oceanica

Overview
NameNO11G03490
Unique NameNO11G03490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3289
Alignment locationchr11:1122342..1125630 +

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin conjugating enzyme
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:1122342..1125630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Homology
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: EWM29163.1 (ubiquitin conjugating enzyme [Nannochloropsis gaditana])

HSP 1 Score: 306.2 bits (783), Expect = 1.000e-79
Identity = 137/147 (93.20%), Postives = 144/147 (97.96%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            MALKR+NKELQD+ RDPPANCSAGPVGDDLFHWQATIMGP+DSPY+G V++LNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQLYRTDR RHDATAREWTAKYAM
Sbjct:    1 MALKRVNKELQDISRDPPANCSAGPVGDDLFHWQATIMGPEDSPYAGGVYYLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRSRHDATAREWTAKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: XP_008610774.1 (ubiquitin-conjugating enzyme E2 4 [Saprolegnia diclina VS20] >XP_012199157.1 ubiquitin-conjugating enzyme E2 4 [Saprolegnia parasitica CBS 223.65] >EQC36012.1 ubiquitin-conjugating enzyme E2 4 [Saprolegnia diclina VS20] >KDO29974.1 ubiquitin-conjugating enzyme E2 4 [Saprolegnia parasitica CBS 223.65] >OQR98652.1 ubiquitin-conjugating enzyme E2 [Achlya hypogyna])

HSP 1 Score: 304.3 bits (778), Expect = 3.900e-79
Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            MALKRINKELQDLG+DPPANCSAGPVGDDLFHWQATIMGP+DSPY+G V+FLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTD NPDDPLVPEIAQ+YRTDR RHD TAREWTAKYAM
Sbjct:    1 MALKRINKELQDLGKDPPANCSAGPVGDDLFHWQATIMGPEDSPYAGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRARHDGTAREWTAKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: XP_008860866.1 (ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyces invadans] >ETW09455.1 ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyces invadans])

HSP 1 Score: 303.1 bits (775), Expect = 8.700e-79
Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            MALKRINKEL DLG+DPPANCSAGPVGDDLFHWQATIMGP+DSPYSG V+FLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTD NPDDPLVPEIAQ+YRTDR +HDATAREWTAKYAM
Sbjct:    1 MALKRINKELLDLGKDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRSKHDATAREWTAKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: XP_002909101.1 (ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >XP_008901465.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica INRA-310] >XP_009529522.1 hypothetical protein PHYSODRAFT_354820 [Phytophthora sojae] >AAN31466.1 ubiquitin-conjugating enzyme [Phytophthora infestans] >EEY57915.1 ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >EGZ15773.1 hypothetical protein PHYSODRAFT_354820 [Phytophthora sojae] >ETI52656.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica P1569] >ETK92544.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica] >ETL45952.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica] >ETL99111.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica] >ETM52261.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica] >ETN13445.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica INRA-310] >ETO81298.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica P1976] >ETP22362.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica CJ01A1] >ETP50243.1 ubiquitin-conjugating enzyme E2-16 kDa [Phytophthora parasitica P10297] >AIY34487.1 ubiquitin-conjugating enzyme [Phytophthora cactorum] >KUF91041.1 Isocitrate lyase [Phytophthora nicotianae] >KUG00959.1 Ubiquitin-conjugating enzyme [Phytophthora nicotianae] >OWZ24467.1 Ubiquitin-conjugating enzyme E2 4 [Phytophthora megakarya] >POM61855.1 Ubiquitin-conjugating enzyme E2 [Phytophthora palmivora var. palmivora] >POM70909.1 Ubiquitin-conjugating enzyme E2 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 302.8 bits (774), Expect = 1.100e-78
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYA 277
            MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGP+DSPY+G V+FLNI+FPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTD NPDDPLVPEIAQ+YRTDR RHDATAREWTAKYA
Sbjct:    1 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPEDSPYAGGVYFLNIYFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRARHDATAREWTAKYA 146
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: OQR93212.1 (ubiquitin-conjugating enzyme E2 [Thraustotheca clavata])

HSP 1 Score: 302.8 bits (774), Expect = 1.100e-78
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            MALKRINKELQDLG+DPPANCSAGPVG+DLFHWQATIMGP+DSPY+G V+FLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTD NPDDPLVPEIAQ+YRTDR RHD TAREWTAKYAM
Sbjct:    1 MALKRINKELQDLGKDPPANCSAGPVGEDLFHWQATIMGPEDSPYAGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRARHDGTAREWTAKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: XP_009830044.1 (ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyces astaci] >ETV80120.1 ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyces astaci])

HSP 1 Score: 301.6 bits (771), Expect = 2.500e-78
Identity = 136/147 (92.52%), Postives = 142/147 (96.60%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            MALKRINKEL DLG+DPPANCSAGPVGDDLFHWQATIMGP+DSPYSG V+FLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALT+SKVLLSICSLLTD NPDDPLVPEIAQ+YRTDR +HD TAREWTAKYAM
Sbjct:    1 MALKRINKELLDLGKDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRAKHDGTAREWTAKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: OEU19455.1 (ubiquitin-conjugating enzyme [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 295.0 bits (754), Expect = 2.400e-76
Identity = 131/147 (89.12%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            M+LKRINKEL DLG+DPPANCSAGPVGDD+FHWQATIMGPDDSPY+G VFFL+IHFPADYPFKPPKV+FTTRIYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQL +TDR RHD+TAREWT+KYAM
Sbjct:    1 MSLKRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDDSPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: BAT25234.1 (host ubiquitin conjugating E2 [Nitzschia sp. IriIs04])

HSP 1 Score: 293.9 bits (751), Expect = 5.300e-76
Identity = 130/147 (88.44%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            M+LKRINKEL DLG+DPPANCSAGPVGDD+FHWQATIMGPDDSPY+G VFFL+IHFPADYPFKPPKV+FTTRIYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQL +TD+ RHD+TAREWT+KYAM
Sbjct:    1 MSLKRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDDSPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDKARHDSTAREWTSKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: XP_002289956.1 (ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335] >EED93493.1 ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 293.5 bits (750), Expect = 6.900e-76
Identity = 130/147 (88.44%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            M+LKRINKEL DLG+DPPANCSAGPVGDD+FHWQATIMGPD+SPY+G VFFL+IHFPADYPFKPPKV+FTTRIYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQL +TDR RHD+TAREWT+KYAM
Sbjct:    1 MSLKRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147
[Close]
BLAST of NO11G03490 vs. NCBI_GenBank
Match: GAX19505.1 (ubiquitin-conjugating enzyme E2 D [Fistulifera solaris] >GAX09620.1 ubiquitin-conjugating enzyme E2 D [Fistulifera solaris])

HSP 1 Score: 293.5 bits (750), Expect = 6.900e-76
Identity = 130/147 (88.44%), Postives = 143/147 (97.28%), Query Frame = 0 
Query:  131 MALKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQLYRTDRGRHDATAREWTAKYAM 278
            M+LKRINKEL DLG+DPP+NCSAGPVGDD+FHWQATIMGP+DSPYSG VFFL+IHFPADYPFKPPKV+FTTRIYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQL +TDR RHD+TAREWT+KYAM
Sbjct:    1 MSLKRINKELVDLGKDPPSNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147
The following BLAST results are available for this feature:
BLAST of NO11G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29163.11.000e-7993.20ubiquitin conjugating enzyme [Nannochloropsis gadi... [more]
XP_008610774.13.900e-7993.20ubiquitin-conjugating enzyme E2 4 [Saprolegnia dic... [more]
XP_008860866.18.700e-7993.20ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyce... [more]
XP_002909101.11.100e-7893.84ubiquitin-conjugating enzyme E2, putative [Phytoph... [more]
OQR93212.11.100e-7892.52ubiquitin-conjugating enzyme E2 [Thraustotheca cla... [more]
XP_009830044.12.500e-7892.52ubiquitin-conjugating enzyme E2-17 kDa [Aphanomyce... [more]
OEU19455.12.400e-7689.12ubiquitin-conjugating enzyme [Fragilariopsis cylin... [more]
BAT25234.15.300e-7688.44host ubiquitin conjugating E2 [Nitzschia sp. IriIs... [more]
XP_002289956.16.900e-7688.44ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
GAX19505.16.900e-7688.44ubiquitin-conjugating enzyme E2 D [Fistulifera sol... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL111nonsL111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR011ncniR011Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008523NSK008523Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03490.1NO11G03490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|620130gene_12008Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100887g2gene5646Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03490.1NO11G03490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03490 ID=NO11G03490|Name=NO11G03490|organism=Nannochloropsis oceanica|type=gene|length=3289bp
AGTCATCACATGGGCCTCCGGACAAAGTTAATTTCGAGTTCTCTGGCCCT
CAGGGAGGGTCAAGGAAAAGAGTCCTTCGCCCCCCCTTTCCCTAATGACG
GTGATGGTCTGATCTCTACGTCATGCCACTGTTCACCCCTTCGACCACCA
CTTAGTCCTCGTACGAACGGTTTCCCATCGGCATCCACCACCGGGGACGT
GCTAAGTGTTTGGCTGGCCGGGTGGCGTCGCTGGGGTTCTAGAGCGAGCG
AAGGGCCAACAACCGCCACCAGCAAACATCATCAATTCTCGCCTTGGCTC
CACACCCACCCACTCACTCACCCACCCGACCTACGCCCGTCCCAACCCCA
CCGTACATATGCACAGAAAGGTCACAGCAACCATTCAACTGACAACAGCA
TGGCGCTCAAGCGGATCAACAAGGAATTGCAGGACCTGGgtgcgtccggg
agggagggcggaagggaacgaacaagaagctggaaggggagagaggagat
ggcttctttggaggtgtacttcgtctggaatgacaccagctacagaccca
cagggctatatgatttcaagcaattgtacatttctgtcgcacgcaaccct
ggctcccgttgtgtccactcaccgctcttttttccccctgtcccttcttc
cccctcttcttctgtcttcctctccccttccttttcgttgtagGACGAGA
TCCGCCTGCAAACTGCTCGGCAGGCCCTGTGGGCGACGACCTTTTTCACT
GGCAAGCCACCATCATGGGTCCTGgtacgtgcttgtccggtggctgcttc
tcccgtcttccttagaattaacctggcctttgttttcttcgctgggccaa
cgtatccccaccctttcatctctcatctcctccctactctatgcagATGA
CTCGCCTTACAGCGGCGCCGTCTTCTTCCTCAACATTCATTTCCCTGCCG
ACTACCCCTTTAAGCCCCCCAAGgtacgtgggctaggtcgggagatacga
cggtttgtcggggggtttcaaaacagccagctctgaagcctgagtgtgcc
tcggcacccacacactctgtccccgccccctctgccacagGTGAACTTCA
CGACGCGTATTTACCACTGCAACATTAACGCGAACGGCGGCATCTGCCTG
GACATCCTGAAGGACCAGTGGAGCCCTGCCCTGACAGTCTCCAAGgtatt
tatgttgcccccacctacccatccatctccgtatctacccacccatccac
ctacctacctatctacccctttatctatccattgtatctagccacataaa
tacgtatctatctacttatctacctacctatctacctacctacaaaccta
atctatatccatgtatctagctacctgaatacttatctatatatatacgg
aggcccatctctccctccctgcatgtcccgcctccgtattttccttcatt
tcagcctacgcatatatcccaaacgccgcaatttagaaaatgacatcatc
aaattggcacacgcataccctccctcacccctccctccgtccctccctcc
gtccttccctccctcgccgtttttcagGTCCTACTCTCCATCTGCTCCCT
CCTGACTGACCCCAACCCAGACGATCCCCTGGTGCCCGAGATCGCACAGC
TGTACCGCACGGACCGGGGAAGGCACGACGCCACCGCACGCGAGTGGACC
GCCAAgtacgtgccgtcgagagggggtcagggagggaggaagggaggggg
gaagggagggagggagggaggggggaagggagggaggatgcaaatgatga
tgggtgggtgtgggggtggttggtgtgtgtatgtgtgtgtctaaaagaga
ggggtggattgggataaccagttcaagacaaaaggtttgaaagcccagga
cgacttgacccgccctttccgtctgtcctgcctccctcacctcacctctc
tccctgccctcctcgctttcttatgacagGTATGCGATGTAGTCGGAGCT
TGGTCTCCTCCTCCCTGATGGACCCCCCCCCCCGAGCAGCACCAACAAGT
ACGAAAATAATCACAAGAAGAAGAGGAAGGTGAAGAATTGAATTAAGGAA
GGAAGGAAAGGAAGGGAGATAGAATGGGAGGAAGGGAGGGAGGGAGAGAG
GGAGGAAGGGGCTTGCCCTTCTAATAAGTGTACATATCATCGTCCATAGC
GTCAGTCTCAGTGAGCAGTCTGTCATGTGGGCCACACATAGAGACAGGCG
CCCAACACGCACTCACGAGAGAGAGAACAGAGAGGGTGCGAGGAGGAGAG
AGAGAGGGTGGGGCTTGGGGAGAAGAGGGAAGGCGGGAATGAAAGGGACG
AGGCAAGACGAAGCAGCCCATACGTCGTGTACGTCCTCGGTGCATTGAGG
ATTGTGGAAGATATCGGGAGGAGTGAGAAGAAGGAGAAAGAAAAAGAGAG
AGGAAACAATGAGGAATGTGGAAGGAGTAGGGAAAAGTGAGAGGAGAAGA
AGAGAGAAAAAGAGAGAGGAAGAGAGAGGAAGGGGGTAAGGACAGGAGTA
TTGTCGGTTTTGATTCAGAGTAGTTTTGAGAGGCAGCATGTCAGTGCTCT
TTCTCTTCTTCTCCTAGTTTAATCGCTATTCCTCTTCCTTGTCCTCTTTC
TGCCTATTTCCTGCGTATCCGTCCTCGTCTCTTTTGCCGGCCTTTATCTT
TGTCTTGTGAGCACTCTGGACGTGGACGTACGGATGGTGGTGATTGGTCT
TGTGAGGATGAGGGCGGTGCAGATGGTGGTGGTTGTGGTGATGATGGTGG
TGGTAAGAAGAAATCACAAAAGAAGCAACGGACGGGCCTTGAAAACATTA
AAAATCGCTGCGACTACAACCAACGCTCTTCCTCCTCCCTCTCCCTATAC
CTATCTCCCTCCCCTGTCGACCTGGAACTATCTCCCTTCCCTGTCGACCT
ACGCTGTTCCGCGACCCCGGCATTGGTGCCAGGTGAATAAATGTTTACAC
ACTCATCACGAGCCTCGCCTTCTCGAGAGCGTCGTGTCTAACGAAGAAAA
CCCAAAAACACACGAACACAAACACACAACACGCACAGCGTGGGGATGCC
GTGCCATTCAATAGTTCTTCCACCGACAGGCATGGACAGGGGCAGGCAGG
CGAGGCTGCTACATTTTAAGAATGAGTTGCTTCTCTTATAATCACACGAA
TGCCTGGATTATATCATTCTTTCGTCCCTGCATGGCTTGCCCCTTTATCA
GCTATACACGTCCTATTCCCTTCACCTCGGCCCATTTCC
back to top

protein sequence of NO11G03490.1

>NO11G03490.1-protein ID=NO11G03490.1-protein|Name=NO11G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MGLRTKLISSSLALREGQGKESFAPPFPNDGDGLISTSCHCSPLRPPLSP
RTNGFPSASTTGDVLSVWLAGWRRWGSRASEGPTTATSKHHQFSPWLHTH
PLTHPPDLRPSQPHRTYAQKGHSNHSTDNSMALKRINKELQDLGRDPPAN
CSAGPVGDDLFHWQATIMGPDDSPYSGAVFFLNIHFPADYPFKPPKVNFT
TRIYHCNINANGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLV
PEIAQLYRTDRGRHDATAREWTAKYAM*
back to top
Synonyms
Publications