NO11G03470, NO11G03470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03470 vs. NCBI_GenBank
Match: EWM24845.1 (sensitivity to red light reduced protein [Nannochloropsis gaditana]) HSP 1 Score: 292.7 bits (748), Expect = 1.600e-75 Identity = 163/339 (48.08%), Postives = 205/339 (60.47%), Query Frame = 0 Query: 54 HQPHGGGLRDTYTSA--DIQCETTRLLAAVEIAKRMLSPTAFYSNLEHALLSRFTSGSGWKTGGREDREVRTLVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLS---------SLPPSPSSP-----------------PLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDESDCILPLLPWMRETLVSWKRKEEXXXXXXXXXXXXXXXXXXXXXXE-----DKVVKSAFVDLCVTDFPNLPL---MEGGEENEDVEEXEELREKILWKRRPPEH 357 HQ H RD S+ DI E +RLL AVE AK L+ T F+ NLE+ALL+R T RE+R+LVCYGLGSIQST+SH LWQLAC CL+KDRL++ LS S PPS SS PL+ AE++DP+FD +D++LL LGW V+PHNE KR A PT+FFMPCCHRRLYSNLLWANWSP+ L+NV++VGN L+SY+ER A E++ D +DC+LPLLPW+RE +SW+ + E D+VVK+AFVD+ V DF NLP GG E +DV ++ LW RRPPE+ Sbjct: 86 HQTHYSRDRDRALSSPEDIAEEGSRLLVAVEAAKSCLASTTFFLNLENALLTRSTKKVADNEEENNTREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLSWRTRTGSGGTTGCWPGMGREEEKGGPKGEARGMDDRVVKTAFVDMRVVDFVNLPPPVGEAGGSEEKDV------AKRSLWHRRPPEY 418
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_012686108.1 (PREDICTED: SRR1-like protein [Clupea harengus]) HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20 Identity = 64/159 (40.25%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 101 LLSRFTSGSGWKTGGREDREVRTLVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKD 260 LL R +SGS G + ++ VCYGLGS ST +QLA LL D L I P+ VYDP+F + LT LG+ VL NE GKR PT+F++ C + LY+NLLW NWS L +L++GN +ERTL E ++D Sbjct: 63 LLGRLSSGSCTGQTGVQSECLQDCVCYGLGSF-STCVSARYQLALLLLLLDALKI------------PVERCSVYDPVFSPTERETLTALGFTVLTENEEGKRAVHQPTLFYLMHCGKALYNNLLWKNWSSQTLPKLLVIGNSFLGIQERTLQRELQRD 208
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_014326111.1 (SRR1-like protein isoform X1 [Xiphophorus maculatus]) HSP 1 Score: 109.8 bits (273), Expect = 1.900e-20 Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 112 KTGGREDREVRT-------LVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 KTGG++D++ VCYGLGS S S +QLA LL D HI PL +YDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NW+P CL V ++GN ERT E ++D S Sbjct: 80 KTGGQQDKDTEATARQQLECVCYGLGSFSSCVS-ARYQLAMLLLLLDAGHI------------PLKDCSLYDPAFSVAEKDILRELGLTVLTENEEGKRLATKPTLFYLMHCGKALYNNLLWQNWNPHCLSLVTIIGNCFSGIRERTFERELKRDYS 223
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_023199930.1 (SRR1-like protein isoform X2 [Xiphophorus maculatus]) HSP 1 Score: 109.8 bits (273), Expect = 1.900e-20 Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 112 KTGGREDREVRT-------LVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 KTGG++D++ VCYGLGS S S +QLA LL D HI PL +YDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NW+P CL V ++GN ERT E ++D S Sbjct: 56 KTGGQQDKDTEATARQQLECVCYGLGSFSSCVS-ARYQLAMLLLLLDAGHI------------PLKDCSLYDPAFSVAEKDILRELGLTVLTENEEGKRLATKPTLFYLMHCGKALYNNLLWQNWNPHCLSLVTIIGNCFSGIRERTFERELKRDYS 199
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_015228529.1 (PREDICTED: LOW QUALITY PROTEIN: SRR1-like protein [Cyprinodon variegatus]) HSP 1 Score: 107.8 bits (268), Expect = 7.300e-20 Identity = 67/172 (38.95%), Postives = 86/172 (50.00%), Query Frame = 0 Query: 106 TSGSGWKTG-GREDREVRTLVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDESDCILPLLPWMRETLV 277 T G+ +K GR R+ VCYGLG+ S S +QLA LL D I PL VYDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NWSP CL V ++GN ERT+ E +D + I + W E L+ Sbjct: 84 TDGNHYKNAEGRTARQHVECVCYGLGTFSSCVS-ARYQLAMLLLLLDAGRI------------PLKDCSVYDPAFSSAERDVLRGLGLTVLTENEEGKRLATKPTLFYLMHCGKALYNNLLWKNWSPRCLPLVTIIGNCFSGIRERTIEREMRQD-YNYISKAVDWCEERLL 241
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_023244184.1 (SRR1-like protein [Centruroides sculpturatus]) HSP 1 Score: 107.8 bits (268), Expect = 7.300e-20 Identity = 66/171 (38.60%), Postives = 91/171 (53.22%), Query Frame = 0 Query: 77 LLAAVEIAKRMLSPTAFYSNLEHALLSRFTSGSGWKTGGREDREVRTLVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSY 248 +L VE K + + FY N + SG G+ R V+ +VCYGLGS+ ST +QLA L+K+ + SS PLL YDP+F LD +LT + NE GKR+ T+FFMP C R LY+++LWANWSPD L +V+L+GN ++ Sbjct: 48 VLKKVEECKAEIRSSDFYLNFYEIFKKCVVTNSGKSEDGK--RNVQNIVCYGLGSV-STSLAARYQLALLLLMKEF----------TGSSNPLL----YDPIFSKLDWKILTRFHCRAIRKNEEGKRKIDGRTLFFMPHCGRPLYNSILWANWSPDGLNDVILIGNSFNNF 201
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_017558289.1 (PREDICTED: SRR1-like protein [Pygocentrus nattereri]) HSP 1 Score: 106.7 bits (265), Expect = 1.600e-19 Identity = 70/196 (35.71%), Postives = 93/196 (47.45%), Query Frame = 0 Query: 69 DIQCETTRLLAAVEIAKRMLSPTAFYSNLEHALLSRFTSGSGWKTGG---REDREVRTLVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 D Q +T R+ AV L F+ L R +G RED + VCYGLG+ S S +QLA LL D L I P+ +YDP+F + +L LG+ VL NE GKR PT+F++ C + LY+NLLW NWSP L V+++GN +ER L E E+D S Sbjct: 38 DRQRDTRRITEAV----NDLRDEDFWLEWRDVLCGRLAESAGHSCTDKTVREDEYLLDCVCYGLGNFSSCVS-ARYQLAMLLLLFDALQI------------PVGQCSMYDPVFTVSEREILRELGFTVLTENEEGKRAVCRPTLFYLMHCGKALYNNLLWRNWSPHILPKVIVIGNSFLGIQERMLQRELERDYS 216
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_007559300.1 (PREDICTED: SRR1-like protein isoform X1 [Poecilia formosa]) HSP 1 Score: 105.1 bits (261), Expect = 4.700e-19 Identity = 60/157 (38.22%), Postives = 80/157 (50.96%), Query Frame = 0 Query: 112 KTGGREDREVRT-------LVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 K GG++D++ VCYGLGS S S +QL+ LL D I PL +YDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NW+P CL V ++GN ERT+ E ++D S Sbjct: 80 KAGGQQDKDTEATVRQQLECVCYGLGSFSSCVS-ARYQLSMLLLLLDAADI------------PLRDCSLYDPAFSVAEKDILRELGLTVLTENEEGKRLATKPTLFYLMHCGKALYNNLLWQNWNPHCLSLVTIIGNCFSGIRERTIERELKRDYS 223
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_008417004.1 (PREDICTED: SRR1-like protein isoform X1 [Poecilia reticulata]) HSP 1 Score: 105.1 bits (261), Expect = 4.700e-19 Identity = 61/157 (38.85%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 112 KTGGREDREVRT-------LVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 KT G+++++ VCYGLGS S S +QLA LL D HI PL +YDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NW+P CL V ++GN ERT+ E ++D S Sbjct: 80 KTEGQQEKDTEATVRQQLECVCYGLGSFSSCVS-ARYQLAMLLLLLDAGHI------------PLKDCALYDPAFTVAEKDILRELGLTVLTQNEEGKRLATKPTLFYLMHCGKALYNNLLWQNWNPHCLSLVTIIGNCFSGIRERTIERELKRDYS 223
BLAST of NO11G03470 vs. NCBI_GenBank
Match: XP_008417005.1 (PREDICTED: SRR1-like protein isoform X2 [Poecilia reticulata]) HSP 1 Score: 105.1 bits (261), Expect = 4.700e-19 Identity = 61/157 (38.85%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 112 KTGGREDREVRT-------LVCYGLGSIQSTDSHPLWQLACACLLKDRLHILLSSLPPSPSSPPLLTAEVYDPLFDGLDTHLLTLLGWHVLPHNEHGKRRALTPTVFFMPCCHRRLYSNLLWANWSPDCLQNVLLVGNRLRSYEERTLASEKEKDES 262 KT G+++++ VCYGLGS S S +QLA LL D HI PL +YDP F + +L LG VL NE GKR A PT+F++ C + LY+NLLW NW+P CL V ++GN ERT+ E ++D S Sbjct: 56 KTEGQQEKDTEATVRQQLECVCYGLGSFSSCVS-ARYQLAMLLLLLDAGHI------------PLKDCALYDPAFTVAEKDILRELGLTVLTQNEEGKRLATKPTLFYLMHCGKALYNNLLWQNWNPHCLSLVTIIGNCFSGIRERTIERELKRDYS 199 The following BLAST results are available for this feature:
BLAST of NO11G03470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03470 ID=NO11G03470|Name=NO11G03470|organism=Nannochloropsis oceanica|type=gene|length=3501bpback to top protein sequence of NO11G03470.1 >NO11G03470.1-protein ID=NO11G03470.1-protein|Name=NO11G03470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bpback to top Synonyms
Publications
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