NO11G03450, NO11G03450 (gene) Nannochloropsis oceanica

Overview
NameNO11G03450
Unique NameNO11G03450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3306
Alignment locationchr11:1109361..1112666 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:1109361..1112666 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL111nonsL111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR019ncniR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR011ncniR011Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008529NSK008529Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03450.1NO11G03450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675711gene_12283Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|676087gene_12014Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03450.1NO11G03450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03450 ID=NO11G03450|Name=NO11G03450|organism=Nannochloropsis oceanica|type=gene|length=3306bp
ATGTCCCGCACAAAACTCTCTGGAGCGGCCCGTCGCCGCCGCATGAAGGC
GACTCGTCTTCACCACGAACAAATCATCTACCAGCAGGAAGACCCCGTGG
TAGAGCAGCCGCGCCTCGACCACCTCGTCGTGGCGCAGGCCTCCGGGCCA
ATCCCCACTCCAGTGGAGCTTGTTAATCCCACCGTCTCATCCCCTTTGAT
GGACGACGTGGACGTCGTCGTCATTGCGATTCATCCGGCGCCCGAGCCCC
ACCAGCAGAAGGAACATCAGCAGCCGCAGCAGCAGGAGCAACTGCAGCCC
CGCCCTCACGACGAGCCTCGTGGGCGAGGGAATTGGAAAGGGCCGCAACA
CACCCGCAACTTTTCCATTCAGCACGCAGCTCCCTGCAGCTATCAACACA
ATAACAATCGCCACCTTGAGCGGCGCGTGTCCTATCCGCCCTCCGCGTCT
AACCACCACCACCACCACCACCACCACCACAACCAGCACCACCAGAATTA
CTGCATCCAAGTCGGGGAAACCATCAATCTTCAGGCCTACGATCTGCCAT
TCACGATGCCGCATGATGACTTTGCGTACCATCACGGACAGGCCAGGCAC
GGCAACAGCATGTCTCTTCACCCCTACGAGCCGCAGCACCAGCAGCAGCA
GGTCCAGCTGCAGCAGCAATTTGGGGGATACAGCTCCCCCAACAGCAGCG
ACGAGGGGAGTTTGAAAGGAGACTACAGCTGTCAGGGCGGGGCAGGGGAC
TATATGAGTGTCAGTGGAGAACAGACAAACTACTATTCTGGCTCCTCCTA
CCCCTATCACCACGAGCAACACGAGCAGCCCCCCGACCCGCACTACGATG
GACCTCTCCCTCCCCCTTACTTTGCATTTAGGTACACCACGATGGCGACT
GGCATTTCCTATCATAGATACATGCCCTCCTCCTCCTACGACTCGCAGGC
ATCGTACTCTCCCTTCTATGGGAACCCGCAGCCTCATGGCGGCAATACGG
AGGCGAGCACTTCCCCTCACTATTACCAGCAGCAGCAGTTGCAGGAGGGG
ATGAGAGGAGGAATTGAGGGAGGAATGAACCGCAGCAACTTCAATCCTCC
CCACCCTGACATGATAATGACGGCGGTGATACAGCAAGGCAGCAGTAATA
GCAAGTGTAAATATAGTAATGGCACGGATGAGGACATGAAGGCAATGGAG
CAACACAAGCGAGGAATTGTGGAGCAGACGAGAGAGAGAGGGTCGGAGAA
GGAAACGCGAGAGGAGGTATTGTCTAATGGCGTGAGAAAAATCACACGTG
GTGAATTGACGCACTATATCTATCCCGAGGATATGGCGCGGATGACTCAG
GAGGAGATCATGATGGAGATGTCTGCCTCCAGCCATATCCTCAATGCTAA
CCTGCCCTTAGAGAGGCAGCAGCACCATCCTCAGCAGTTTCCGCAGCATC
ACTACCACCACCACCACCAGCAGCAGCACTATCAATGCTACACCCCACCG
GGCTCGCCCCCGGTACAGCCCTATCAAAACATCTCTCCGCCCTACTCCCC
CGTGACCACCCCACCCGTTATGCAGTATGAGAAGCATTTTTTGGGAAAAA
GATCCCATCCCCAAAGTCCCCAGGACGAGGAGCAGCAAGTACCCACCCAC
TATAACGGGCCTCCTTCCCCGCTTACACCTGCACCTTGCTCTCCCCCTTC
CTATCCGATGGATACCACGCTTTTCAACGATCAAATCCTGCCCCACAGTC
ACCAATCACACCGCCAGCTTCAAAAACAGATTCAGTCGAAGGTACAAGAG
CAGCAGCAGCAGAAGCAGCAGCAGTCGCCCGGAATGTTCAAGACCAAGAG
CCCCCCTCCCATCCTCCCCGCTATTACCGAGGGAAATTCTATGTGTCCCT
CTCTCCCTCCCTGTTGTAACAGTTTAGATAAGAGTGGGGGCAGCAGCAGT
TGTAGTGACAGTGAGAACAGCAAGGGAGGCAAGAAGATCAGGAGCTACCG
CACCAAGAGGAGAGGGCTGCTCCGCACCGCCACCAACAACACCCGCAACA
AGTTTCCCAGCGAAAAACAGCAGCTAAGACAGCAGCACCAGCAGCAGAAC
CAGCCCAAGTGGAACGGTTTCCCCCGCATGCCTCTCTTCTCGACCACAGA
CTACGCGGGGAAGGCCTACACATTCTACCGACCGGATGACTACCAGGACG
TCATTTGCTACCCCACCCGTTTCTTCCACTGCCCCCAGCCTCCCCTTGCC
CTTCCGGCCCGGGAAATGGAGCGCCGCGGCCTGCCGTACGGGCCAACCTA
TGGACCATTGGCGCCATGGCATTTCCCTTATGAGCGACCACAGCCGGTGG
CGGCGGAAGGGAAGTGAGAGAGGGAAAGAGAAGGGATGGTGGTGGATTGC
GTTTATGTCTCAACAGAGATGAACAGGAACGGACTGGGGGGATCTAAGAG
CCTGTGCATAAAAGAGATAGGAAAATATGAATCTGTATACACAAATATGA
GCACCGACAGAGGAAAAGGAAAAATAAATGGATAGAACAAGAGTTTATAA
AATAATCACTCAGACAAGTTGTATTTTAAGGAAAAGATTTGCACTAGGCA
TGAACCGAAGGCAATCAGCAAAAAATGCAGAACCGACCAGACGAAATCAG
CAGAGACAATATAAAGTTTGAGAATTAGGGAGGAATAAAGGACGTAAGGT
AGTTTTTATACTCTAAAATATCGACTTTCGAGAGTGCGGCGACCCAGATA
GGAAATTAAAAAAGAGTAGAGTGAAAAAAGACGAAGGAACAAAGCAGAGA
AGAGGACGTAAAAATTTTATCCATGCATGTAATTGATTGGTACAAATTTG
GACTACTAGCGAGTAAAAATACATTACTGAAAAGCCGGAAATGTGTTGTG
AAAACAAAGCTAAAAATATAACGACAAGCGACTGGCCCGTTCCGACAGAA
AGCAAGCAAGAAGCATCATATTGACAGTGGTAGTGAGAGATATGGAAAGA
AAAGATAAAATTCACGAAGATAACAAGGACTATCAGAGTCTGATTGAAGG
GGCAATTTGTGCAGAATACGAGAAAAAAAGGCAGTCATTTACTCGCCTTA
ATACCCACTCGGGCAATCTCAAAGAGATGGTAGAAAATAGAGGGAAAAGA
GAGCGTCATTCACCAAATGGAGGGCTATAGAAAGTGCAGCCAGCTTGTCG
ATCGAGATAGAGGAAGAGGAAAATATAGAGCGAGAGTAGTAGAGTGAGTA
CGCATCTATCCACACACAAATTTACGCACATATCCATGTTCACTTGTGCA
ATGATC
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protein sequence of NO11G03450.1

>NO11G03450.1-protein ID=NO11G03450.1-protein|Name=NO11G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=789bp
MSRTKLSGAARRRRMKATRLHHEQIIYQQEDPVVEQPRLDHLVVAQASGP
IPTPVELVNPTVSSPLMDDVDVVVIAIHPAPEPHQQKEHQQPQQQEQLQP
RPHDEPRGRGNWKGPQHTRNFSIQHAAPCSYQHNNNRHLERRVSYPPSAS
NHHHHHHHHHNQHHQNYCIQVGETINLQAYDLPFTMPHDDFAYHHGQARH
GNSMSLHPYEPQHQQQQVQLQQQFGGYSSPNSSDEGSLKGDYSCQGGAGD
YMSVSGEQTNYYSGSSYPYHHEQHEQPPDPHYDGPLPPPYFAFRYTTMAT
GISYHRYMPSSSYDSQASYSPFYGNPQPHGGNTEASTSPHYYQQQQLQEG
MRGGIEGGMNRSNFNPPHPDMIMTAVIQQGSSNSKCKYSNGTDEDMKAME
QHKRGIVEQTRERGSEKETREEVLSNGVRKITRGELTHYIYPEDMARMTQ
EEIMMEMSASSHILNANLPLERQQHHPQQFPQHHYHHHHQQQHYQCYTPP
GSPPVQPYQNISPPYSPVTTPPVMQYEKHFLGKRSHPQSPQDEEQQVPTH
YNGPPSPLTPAPCSPPSYPMDTTLFNDQILPHSHQSHRQLQKQIQSKVQE
QQQQKQQQSPGMFKTKSPPPILPAITEGNSMCPSLPPCCNSLDKSGGSSS
CSDSENSKGGKKIRSYRTKRRGLLRTATNNTRNKFPSEKQQLRQQHQQQN
QPKWNGFPRMPLFSTTDYAGKAYTFYRPDDYQDVICYPTRFFHCPQPPLA
LPAREMERRGLPYGPTYGPLAPWHFPYERPQPVAAEGK*
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Synonyms
Publications