NO11G03250, NO11G03250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03250 vs. NCBI_GenBank
Match: XP_005853346.1 (hypothetical protein NGA_0723100 [Nannochloropsis gaditana CCMP526] >EKU23017.1 hypothetical protein NGA_0723100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 283.9 bits (725), Expect = 4.100e-73 Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 0 Query: 54 MDEALATFNRVFPIGTAGADLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPGDDRFIA 210 MDEA TFN+VFP+ TAGADLRPVVLFDGVCMFCNRGIDTLLALD+NRKIRVAPLQSELGR+LMTVCGRDPDDLSSMLVVE+DK L KSDAAIRIAEVAAPHPLLGGALE+AA++LLPQ MRDGAYD VAENRYSI+GKR+ECRLPDPGDDRFIA Sbjct: 1 MDEAQKTFNKVFPVNTAGADLRPVVLFDGVCMFCNRGIDTLLALDVNRKIRVAPLQSELGRALMTVCGRDPDDLSSMLVVEADKSLFSKSDAAIRIAEVAAPHPLLGGALERAARLLLPQEMRDGAYDTVAENRYSILGKREECRLPDPGDDRFIA 156
BLAST of NO11G03250 vs. NCBI_GenBank
Match: EWM24881.1 (Putative thiol-disulfide oxidoreductase DCC [Nannochloropsis gaditana]) HSP 1 Score: 283.5 bits (724), Expect = 5.400e-73 Identity = 154/215 (71.63%), Postives = 171/215 (79.53%), Query Frame = 0 Query: 1 MRAFVYRAGPATWMRRAATTAGKI---TTAQFST---ASTSSTGASVDATAIPPPPRPTMDEALATFNRVFPIGTAGADLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPGDDRFIA 210 MRAFV+R+ +T + T I +TA+FST PRP+MDEA TFN+VFP+ TAGADLRPVVLFDGVCMFCNRGIDTLLALD+NRKIRVAPLQSELG +LMTVCGRDPDDLSSMLVVE+DK L KSDAAIRIAEVAAPHPLLGGALE+AA++LLPQ MRDGAYD VAENRYSI+GKR+ECRLPDPGDDRFIA Sbjct: 23 MRAFVFRSQVSTKLVSRCTRHRWIPQGSTARFSTXXXXXXXXXXXXXXXXXXXXSPRPSMDEAQKTFNKVFPVNTAGADLRPVVLFDGVCMFCNRGIDTLLALDVNRKIRVAPLQSELGCALMTVCGRDPDDLSSMLVVEADKSLFSKSDAAIRIAEVAAPHPLLGGALERAARLLLPQEMRDGAYDTVAENRYSILGKREECRLPDPGDDRFIA 237
BLAST of NO11G03250 vs. NCBI_GenBank
Match: GAX79384.1 (hypothetical protein CEUSTIGMA_g6826.t1 [Chlamydomonas eustigma]) HSP 1 Score: 124.8 bits (312), Expect = 3.200e-25 Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 0 Query: 65 FPIGTAGADLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAE-VAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPG-DDRFIA 210 +P D RPV+L+DGVC CN ++ +L LD + R+A LQS GR L+ CGR PDD+SS++VVE + +KSDA +RIA+ ++ P PL + +P +RD YD VA+NRYSI+GKRD CRL D +RFIA Sbjct: 80 YPADDFANDRRPVILYDGVCNLCNGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFA-----LFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFIA 221
BLAST of NO11G03250 vs. NCBI_GenBank
Match: OLP91065.1 (DCC family protein, chloroplastic [Symbiodinium microadriaticum]) HSP 1 Score: 122.5 bits (306), Expect = 1.600e-24 Identity = 65/138 (47.10%), Postives = 92/138 (66.67%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDIN-RKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPG-DDRFI 209 D RP+VL+DGVC CN +D L D + R++R + LQSE+GR L+ CGR +DLSSMLVV+ D +SDA + + + +L G L KAA+ L+P+ +RDGAY+ VA+NRY ++G+R E RL G +DRF+ Sbjct: 57 DDRPIVLYDGVCNMCNSAVDVALQKDPDGRRLRFSALQSEVGRQLLVFCGRRAEDLSSMLVVKPDGECLSQSDAVVFVGQQLEGSSVLQG-LSKAAQALVPKPLRDGAYNVVAKNRYRVLGRRTELRLKQDGMEDRFV 193
BLAST of NO11G03250 vs. NCBI_GenBank
Match: XP_024399173.1 (DCC family protein At1g52590, chloroplastic-like [Physcomitrella patens] >PNR62289.1 hypothetical protein PHYPA_000713 [Physcomitrella patens]) HSP 1 Score: 119.8 bits (299), Expect = 1.000e-23 Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAK--MLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPG-DDRFI 209 D RP+VLFDGVC FCN G++ +L D ++R+A LQSE GR+L+ GR DDLSS++++E D R +KS+ +R A+ LG L +L P RD YD VA NRYSI+GKRD+CR+ DP +DRF+ Sbjct: 118 DSRPIVLFDGVCNFCNAGVNFVLDNDPEGRVRMAALQSEAGRALLLRAGRLSDDLSSLVLIEKD-RSYIKSEGVLRTAQ------YLGNLLPPVGSLGLLFPLFFRDFVYDNVANNRYSILGKRDQCRVSDPRFNDRFV 249
BLAST of NO11G03250 vs. NCBI_GenBank
Match: GAX15700.1 (hypothetical protein FisN_3Hh174 [Fistulifera solaris]) HSP 1 Score: 117.9 bits (294), Expect = 3.900e-23 Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 52 PTMDEALATFNRVFPIGTAGADLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPGD--DRFIA 210 PTM RVF D RPVVLFDGVC CN ++ L D ++R A LQS +GRSL+ GR DD+SS+++V +D +KSDA ++I E +P L + + L+P +RD YDQVA+NRY +MGKRD CR + DRF++ Sbjct: 48 PTMLPPRVVSRRVFQ-----NDQRPVVLFDGVCNLCNNAVNLALDWDPQGRLRFAALQSAVGRSLLQTHGRQADDISSIVLVNADGAY-IKSDAILKITEALSPPFLPAREVALLGRFLVPAVVRDLIYDQVADNRYQLMGKRDVCRFDADNEFADRFVS 201
BLAST of NO11G03250 vs. NCBI_GenBank
Match: EJK44712.1 (hypothetical protein THAOC_36727, partial [Thalassiosira oceanica]) HSP 1 Score: 117.5 bits (293), Expect = 5.100e-23 Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLG-GALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPG--DDRFI 209 D RPV+LFDGVC CN ++ L D K+R + LQS++GRSL+ GR DD+SS+++V +D + KSDA + I+E P P + L + A L+PQ +RD YD VA+NRYSIMG RDECR G DDRF+ Sbjct: 103 DDRPVILFDGVCNLCNNAVNLALDWDPKGKLRFSALQSDVGRSLLQAHGRAADDISSIVLVRTDGAYT-KSDAILGISEELNPLPFVPMKPLSRLASGLVPQFLRDLIYDGVADNRYSIMGIRDECRFDADGEFDDRFV 240
BLAST of NO11G03250 vs. NCBI_GenBank
Match: XP_002503125.1 (predicted protein, partial [Micromonas commoda] >ACO64383.1 predicted protein, partial [Micromonas commoda]) HSP 1 Score: 115.9 bits (289), Expect = 1.500e-22 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRL 200 D RPV+LFDGVC CN G++ L +D K+R A LQS GR+L+ GRDPDD+SS+++VE D VKSDA +RIA + +PL A ++P +RD YD +A+NRY ++G +DECRL Sbjct: 19 DKRPVILFDGVCNLCNGGVNFALDMDPPGKLRFAALQSTAGRALLRRAGRDPDDISSIVLVEEDAAF-VKSDAVLRIATYFSANPLFPFA--GTLGPVVPTFIRDAFYDAIADNRYDLLGMKDECRL 142
BLAST of NO11G03250 vs. NCBI_GenBank
Match: CBJ26278.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 4.300e-22 Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGG--ALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPG-DDRFI 209 D RPV+L+DGVC CN ++ L +D + K R + LQS+ GR+L+ + GR PDD+SS+++VE ++SDA +R+ LLGG L +L+P+ +R+ YD VA+NRYS+MGKRD CR D DRFI Sbjct: 61 DARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGR------LLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193
BLAST of NO11G03250 vs. NCBI_GenBank
Match: GAX15736.1 (hypothetical protein FisN_3Lh174 [Fistulifera solaris]) HSP 1 Score: 113.2 bits (282), Expect = 9.600e-22 Identity = 60/138 (43.48%), Postives = 85/138 (61.59%), Query Frame = 0 Query: 73 DLRPVVLFDGVCMFCNRGIDTLLALDINRKIRVAPLQSELGRSLMTVCGRDPDDLSSMLVVESDKRLSVKSDAAIRIAEVAAPHPLLGGALEKAAKMLLPQTMRDGAYDQVAENRYSIMGKRDECRLPDPGD--DRFI 209 D RPV+LFDGVC CN ++ L D + ++R A LQS +GRSL+ GR DD+SS+++V +D +KSDA ++I E +P L + + +P +RD YDQVA+NRY +MGKRD CR + DRF+ Sbjct: 23 DQRPVILFDGVCNLCNNAVNLALDWDPHGRLRFAALQSAVGRSLLQTHGRRADDISSIVLVNNDGAY-IKSDAILKITEALSPPFLPTREVAMLGRFFVPAILRDLIYDQVADNRYQLMGKRDVCRFDADNEFADRFV 159 The following BLAST results are available for this feature:
BLAST of NO11G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03250 ID=NO11G03250|Name=NO11G03250|organism=Nannochloropsis oceanica|type=gene|length=630bpback to top protein sequence of NO11G03250.1 >NO11G03250.1-protein ID=NO11G03250.1-protein|Name=NO11G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top Synonyms
Publications
|