NO11G03170, NO11G03170 (gene) Nannochloropsis oceanica

Overview
NameNO11G03170
Unique NameNO11G03170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4606
Alignment locationchr11:993583..998188 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:993583..998188 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
Homology
The following BLAST results are available for this feature:
BLAST of NO11G03170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03170.1NO11G03170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO11G03170.2NO11G03170.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591808gene_5231Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03170.1NO11G03170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO11G03170.2NO11G03170.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03170 ID=NO11G03170|Name=NO11G03170|organism=Nannochloropsis oceanica|type=gene|length=4606bp
TCCATGACTCCTTATATGTTGTTTTTCATTCGTTCATGGATATCAATAAT
ATCACGGCAGTCTCTCAACTTATATGTGGCCTTGCTTTGCTGTGGCAAGC
CCTTAGACTCGTCTCTTTTTCATTCTCTTTCATACAAAATATGCAAAATA
TTCATTCACAGAGCAGCTCCCTGTATGCTTATAAATATATAGTACCAAAT
TCATGTGAATCTGTATTCTATCTGCCCCCCCCCCTCCGATGGGGCCATTT
CGGGCTTGCTTGGACTCAAGCCTGACTGTCTCTGTCAGCCCTCCTGACTA
ATAAGACCGAAGGCACATGCGCCCCGAACCTGAAGCAGTTAGTTTTTTGA
CACACACACCTGTATAGCAACTCTCTCTCTTACCCCGTTGAGCGCCGGCG
TACAGCATCCCTGTCACAAACAGGCACAGCCTTCTCCGACCCTTCCCTCT
CCTACCTCCTCTCTCGCGTCACGGCTTGTGTCCCGGTGCACACCCTCTCC
TATATTCAAAAAACCTTATCAATCTACGACCATATGATATACACATAGGT
ATGTAAGTGCTTTCTTAGAAAAAATAGTGGTCCAGAAGGGGCGCAACGCC
CACGACAAGCAACACGAGCAACACCAGCTCCCTCACGGCCTCCATCGCCG
CTTCGCCACCCTTCGCCACAAAGCCATTCCATCCATTCACCAGCGCATAA
ACGGCAAATACCAAAAGCAAAGCCTTAGTGCTGGTAGTACTGTGGAAAAG
AGTCTCTCCGTCGTCCTCGGCGATCACGTGGGAGGTCCCGGGACCGAGGC
GGAGAGGGTGGCTGTTCCTCCTTTTTAACTCAGCCCGTAGAGGCATGGGC
GTGGCCGTCAGCGTGATGACAGGCGCTTTAGTGGTGGCAGAGGATGAGGA
TGAGATGGAGGAAAAACAAGTAGCGGCTATGCTTGTCGGAATGTGGGTCG
AAACAAACCCGCCGAGGCCGTGCGAAGCAGTGGTGGTGGTGGTTGTGGTG
GTGGTAGTGGTCATGTTTGAAGCCGTGGTTGCCCTGCGGTGCTGGTAGAC
CGGGATAGAGGGATGGATACCTGCCGGCCTATGTATTTGTGTACATTTAT
AAAAGCATGTGAGTGTCAGTTCAAGAAATGGGCATAAGTAGGGGAGAAAG
CCTGCGGCAGAGCTGTCGTAGCAAGTCGTAATGAGGCACGAGGGAAGGAA
GGGTGAGATGGAGGAGGAGAGAGGCAGACGCCAAGGGGTATGATTTGAGT
CAGTTGTAATGACAGCTCAATTGGGACGAATGAAGTTCAGCTATACAAAT
ACGAGAGGAAGGCATTTGTATGATAAAGAACAAGGCGATGACAGGCAAGG
ATAAGGCCGCTGGCACAGCCGAACATCAATCATTGAACTTCGATAAAAAA
AGCTTCAAGAGTCAAGTGTACACCAACCCCTTCTTTGCTTTGTTTGCACT
AAAGATGTCGATTATTTGAAATTCATTAAACGTTCTTCATGAAAACCATT
TCAGACGCGGCTATCGATGCGCCTGTGAAATGTCCCACCCTTTGTTTTGG
TTCTTTGTGGTGGTGGAAAGGCATTTGGAAAGAACAGAAGAAAAGTGGGG
CGGGTGGAAGAGACCCCAGAACCGTTGGCAAAGCGAAGCATTGTAATCAT
TTGTTCCTGATAAGACAAAGACACACTGGAGGACTCATTTTTTTTTCAAA
CTTCTTTGCTTCCTCTATGGAGGCATGTCCGTCTCCATTTTGGTCTCACG
GAATATGTCGCTTTACCCTTCCCGCTCCCATTCCCTGCCTCTATCTTTCC
AAAAAAAGTCGCATTCATTCTTACATTCTTACGCCATTACATCCAAACCA
TCACACAAGCAAACCCATGAGCAGCAGCGGCGGTGGCTTCACGGAGGATG
ATCAAGCGCGGCTCTACAACCAGACGGTATCTCATGCTGTGGCGAAGGGT
AGCAAACGCGGCTTGGGATTCTGTTCCGGTCCAACCTCGCCTCCCCTACC
CCCAACGCGACTATCATCACCAAGACGCAAGGAGGCCAAGGTGAACGCCC
GAACCGACGACGATGACGATAGCGACAAAAGAAAGCAGGAGATAGAAAGG
AAGGAAAAAAATAAGGGAAAGGATAGGCGGGAGAAGATGGCCAGCGGCGG
CAGCAGCAGTAGCAACGGCTCTCTCCGTCGACGCTCCCGTTCGCGCTCCC
CACATCTCCACCACCGCGAGCGCGACCACAGCCACCGCAAGCGCCACGAA
AGAAGACGTGAAGAAAGGCATCATAATCAACACGAGGAGGAATTTCGGAG
CCACAGTAGCGAGCGTGAGACGAATGAGAAAATGCATCAGTTCCGAGGAC
GAGAAGAGAAGCGCAGTCGCAGCAGGGGGAGGACGAGGGATGGAGGCAGG
GAGCGACTCAGGGACGACAGGAAAAAGAGAGAAAGGAGTAACAGTAAAGA
GGAGGAGGTAGAGATAGATGAATTTGGGAGAGAAATTCAGAAGGCTAGGA
CACATGAGAGCAAGAACAATGGAGAAAATAGCAGAAACAAACGAAAAAGT
AGGAGCAGGAGCAGGAGCAGGAGCAGGAGTAGGAGTAGGAAAGGAAACTG
CTCCAGCCGTCGAGACAATCAGAGCCGTGACAAGTACAGAGAAAAAATAA
TGGATAGGTCGAGGGATATGAAGGATGGAAAGATCTCAACCGAGTCCACC
ATCCTCTCCATCAGCGACCGGATCAAGAGGAAGGTCGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTACACCTGCCTCTTCCATCTCCACCA
TAACTACCGACCCTACCTCAGCCTCCCTCTCAATCATCCAACGGAAGCTC
CGGGAGACGGCCCGACAAACCCTGGAGAGGACGAGTCGAATGGACACGGA
ATTAAAGGTCGCTAATCAGAAGGGCCATGGATGGGAAGGGCAGGATATGC
ACGCGACTGCCGAGTTCCTTCAGGAAGAGGAAGCGCTTGCTACGGGTGCG
GAGGGAGTGCTCGAAAGGCAGGAGGCGAGAAGAAAGATGATCGCGGCGAT
TGAGGATGAGGGCATTGAGAGTTTGAGTCAGCATACAAAGgtagcgaggg
gacgagggagaaagggaggggaggagcaggagtgtgtaatgatagctcag
atccacatggattacccctcgattttcccacatttcttttctcgatctcc
cccccctcttcccttcagGTCGGTCAGGAATGGAAAGCCAAGGAGGCTCT
CGCCCGAGGCCGGGCTGCCAAAAAAGCACGCAACGCTGCCCGTCGTGCCC
GTCGCTCCCAACGGGAAGAAAATGCCCTCCTCCCCCTGTATAAGAGCCTG
AAGAAAGGGGATAAAGTGGAGGCGAAATGGGGCAAGGACAACCTGTGGTA
CCCGGGCCTGATCAAGgtgggatcttattacatcgaggtttatcttcctt
ggttctcttgtcctctttcagatttatgcggtgtgtctgatcctttccct
ccctccctctctcccttcctccctctttccctagGCCTGCATGCATTCTG
GCTATCCCATCATGAAAGCCGAGGTGGTATTTGACGGGTGGGGAAACATA
GACGAAGTGTCTTGGCAAGACATAAGGCTCCTTCAAGCGGGGTCGGAGGA
TGAGGACAGCGAGGAGGAGAGCGAGAGTGAGGGAGAGACAGAGGGCGGGC
AGGAGGGAGGAGAGGAGGAGCAGAGGCCGGTTGTGGGAAGGCCGCGGGCG
GTGTGGGAGACGTCTTCGGAGAAGGAGGATGGCAAGGGTATGATGCTGAT
GGACCGAGAAAAAAAGTGGGCGAGAAAGGAGGAGGAAGAGAAGGAGAGAT
TAGCAAAGCTTTGTAAAGAAAAAGAAGAGGAGGAGGACGACGAGGAGCAG
GGCTTGCTTAGTCCTGTCCTCCTTCAGGCCAAGGCCCCTTGTGCTTCGGT
GGTGGCTGCGGCGAGTGGGATGGGAGGAGGAGGAGGAGCAGGAGGCGCAG
CAGCAGCAGCAGGAGGTGGCTGGAAGGCCCGTGCCGCAGCGGCGAGAGAT
GCGGTCAAACGAAAACAGCAAGCGGCGGCAGCGGCTGCAACTGCCGCTAC
TCCTGCCGCTGCTGCTATCACTGTTACTCCTACTCCTCCTGCTAGTGCTC
CTGTTGCTGCTACTGCTGCTGCATCGGGAATGTCGGTTGCGGCGTTTGCT
TCTAAGCTGGCGCTGAAAGTAGAGGAGGAAAAGGTATCGATGTTTTTACA
GGATCAGGAGAGACCCAGATTGTGCATGTCGTGGGGTGGAGGGGAGGGGA
AAGGGAAGAAGAAATAGGGAAAGGAAAGGGAGGAGGAGGAGGAGGAGAGT
GAATAATGGAGTAGGGGTGTACATAGATTCCCGCGGGGCTTGTTGTGCTT
GTAAAGGAGACATTGAAATGTAAATAATTGAGCCAGGGCCTTGAAGGTGT
AGGCGGATAGATGCCATGAGGAAGTAGGTACCCACCCGATTAAGGCTAGG
AACCAACCAAGAGCATTCTGCACTGATCTAATCCAGGTAGGACACATCCT
CAACCTGCCCAAGCTGCGGGAGCCACCTGTAGTAGTAGAGAAATAGGGGG
GGGGGG
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protein sequence of NO11G03170.1

>NO11G03170.1-protein ID=NO11G03170.1-protein|Name=NO11G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=861bp
MKTISDAAIDAPVKCPTLCFGSLWWWKGIWKEQKKSGAGGRDPRTVGKAK
HCNHLFLIRQRHTGGLIFFSNFFASSMEACPSPFWSHGICRFTLPAPIPC
LYLSKKSRIHSYILTPLHPNHHTSKPMSSSGGGFTEDDQARLYNQTVSHA
VAKGSKRGLGFCSGPTSPPLPPTRLSSPRRKEAKVNARTDDDDDSDKRKQ
EIERKEKNKGKDRREKMASGGSSSSNGSLRRRSRSRSPHLHHRERDHSHR
KRHERRREERHHNQHEEEFRSHSSERETNEKMHQFRGREEKRSRSRGRTR
DGGRERLRDDRKKRERSNSKEEEVEIDEFGREIQKARTHESKNNGENSRN
KRKSRSRSRSRSRSRSRKGNCSSRRDNQSRDKYREKIMDRSRDMKDGKIS
TESTILSISDRIKRKVAAAAAAAAAAAAATPASSISTITTDPTSASLSII
QRKLRETARQTLERTSRMDTELKVANQKGHGWEGQDMHATAEFLQEEEAL
ATGAEGVLERQEARRKMIAAIEDEGIESLSQHTKVGQEWKAKEALARGRA
AKKARNAARRARRSQREENALLPLYKSLKKGDKVEAKWGKDNLWYPGLIK
ACMHSGYPIMKAEVVFDGWGNIDEVSWQDIRLLQAGSEDEDSEEESESEG
ETEGGQEGGEEEQRPVVGRPRAVWETSSEKEDGKGMMLMDREKKWARKEE
EEKERLAKLCKEKEEEEDDEEQGLLSPVLLQAKAPCASVVAAASGMGGGG
GAGGAAAAAGGGWKARAAAARDAVKRKQQAAAAAATAATPAAAAITVTPT
PPASAPVAATAAASGMSVAAFASKLALKVEEEKVSMFLQDQERPRLCMSW
GGGEGKGKKK*
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protein sequence of NO11G03170.2

>NO11G03170.2-protein ID=NO11G03170.2-protein|Name=NO11G03170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=656bp
MKTISDAAIDAPVKCPTLCFGSLWWWKGIWKEQKKSGAGGRDPRTVGKAK
HCNHLFLIRQRHTGGLIFFSNFFASSMEACPSPFWSHGICRFTLPAPIPC
LYLSKKSRIHSYILTPLHPNHHTSKPMSSSGGGFTEDDQARLYNQTVSHA
VAKGSKRGLGFCSGPTSPPLPPTRLSSPRRKEAKVNARTDDDDDSDKRKQ
EIERKEKNKGKDRREKMASGGSSSSNGSLRRRSRSRSPHLHHRERDHSHR
KRHERRREERHHNQHEEEFRSHSSERETNEKMHQFRGREEKRSRSRGRTR
DGGRERLRDDRKKRERSNSKEEEVEIDEFGREIQKARTHESKNNGENSRN
KRKSRSRSRSRSRSRSRKGNCSSRRDNQSRDKYREKIMDRSRDMKDGKIS
TESTILSISDRIKRKVAAAAAAAAAAAAATPASSISTITTDPTSASLSII
QRKLRETARQTLERTSRMDTELKVANQKGHGWEGQDMHATAEFLQEEEAL
ATGAEGVLERQEARRKMIAAIEDEGIESLSQHTKVGQEWKAKEALARGRA
AKKARNAARRARRSQREENALLPLYKSLKKGDKVEAKWGKDNLWYPGLIK
VGSYYIEVYLPWFSCPLSDLCGVSDPFPPSLSPFLPLSLGLHAFWLSHHE
SRGGI*
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Synonyms
Publications