NO11G03120, NO11G03120 (gene) Nannochloropsis oceanica

Overview
NameNO11G03120
Unique NameNO11G03120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3431
Alignment locationchr11:976754..980184 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:976754..980184 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001936NSK001936Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03120.1NO11G03120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591773gene_5222Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03120.1NO11G03120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03120 ID=NO11G03120|Name=NO11G03120|organism=Nannochloropsis oceanica|type=gene|length=3431bp
CCGCGTTGTAACATACGTCCCTTCTATCTCTGGCACTCTCAAGTACACTG
CACAGTCGAACCACCACCACCACCATCCAAGTGTCGTCCGCTTCCGGTTT
TCGCAGCACCAGCACAAACACTCGCACCAGCACCACCACCAACACCAGCA
CCAGCACCAGCACCAGCACCAGCACCAACACCAACCGGAGTGGTGACTTG
TCGCACGGCAACCAGACAATGCCCGCCATGTCCAAGATAAAAGACCgtaa
gaagaagaagaagaggaagaagaaaaaagcttgctgcgtccgctcaaaaa
gcttccactcccttgcccccgagtagcaccaccacgacacctatccccat
gtcagccgttgctaattgctccctctccaccctcctccttctccctaccc
agGGACCAGTCCTCGCCCCAGGAAGTCCAAGAAAAAGCGCACTTCCAAGG
TGTACATCCCTCCCTTCCTCGACCGCTTCCCCCTCAATCCGATCACCACT
GCCGACGCCGATCCTCATCGGGACGCCTTCCCAGTGGCCCATTCCCCCAT
TTTCCCGAATGCCACACTTCTGAATTTAGTCTGGCTTGAGGCCCAAGgta
cgatggagggagaggaggacgaggacgaggaaggggatgaacgctgtttt
cttgaaagcgccaagcggagatagagaggggacggcgcttcgcctactat
tacggatacttttctcatttcctccctccttcgctcattccttcctcggt
ggcgacacgaacgagggtggtgctactggttcacattgtttatcgcgcat
tcacgctccctccctcactccctccctccctacctccctccctccctccc
ttcccaggtgatgacacacatcattttgactgctgtcgatttaatgttgt
cgaatgacttcctccctcacacaactctccctctctccctcccttccccc
ttcgcccagGCTACCCGCGACACAGCGGCATCGTGCGAGACGATCAAATT
TTTACGGCCGAGGATCACCACAGGGTGACATTGGCTGCGAACAAATACGG
AGCAGATTTTGAAGCTGTCGCCCGGGAGGTTGGACGGCCCCAGTGGGCCA
TCGCCTCTTTCCACGAATGGCAAAACTACATCGTTGGGGTGTGGTTCGTC
TATCAGGTGGTGGAACGGGGGCGGAAACGCCGCTGGAGCGAGGCGGAGAT
CACGCGGGCGATAGGGACTACCGTGCAGATGCTCTCTAATGGAACGTGgt
gagtgctagtggattttctttcttttaccttgcgtgttcaggcccttccc
tcccgtcctccttccctccctccctcccgtatctcctgtgctttggaacc
tgatcgtcccccttctgcgtgagaatgctgcggatgtaatgcggaaggat
cgataacgctgcaattgaggacgtgaaagtgcataatgaagggtgactcc
acacgtgagcatcctccctccctccctccctcccctctcaccctccctcc
ctccctccctccctccctctcaccctcctcccctccctcccttccttcct
ctcacccttgtgtagtctgcctgctttactcaagcattccctgtgcaccc
tttccgtccctctctgcatgtttcctgcatcttccggtcgttccttccac
aggtctcagtctttcgtcttggaccttcaagcatcgtcctctccacgatg
atggagcatccgcccttttgattgtagtgacattcaccctcccctccttt
cctccctccatccttccgtcctacagccgaattccctcccttcaggcgct
cttccctcctcgaatgaattgaaaatgcgactttatcccatactcttact
gtccctcgcttcatctctcacccctcctcctgtttctccttccctcgcta
acaccctcattccttccctccctccctcatccttccctagGGAGGAGGAC
TTTGCTGCTCCGTGGACCATGGCACAGATCATGGAGGAGAACGAGGGAAG
GATCCCTGACCATCTCGCGCAATTGTTTTCGGGCGAAGCCCTTGAGACGG
AGCGCgtgaaaaacccggcggccatggaacagagaaggatggcacaggct
gcgagagggggggaggggaggaggaggagtggagtgagagtgagagtgag
agtgagagtgagagtgattcaagtgagagtgagGCGGAGGAGGACGAAGA
GGAGGAGGAGAAGGTGGTCGTACTGGGGGGCGGCAGTGGTGGAGAGAAGA
AGGGATCGAATGGGATGGAACAACAGCGACGACGTCAACAACGAGCGGTT
GCACCCTCCTCCTCCTCGCTCTTACCTTCCTCCTTATCGGTCTCCTCTTC
ATCCCACGCATCGGCAGCGACTGAAATGATGGCGGGGGCAGCGGCAGACG
GCGGAGAAGGAAGGGGGGAGGGGGAGGGAGGACTTTCCCGTGCGGTGGGC
AGCTTGGTCGGGGAGGGCGTAAGGCAGGAGGTGGTAGTGCATCAGTATGA
GGGAGAGAAATGTTTAGTGGGGATGAAGGGAATGGTGGGTGTCAATTATG
ATGTGCGCAATTCGAAGTGGCGGGCACAAGCTGGCTGGTATAAGGACAGG
TTTCTGGCAGCATTGTATGTGGGGAGTATCAGGGAAGCATCTATCTTACA
AGACGGTGTGGTGCGTCTACTGTACGGAATAACAGCCACCTGTAACTTTT
CCATCGATACCAAGATCTACCTTGCCCCGTTTAGCGGTGCATATCGACAT
AGAAAACAAATGAGACAGGGCAGGGCCAGCTCCAACCATAATCTTACCCC
TTGTGACCAGGAATACGTCAAAAGAGGCATTTTTAACCTCGAACAGTTGG
AGCATTATCAGCGCACTGGTGAGGTGAGGCGCTGGTGTGACTCAGCGGAG
GGGAAACGTGTCCTGTATAGCAAGGAGCGACAAAGGCTGATGGAGACGAT
ATTGCAGGCAAATGGTCGGGAGGGGGCAGCGTACGGCGACATGCGCATAA
CGGCAGCGTCATCGGAGGAGGAGAAGGAGGAGGAGGATAAAGAGGACGAG
GACAATGAAGAGCAGGAGGAGGGACGGATGGTGGCACCAACGGCGGAAAG
GGAGGGTGAAGAGGAGGACGACGACGAGTGGGATGACGAAGGAGGGGAGG
GGAGCAGCGACAGCGACAGCAGCGGGGGGTGGGAGACCTTCACCGTCCCC
AAGGTTGCGGTTCCTCCCACCGCTGCAAGCCTCTTTCTTACTGCTATGGA
TAGGGAGGCTGCTTTCTCCTCCTCTGCTTCGCTGCACTATCGCCGCCACC
ACCATCAAGAGGACAACGACGATGCCGGGAGCGAGAGTAGCTGGGAGTTA
TTGCAGCGTGAAGAGGGGGGAGTGGGAGTAAAGGAGGGAGAGTTGGAGGG
AGAAAGGGAGATAGAGAGACAGGTAGATTGA
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protein sequence of NO11G03120.1

>NO11G03120.1-protein ID=NO11G03120.1-protein|Name=NO11G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MPAMSKIKDRTSPRPRKSKKKRTSKVYIPPFLDRFPLNPITTADADPHRD
AFPVAHSPIFPNATLLNLVWLEAQGYPRHSGIVRDDQIFTAEDHHRVTLA
ANKYGADFEAVAREVGRPQWAIASFHEWQNYIVGVWFVYQVVERGRKRRW
SEAEITRAIGTTVQMLSNGTWEEDFAAPWTMAQIMEENEGRIPDHLAQLF
SGEALETERAEEDEEEEEKVVVLGGGSGGEKKGSNGMEQQRRRQQRAVAP
SSSSLLPSSLSVSSSSHASAATEMMAGAAADGGEGRGEGEGGLSRAVGSL
VGEGVRQEVVVHQYEGEKCLVGMKGMVGVNYDVRNSKWRAQAGWYKDRFL
AALYVGSIREASILQDGVVRLLYGITATCNFSIDTKIYLAPFSGAYRHRK
QMRQGRASSNHNLTPCDQEYVKRGIFNLEQLEHYQRTGEVRRWCDSAEGK
RVLYSKERQRLMETILQANGREGAAYGDMRITAASSEEEKEEEDKEDEDN
EEQEEGRMVAPTAEREGEEEDDDEWDDEGGEGSSDSDSSGGWETFTVPKV
AVPPTAASLFLTAMDREAAFSSSASLHYRRHHHQEDNDDAGSESSWELLQ
REEGGVGVKEGELEGEREIERQVD*
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Synonyms
Publications