NO11G03110, NO11G03110 (gene) Nannochloropsis oceanica

Overview
NameNO11G03110
Unique NameNO11G03110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5603
Alignment locationchr11:970313..975915 -

Link to JBrowse

Properties
Property NameValue
Description3'-5' exonuclease domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:970313..975915 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0002161aminoacyl-tRNA editing activity
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
GO:0002161aminoacyl-tRNA editing activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0106074aminoacyl-tRNA metabolism involved in translational fidelity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf
IPR007214YbaK/aa-tRNA-synth-assoc-dom
IPR002782Mut7-C_RNAse_dom
IPR0025623'-5'_exonuclease_dom
Homology
BLAST of NO11G03110 vs. NCBI_GenBank
Match: EWM24907.1 (Protein of unknown function DUF82 [Nannochloropsis gaditana])

HSP 1 Score: 423.7 bits (1088), Expect = 2.800e-114
Identity = 297/647 (45.90%), Postives = 355/647 (54.87%), Query Frame = 0
Query: 1089 MDAWVLTAIFDEACRRDANRARWVWKERRRLI-GQKQQNVDTEYPPCWERGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVVEAFVLQAYSAGLLP-VPSSPAXXXXXXXXXXXXXXXXXSIVFFNEGEEDTSLLPPDLSRALQTKSVALVISSSRS-------------NSGTXXXXXXCGSSGDGSDYVSSTPPAVTLTPLLVVSPAAAKVQFSRLASCLNIRRSSIRLATPEECISFFGFPPGAIPPVCHCTRTRLIIDQSLCMDVPPPRLATAXXXXXXXXXXXXXXXXXXXXXXXXXQRLLCGAGAKRRVFICQAAELLALGGSTSLVAPVCSVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEILFLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIEEMKRRDWEIG 1721
            MDAWVLTAIFDE CRR + +AR  W  RRR   G+K++ +  E     ER S+                                            S  +E +VL+AYS+G +P + S+P                   I FF+E   D  +LP D  +AL+TKSVAL+++ + S              +         G             P VT TPLLVV+PA AKV FSRLA+ L + R+++RLAT +EC+S   FPPG+IPPV H T  R+++DQSLC   PPP                               RLLCGAGA  +VFIC+  ELL LGG+ ++VAP                                           XXXXXXXXXXXXXXXXXXXXXXXX                            +E+ FLVDSMLGRLS+WLRVLGVDVE HDF L SILSHK ASSLT+T  +I PA  GTPPPIL +AHR+ RVVLTRD+RL ESRHN LLGV T+L++GNDTRQQLEQVV  F I+LD +ELMSRCSGCNAKGYVAL+ EEI AR+DIPERVK NV+TFWTCVNE C+KLYWKGEMWNKASSKF  MI EM  R   +G
Sbjct:    1 MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKD--GERESK-GEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPT---------------FPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEXXXXXXXXXXXPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPH-PPPSFTLV------------PVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAP-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLG 573          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: EWM24890.1 (hypothetical protein Naga_100116g7 [Nannochloropsis gaditana])

HSP 1 Score: 343.6 bits (880), Expect = 3.600e-90
Identity = 237/463 (51.19%), Postives = 300/463 (64.79%), Query Frame = 0
Query:  116 DNQAFIPH---SLDEDYAAPKTEGEEGN--DDEILPAIHPVADDNNAAHMQAQTHQLYSSVQPSLNPDSQLELCKAKILDTLLPKARLLDPLGGGVTHGEKWELASKIEHWLGCGFKASRSKNSTSSSGTLSRSVVDSSVTRSSDICSCNASGDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGHVAVLTDAVTSLLGADLDASTGSRVGVLGLVCLLEKGVSPLCLSTWLQALRASCCLNVLFPSSPSFPSSSLEY----AHEDRQVITALLDRCLSGIFHGQTREIRAKAIVSVLEATSPTIPYLRALSDPAGPPFVQRLLNGNAGTAEVRAGGALGAYLRGPLSLHNHFFRLVLLSTPPEIALDILRRYQAQQGPAVLKPLGMAEGLLQLLMARGLYRSAYLTALEMKLLETYPVVERVFREDKIKKLVARGKWQFAVIMLEE 570
            DNQ  + H     D      + +  EGN  +D+ LPAIHP      A+   ++   L SS   +  P+ QLE CK+ IL+ L+PKAR+L      VT GEKW+L  ++E     G KAS+ + + S     +  ++  SV R+        + D+          XXXXXXXXXXXXXXXXXXXXXXXXXXX       T  V+ LT  +   L  DLDA+  SRV VLGL+CL+E+G++P+ LS WL A+RAS CLN LF +S    S+  E      HED QVI A L+R LS IF G TR ++ K IV+ L+ TSP +P+L  L DP    +VQRLLNG  G AE +AGGALGAYLRGP SLH HFFRLVLLSTPP++ALDIL+RYQAQ G   L+PLGM E LLQ++MARGLYR AYL AL+M +L+TYPV+ERV+RE+KIK+LV RGKWQFAV+ML++
Sbjct:   45 DNQVHVTHPWIPRDNTVEVLRDDSGEGNCINDDQLPAIHPSTQITGASE-PSEARILQSSAFLASTPELQLEKCKSLILNALVPKARVLG--SQSVTQGEKWDLTFRLERLFTYGVKASQCRRARSHRNKEAGWLLKESVDRAIWDALGTIATDK----------XXXXXXXXXXXXXXXXXXXXXXXXXXXSRHSGSDTTVVSALTHVLAHTLAQDLDAALASRVSVLGLICLVERGLTPMFLSLWLNAVRASGCLNALFAASEMPDSTHQEITPLPVHEDCQVIAACLNRSLSDIFRGHTRAVKPKCIVTFLDVTSPALPFLPILRDPVSQLYVQRLLNGLGGVAEAKAGGALGAYLRGPPSLHAHFFRLVLLSTPPDVALDILKRYQAQHGAVALQPLGMTEALLQVVMARGLYRFAYLAALDMNVLDTYPVIERVYREEKIKQLVTRGKWQFAVLMLDQ 494          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: XP_008606812.1 (hypothetical protein SDRG_02977 [Saprolegnia diclina VS20] >EQC39540.1 hypothetical protein SDRG_02977 [Saprolegnia diclina VS20])

HSP 1 Score: 110.2 bits (274), Expect = 6.800e-20
Identity = 149/752 (19.81%), Postives = 233/752 (30.98%), Query Frame = 0
Query:  964 SLFEHPRLLKLGFGLSGDMQVLRSSWPGMVAFCSLRGAVELGDLGVPGRGAFQCRG---GAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSKEWLGKELDKGEQVSDWDARPLSVAQMTYAAMDAWVLTAIFDEACRRDANRARWVWKERRRLIGQKQQNVDTEYPPCWERGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVVEAFVLQAYSAGLLPVPSSPAXXXXXXXXXXXXXXXXXSIVFFNEGEEDTSLLPPDLSRALQTKSVALVISSSRSNSGTXXXXXXCGSSGDGSDYVSSTPPAVTLTPLLVVSPAAAKVQFSRLASCLNIRRSSIRLATPEECISFFGFPPGAIPPVCHCTRTRLIIDQSLCMDVPPPRLATAXXXXXXXXXXXXXXXXXXXXXXXXXQRLLCGAGAKRRVFICQAAELLALGGSTSLVAPVCSVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEILFLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIEEM 1713
            ++  HP +L +GFG   D++VL+ ++P    F  + G V++G L    + ++  R    GAA                                      LG+ L+K +Q+SDW+ RPL+  Q  YAA+DAWVL A+    C                      ++ D  Y  C                                                     +E+ +          VP S                   S++        T     D  +  + K + L   S    +G           G      +S        P +VV P  AKV  S L+  L + R  +R A P EC S FG+ PG +PP  H     +++D +L                                                       AE + LGG TS V    S                                                                                             E+ FL D+MLGR+++WLR+ GVDV   D               +N               +L +A    R+VLTRD++LA+ R      +  +++  ++   Q +++ + F I  + +  MSRC+ CN KG+  +  EE+    D+P RV E V  FW C+   C +LYW G  ++ A +K   +  ++
Sbjct:  349 AILRHPSVLNIGFGFKHDLRVLKHTFPDKTTFDVVHGLVDMGALLRSWQPSYTGRSLSDGAALV------------------------------------LGRPLNKKQQLSDWEKRPLTPKQAEYAALDAWVLVAMAQRMC----------------------ESSDELYAGC-----------------------------------------------------IESIICD--------VPPSRPVTDIVRLRHARQHAKSASVM--------TQPRIADFVKLHEGKRIRLFPRSDLDANG----------EGASVRLANSLCILANGVPCVVVLPQDAKVDLSLLSMVLGVARKKVRFARPTECTSIFGYAPGTVPPFAHNVAAPVLLDTAL-----------------------------------------------------DGAERIVLGGGTSDVLLEAS---------------------------------------------------------------FEALLELCHAPRVLPLAVQNDITSLQAAPQELKFLADTMLGRVAKWLRMTGVDVVHWD----------KCDEKSN---------------MLIQATVEHRIVLTRDRKLAKQRQ----ALACYVVLSDNIEAQFQEIKKHFSIEFNEETFMSRCAKCNGKGFRIVPLEEVRVGDDVPARVLETVTDFWACLL--CAQLYWVGPKYSTAHAKMQEIFGDI 816          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: OQR92018.1 (hypothetical protein ACHHYP_04128 [Achlya hypogyna])

HSP 1 Score: 109.4 bits (272), Expect = 1.200e-19
Identity = 169/818 (20.66%), Postives = 259/818 (31.66%), Query Frame = 0
Query:  900 ASILQLATRNQAFIFDLWALCGGANTNSNXXXXXXXXXXXXXXXGSSPTTPCLTLLQELDACLISLFEHPRLLKLGFGLSGDMQVLRSSWPGMVAFCSLRGAVELGDLGVPGRGAFQCRGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSKEWLGKELDKGEQVSDWDARPLSVAQMTYAAMDAWVLTAIFDEACRRDANRARWVWKERRRLIGQKQQNVDTEYPPCWERGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVVEAFVLQAYSA------GLLPVPSSPAXXXXXXXXXXXXXXXXXSIVFFNEGEEDTSLLPPDLSRALQTKSVALVISSSRSNSGTXXXXXXCGSSGDGSDYVSSTPPAVTLTPLLVVSPAAAKVQFSRLASCLNIRRSSIRLATPEECISFFGFPPGAIPPVCHCTRTRLIIDQSLCMDVPPPRLATAXXXXXXXXXXXXXXXXXXXXXXXXXQRLLCGAGAKRRVFICQAAELLALGGSTSLVAPVCSVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEILFLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIEE 1712
            AS+LQLA  ++ F+ DL AL G                                      A + +L   P +LK+GFG   D+ VL+ ++P M  F  +   +E+  L    R +     G +                                      LGK LDK +Q+S+W+ RPL+  Q+ YAA+DAWVL AI +                          N + +Y                                                     SA   A +++   A      G + +PS                     I +     E   L+P   SR          +S   S++ T      C    DG+ YV+             V P   K+    L+  L   R  +RLA P ECIS FG+ PG +PPV H     +++D SL                                      R++ G G    +       L+ L G TS V P+ +                                                                                             E+ F+ D+MLGR+++WLR+ GVD+   D       S + +  L                 +LA      R+VLTRD++LA  R      +  +++  ++  +Q +++ + F I    +  MSRC+ CN KG+  ++ EE   R D+P RV E VE F+ C    C KLYW G  ++ A +K   +  +
Sbjct:  371 ASVLQLACADRVFVVDLIALEG-------------------------------------FAVIEALLRDPSVLKIGFGFKHDLHVLKQTFPDMTTFDFVHRILEIDAL---VRSSMPMYTGRSLSDAAALI------------------------------LGKPLDKAQQMSNWEKRPLTPKQIEYAALDAWVLVAIAERV----------------------SHNAEEQY-----------------------------------------LQLVTTLECDEPSATPTADIVRLRRARRQCKNGTMGLPSHDLGSMETTVNHL--------IEYVAAHGERLRLVP--RSR----------LSEYASDATTVFANSLC-IFADGAPYVA-------------VLPQETKMDLGLLSMVLGTSRKKVRLARPAECISVFGYAPGTVPPVAHSVPAPVLLDTSL----------------------------------EGRDRIVLGGGTPDMLLEASFDALVDL-GITSRVVPLSA------------------------------------------------------------------------------------QVEAQAGPRELKFVADTMLGRVAKWLRMTGVDIVQWD------KSDEKSQML-----------------VLATVEH--RIVLTRDRKLARQRQ----ALACYVVLSDNVEEQFQEIKKHFQIEFKEETFMSRCAKCNGKGFRIVSLEEAQTRGDVPARVLETVEEFYAC--HTCTKLYWVGPKYSTAHAKMKEIFHD 871          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: XP_002509152.1 (predicted protein [Micromonas commoda] >ACO70410.1 predicted protein [Micromonas commoda])

HSP 1 Score: 107.1 bits (266), Expect = 5.700e-19
Identity = 125/413 (30.27%), Postives = 170/413 (41.16%), Query Frame = 0
Query: 1291 TLTPLLVVSPAAAKVQFSRLASCLNIRRSSIRLATPEECISFFGFPPGAIPPVCHCTRTRLIIDQSLCMDVPPPRLATAXXXXXXXXXXXXXXXXXXXXXXXXXQRLLCGAGAKRRVFICQAAELLALGGSTSLVAPVCSVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEILFLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASS 1704
            T  P++ +     +     +AS   + R   RLATP+EC+  FGFPPG++PP+ H      ++D +L MD      A                             +  GAGA   VF C  A L     +T+L  PV     XXXXXXXXXXXXXXXXXXXXXX                                                                    +  F+ D  LGRL+RWLR LGVD E     +P      G     N C+            +LA A R  RV+LT+D+RL + +      V  FL++ +D ++QL +V   FG+R    +L++RC+ CN       T EE+AA   IP +VK +   FW C    C+K+YW G   + A S
Sbjct:  836 TWEPVVALLRGTDRADLRAIASHFGVARRHARLATPDECVRVFGFPPGSMPPLGHRVECPTLMDSAL-MDSALREHAGGF--------------------------VYPGAGAPHLVFRCLPAVLERATAATTL--PVAEXXXXXXXXXXXXXXXXXXXXXXXXXPSTASFADGGSLDWGLGGPSATSHEGSEEHEEHGDGTRER----------------------------QRRFVADGSLGRLARWLRCLGVDAE----HVPVPAQRLGNKGNNNNCQY---------GALLALAQRDDRVILTKDRRLLQRKD----AVAAFLVEDDDPKRQLARVSAHFGLRYRRGKLLTRCARCNGAVERRCTPEEVAANGAIPAKVKASTNEFWACGR--CEKVYWVGPKSHLAMS 1172          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: XP_008876612.1 (hypothetical protein H310_11653 [Aphanomyces invadans] >ETV94667.1 hypothetical protein H310_11653 [Aphanomyces invadans])

HSP 1 Score: 104.8 bits (260), Expect = 2.800e-18
Identity = 56/184 (30.43%), Postives = 100/184 (54.35%), Query Frame = 0
Query: 1527 FLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIE 1711
            FL DSMLGR+++WLR+ GVD+ LH +D+ +  + K                      +LA A    R++LTRD++LA+ R         +++  ++   Q +++  +FGI     E MSRC+ CN KG+  + + ++  R D+P++V + V+ F+ C  + C++LYW G  ++ A +K   + +
Sbjct:  716 FLADSMLGRVAKWLRMTGVDI-LH-WDIVANPNKK---------------------DMLALASSESRIILTRDRKLAQHRE----AFACYVVASDNVEMQFQEIKNYFGIEYHEAEFMSRCAKCNQKGFHIVETAQVVGRDDVPQKVLDTVDEFYEC--KTCRQLYWVGPKYSTAHAKMKQIFQ 870          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: XP_009838588.1 (hypothetical protein H257_12906 [Aphanomyces astaci] >ETV72145.1 hypothetical protein H257_12906 [Aphanomyces astaci])

HSP 1 Score: 100.9 bits (250), Expect = 4.100e-17
Identity = 59/185 (31.89%), Postives = 101/185 (54.59%), Query Frame = 0
Query: 1527 FLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDI-PERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIE 1711
            FL DSMLGR+++WLR+ GVD+ LH +D+ S+ ++K                      +LA A   GR+VLTRD++LA+ R         +++  +    Q +++ + FGI     E MSRC+ CN KG+  +   ++  R D+ P++V + V+ F+ C  + C++LYW G  ++ A +K   + +
Sbjct:  733 FLADSMLGRVAKWLRMTGVDI-LH-WDI-SVNANK--------------------HDMLALATGDGRIVLTRDRKLAQQR----AAFACYVVASDHVEAQFQEIKKHFGIEYHESEFMSRCAKCNQKGFNIVDVAQVVERADVPPQKVTDTVQEFYEC--QSCRQLYWVGPKYSTAQAKMKQIFQ 888          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: PNW86374.1 (hypothetical protein CHLRE_02g083900v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 100.9 bits (250), Expect = 4.100e-17
Identity = 64/169 (37.87%), Postives = 89/169 (52.66%), Query Frame = 0
Query: 1527 FLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKG 1696
            FL+DSMLGRL RWLR LG+D E      P      G   L                 + A+A   GRV LTRD+RLAE R          ++  +D +QQL+++ + FG+R D   +MSRC+ CNA  +  +  +E AAR+ +P RV + V+ FW C    C K++W G
Sbjct: 1402 FLLDSMLGRLCRWLRCLGLDAEYVGRTSP------GKQELAR---------------LTARAASEGRVFLTRDQRLAERRD----VAAPHVLGSDDPQQQLDELAQHFGVRFDEALVMSRCNACNAAAFQLVCPKE-AARELVPPRVYDLVDEFWRC--GCCGKVFWMG 1542          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: PNW86373.1 (hypothetical protein CHLRE_02g083900v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 100.9 bits (250), Expect = 4.100e-17
Identity = 64/169 (37.87%), Postives = 89/169 (52.66%), Query Frame = 0
Query: 1527 FLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKG 1696
            FL+DSMLGRL RWLR LG+D E      P      G   L                 + A+A   GRV LTRD+RLAE R          ++  +D +QQL+++ + FG+R D   +MSRC+ CNA  +  +  +E AAR+ +P RV + V+ FW C    C K++W G
Sbjct: 1487 FLLDSMLGRLCRWLRCLGLDAEYVGRTSP------GKQELAR---------------LTARAASEGRVFLTRDQRLAERRD----VAAPHVLGSDDPQQQLDELAQHFGVRFDEALVMSRCNACNAAAFQLVCPKE-AARELVPPRVYDLVDEFWRC--GCCGKVFWMG 1627          
BLAST of NO11G03110 vs. NCBI_GenBank
Match: OYT29305.1 (hypothetical protein B6U95_02550 [Thermofilum sp. ex4484_82] >OYT39223.1 hypothetical protein B6U96_02545 [Archaeoglobales archaeon ex4484_92])

HSP 1 Score: 98.6 bits (244), Expect = 2.000e-16
Identity = 63/195 (32.31%), Postives = 90/195 (46.15%), Query Frame = 0
Query: 1525 ILFLVDSMLGRLSRWLRVLGVDVELHDFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDKRLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGCNAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNKASSKFSTMIEEMKRRDWEI 1720
            + FL D MLGR++RWLR+LG D       L S LS                    T   ++  A +  RV+LT+D  L   RH    G++  L++GND    L  +++ FGI    +  +SRC  CN +       E    + DIPE   +  + FW C N  C+K YWKG MWN        + E++K   + I
Sbjct:   21 VKFLCDGMLGRIARWLRLLGYDT------LYSSLS--------------------TDEELVKLAEKEERVLLTKDVEL--YRHALKSGIKVLLVEGNDFETMLAHIIKCFGILPKINPELSRCPKCNGEMQHIPVDEAKKLKLDIPETTLKVYKDFWVCKN--CRKTYWKGRMWNNMIKTLERVKEKVKTSHFSI 185          
The following BLAST results are available for this feature:
BLAST of NO11G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24907.12.800e-11445.90Protein of unknown function DUF82 [Nannochloropsis... [more]
EWM24890.13.600e-9051.19hypothetical protein Naga_100116g7 [Nannochloropsi... [more]
XP_008606812.16.800e-2019.81hypothetical protein SDRG_02977 [Saprolegnia dicli... [more]
OQR92018.11.200e-1920.66hypothetical protein ACHHYP_04128 [Achlya hypogyna... [more]
XP_002509152.15.700e-1930.27predicted protein [Micromonas commoda] >ACO70410.1... [more]
XP_008876612.12.800e-1830.43hypothetical protein H310_11653 [Aphanomyces invad... [more]
XP_009838588.14.100e-1731.89hypothetical protein H257_12906 [Aphanomyces astac... [more]
PNW86374.14.100e-1737.87hypothetical protein CHLRE_02g083900v5 [Chlamydomo... [more]
PNW86373.14.100e-1737.87hypothetical protein CHLRE_02g083900v5 [Chlamydomo... [more]
OYT29305.12.000e-1632.31hypothetical protein B6U95_02550 [Thermofilum sp. ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001938NSK001938Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03110.1NO11G03110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|566462gene_5219Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100116g8gene5595Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03110.1NO11G03110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03110 ID=NO11G03110|Name=NO11G03110|organism=Nannochloropsis oceanica|type=gene|length=5603bp
AATCAAAAGGTGTCATGCCATGGCGATTTTGGGTCGCAAGCTGCGCCGAT
GGAGAAGAAGGGGCATGGAGTGTCCCAGCATCACAAAAAGGGGATGGGGC
AGTCTACGACGAGGCAGGTGACGAGAACGACGGCGGCACTGCGGTGACTG
TTCAACAAGGCATAGACGGAGGCGAATTACCCACACATGTATCGGAACCT
TATTGTATGCCCATGCAGGACATGACGGCCTTCTCGTTTGTGCCGGGCCA
CGTGCAGGTGGAGGAAAATCAGGAAGAATTCGGGAAGGAGGTGGAAGTCT
GCGACACAGACGAGCATGCCCGCCACGCGCAGACCCGCCATACACCACCA
TACAATGGTGATAACCAAGCATTTATTCCACATAGCTTAGATGAAGACTA
TGCTGCTCCTAAAACCGAGGGGGAGGAGGGCAACGATGACGAAATCTTGC
CCGCCATCCACCCAGTCGCCGATGACAATAATGCAGCCCACATGCAAGCA
CAGACCCACCAACTATACTCCTCAGTGCAGCCTTCACTCAACCCCGACTC
TCAGCTTGAGCTGTGCAAGGCCAAGATTCTGGACACCTTGCTACCCAAGG
CACGACTTTTAGATCCTTTGGGTGGTGGCGTGACGCACGGGGAGAAGTGG
GAGCTGGCCTCGAAGATCGAGCATTGGTTGGGGTGCGGGTTTAAGGCGAG
TAGGAGTAAAAATAGCACAAGCAGCAGTGGTACTCTTAGCAGAAGTGTTG
TGGACAGCAGTGTCACTAGGAGCAGCGACATCTGCAGCTGTAACGCAAGT
GGCGACAGGGCTAGTGGTGGTGAGTGTGATGATGAGGGCGAGGCAGCAGA
TGAGGGTTTTGCGACCAAACTACACCGGAGAAAGAAGAAGAACAAAGGGA
AGAAGAGGAATAAGGGGAGGAAGAAGTATCGAGGAAGTGGGACGGGGCAT
GTTGCCGTGCTGACCGACGCCGTGACTAGCTTGCTCGGCGCTGATCTTGA
TGCGTCGACCGGCAGTCGGGTTGGGGTATTAGGCTTGGTTTGCCTGCTGG
AGAAAGGGGTTTCGCCTCTATGCCTTTCTACCTGGCTGCAGGCCTTGCGG
GCCTCATGCTGCCTAAATGTACTCTTCCCTTCTTCGCCCTCTTTTCCGTC
CTCCTCCCTCGAGTACGCTCACGAAGACCGCCAGGTCATCACCGCCCTTC
TCGATCGCTGTCTCTCGGGGATATTCCATGGTCAGACCCGCGAGATTAGA
GCCAAGGCCATCGTCTCCGTCCTCGAAGCCACGAGCCCCACCATCCCATA
CCTCCGCGCACTCTCCGATCCTGCTGGTCCGCCTTTTGTCCAGCGTCTCC
TTAACGGGAATGCAGGCACCGCTGAGGTCAGAGCAGGAGGGGCCTTGGGT
GCATATCTGCGAGGACCGCTCTCGCTTCACAACCATTTCTTCCGCCTCGT
TCTTCTCTCCACTCCTCCAGAGATCGCACTCGACATTCTGAGGCGGTACC
AAGCGCAACAAGGACCTGCCGTCCTCAAGCCCCTTGGTATGGCGGAGGGG
TTGCTGCAGCTGCTCATGGCAAGGGGCCTGTACCGATCCGCCTATCTGAC
AGCACTGGAAATGAAGCTGCTAGAGACTTACCCTGTCGTGGAACGTGTGT
TTCGTGAGGATAAGATCAAAAAGCTGGTTGCTCGGGGCAAGTGGCAGTTC
GCGGTAATCATGCTGGAGGAAATGAAGGAACGGAGGGAGAAGAGGAAGAA
AGAAAGAGTGGAGAGGAGCGAAGAAGGAAGGGAGCAGAAGGAGGAGGAGG
AGCAGGAGCAGGAGCAGGAGCAAAGGAGATCGGATCGTAGAGATGATCCT
GCAGGGCAATTAATTCATTGTTTATGTGTCACGCTGGTGAGGGCATTGAT
GGCCCAGCCTGGTTTCTTGGCGCGGGCGGATGAGATACGGAAGCGGTATG
GGGTGGAGGAAGTGGAGGGGCCGTCGGTGGAGGCGTTAAGAAGAGAAGCG
AAAGAGAAAGAGGAGAAGTATATGGTGCTTCCCTGGATGCCTATTGCTGG
AGCGAAGGGAGAAGGAAGCGCTGGGAAAGGAGGAAGAGAAGGAGGAGGAG
GAGGAGGAGGAGCGGGGGCAGGAGGAGACGGAGTAGGGGAGAAGGGAGGG
AGCGACAACGGCATGTTACCACTGAGAGAGCCAGAATATGTTGGTATGGA
TGCGGATAGAGAAGAAATTGTCGATCCAGCAAGAGAAGCAGAAGAAGGGG
TACATGATGTTGCTGCTTTCGATAGGGATATGGGTGTAGTTGGTAAGAGA
ATTATCTTCGTGGACGATAGGGTCAGTCTGGGACAGGCAACAAGGGCCTT
GGCAGAAGCCAACAGGCGGGCACAGGAGGCATGGAGGGAGGGAAAGCCGG
AGGTGGTAGGGGTGGATGTAGAATGGCGCCCAGCCCTGTACGGTCGATGT
GAGGAGGAAGCATTGGAGGAGGTGGGAGTGTTGGAGGGAGAGCAAGGGAG
GCGAAATGGAAGTGTGACGAGTGTAGCGGAGGCAGACAAGGTGGAGTCCT
CCATTTCCTCTCTTTCCTCCACTTCCTCCTCTACCGTCATCACCACCACT
GAACGGCCCTCTACCAGCATCCCCACCATCACCACCACAACCACCATGAC
TGCAAGGGGCCTAGGAGCAGGGGCAGCAGGTCGTCGTGTCTTGGACCAAC
CTGACGAAAAAGCGAGTATACTCCAACTTGCCACACGGAACCAAGCATTC
ATCTTCGACCTTTGGGCTCTCTGTGGGGGCGCCAACACCAACAGCAACAA
GAGCGACAGCAACAATAACGACCCAAATAATGATGAGGTTGGCGGCAGTA
GCCCTACAACCCCTTGTCTAACTCTTCTGCAAGAACTAGACGCCTGCCTC
ATTTCCTTATTCGAGCACCCGCGCCTATTAAAACTTGGTTTTGGATTAAG
TGGAGACATGCAAGTGCTTCGTTCCTCGTGGCCAGGCATGGTTGCTTTTT
GCTCCCTCCGAGGAGCAGTGGAGCTGGGAGATTTAGGCGTGCCTGGGAGA
GGTGCGTTTCAGTGCCGAGGTGGTGCTGCAAGTAGTGGTCAGGGGAAAAA
GGGAAGAGGACGAGGACGAGGAGGTGGTGGAGGAGGATTTGGTGGTGGAG
GAGGAGGGCAATCACGGAGTTTGTCAGCGCTGTCAAAGGAATGGTTGGGC
AAGGAACTAGATAAAGGGGAACAAGTGTCCGATTGGGATGCCCGGCCCTT
GAGTGTCGCGCAGATGACGTATGCTGCCATGGATGCGTGGGTTTTGACGG
CGATTTTTGATGAGGCGTGTAGGAGAGATGCAAATCGTGCGCGATGGGTG
TGGAAAGAGAGGAGGCGGCTGATAGGGCAGAAGCAGCAGAATGTGGACAC
GGAGTATCCACCGTGTTGGGAACGAGGGAGTGAGGATGAGGAGGACGAGG
ATGAGGAGGACGAGGAGGGGGCAGATTTCTTTGTGGTCGAAGAGGACGAG
AAAGTGGAGAAGGATGAGGCGGGGGGGGAGGGAAGAGGAGGAAGAGGAGC
GAGTGACGACGGGGACAGCGCTGTGGTGGAAGCTTTCGTCCTTCAGGCAT
ACTCCGCGGGCCTCCTGCCTGTCCCTTCCTCTCCTGCCTCCTCCCACGCA
TCCACCTCTCCCTCTCCATCTCCCTCCTCTTCAACCTGCTCAATTGTGTT
TTTTAATGAGGGAGAGGAAGACACGAGCCTCCTCCCGCCTGATTTGAGCC
GGGCGTTACAGACCAAAAGTGTGGCATTGGTGATAAGCAGTAGCAGAAGT
AACAGCGGCACTAGCAGCAACAGCGACAGTTGCGGCAGCAGCGGCGATGG
CAGCGATTACGTCAGTAGTACTCCCCCCGCCGTAACTCTCACACCTCTTC
TGGTCGTGTCTCCTGCTGCAGCCAAAGTTCAATTCTCTCGGCTCGCCTCC
TGTTTAAACATCCGTCGTTCCAGCATCCGCCTCGCCACGCCCGAGGAATG
CATTTCATTTTTTGGATTTCCACCAGGTGCCATCCCTCCCGTCTGTCATT
GCACTCGTACACGCCTCATTATCGATCAGAGCCTCTGCATGGACGTGCCT
CCCCCTCGTCTGGCAACTGCTGCCGAGGCTACCACTGCCTTCTCGAGCCT
TTCTTCTCCCTCGAACCCCCCCTCCTCCCCCTCCTCGGCATCAGGACAGC
GGCTATTGTGCGGGGCAGGTGCCAAACGACGAGTGTTCATTTGCCAGGCG
GCGGAGCTTTTGGCGTTAGGGGGGTCCACTTCGCTAGTAGCGCCCGTGTG
TTCGGTTGCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCAT
CCAGTAGCACCTCATTATTAAAATTTTCGTCGCCCTATGCCTCCATCTCT
ACCTCGGCTAGTATGGAAATGAAAGAAAACATTTCTCCCGGCCTCCCATT
AGCAGCCGCGCGCGCCTTTGCTGTTACTGCCGTGACAGGTAGTGCGGCTG
CATCTGTTGTCAATATATCAGTCACCACAACATCTGCAGCAGCGGTGGCA
GCAGCAGCAGCAGGAGTGGAAGGGCAGGGAGATGAGATTTTATTTCTAGT
TGACTCCATGCTTGGACGCCTGTCACGGTGGCTCCGCGTGTTGGGCGTAG
ACGTTGAACTCCACGACTTCGACTTGCCCTCCATCCTTTCCCACAAGGGG
GCCAGCAGCCTGACCAACACGTGCAAGACCATTGTCCCTGCGCTTGTGGG
GACTCCGCCTCCGATTCTGGCAAAGGCCCACCGGACAGGGAGGGTTGTGT
TGACGCGAGACAAGCGGCTGGCGGAGAGCAGGCATAACACTTTATTGGGG
GTGAGGACGTTCTTGATTAAGGGAAATGATACCCGACAGCAATTAGAGCA
GGTGGTAAGGTGGTTTGGGATTCGACTGGATGCGGATGAGCTGATGAGTC
GATGCTCTGGGTGTAATGCCAAGGGGTATGTGGCATTGACATCTGAGGAG
ATTGCGGCGAGGAAGGACATACCGGAGAGGGTGAAGGAAAATGTGGAGAC
GTTCTGGACGTGTGTGAATGAGGGTTGTAAGAAGCTGTATTGGAAGGGGG
AGATGTGGAATAAAGCGAGTTCGAAATTCTCGACCATGATTGAGGAAATG
AAGAGGAGGGACTGGGAGATAGGGCGGGAAGGGGGAGGGAGGGAGGAGGA
GGGCGAGGAGGACGACGACGAGGACGACGACGAGGACGACGACGAGGACG
AGGAGGTGTAATGATGCTCCATCTTAATTGGAAAGAAAGGAAAGGGAATG
GGGAATATAAACACTTTGTGTACAGTAATGAGATGCTGTGTAGAGGCAGG
TAGGGACTCACACTGTACGGTGTGAGGCTGTGCGGACACAGGAATGGAGG
AAGGGGAAGGAGTAAAGGAAGGACCCATAGCCTGCGAGAATGTGAGCGCA
TACAATGTAATAGGAAAAATCGAACAGACACTGCCACAGGGGTGACATGC
AATAATTAAAATCAAAGAAGATGATGATGATGAAGAAGGAGAAGAAGAAG
GGGGGGGAGGGCATGAAGCCATGCAGACATACAAATATACACACGGATGC
AGA
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protein sequence of NO11G03110.1

>NO11G03110.1-protein ID=NO11G03110.1-protein|Name=NO11G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1749bp
MPWRFWVASCADGEEGAWSVPASQKGDGAVYDEAGDENDGGTAVTVQQGI
DGGELPTHVSEPYCMPMQDMTAFSFVPGHVQVEENQEEFGKEVEVCDTDE
HARHAQTRHTPPYNGDNQAFIPHSLDEDYAAPKTEGEEGNDDEILPAIHP
VADDNNAAHMQAQTHQLYSSVQPSLNPDSQLELCKAKILDTLLPKARLLD
PLGGGVTHGEKWELASKIEHWLGCGFKASRSKNSTSSSGTLSRSVVDSSV
TRSSDICSCNASGDRASGGECDDEGEAADEGFATKLHRRKKKNKGKKRNK
GRKKYRGSGTGHVAVLTDAVTSLLGADLDASTGSRVGVLGLVCLLEKGVS
PLCLSTWLQALRASCCLNVLFPSSPSFPSSSLEYAHEDRQVITALLDRCL
SGIFHGQTREIRAKAIVSVLEATSPTIPYLRALSDPAGPPFVQRLLNGNA
GTAEVRAGGALGAYLRGPLSLHNHFFRLVLLSTPPEIALDILRRYQAQQG
PAVLKPLGMAEGLLQLLMARGLYRSAYLTALEMKLLETYPVVERVFREDK
IKKLVARGKWQFAVIMLEEMKERREKRKKERVERSEEGREQKEEEEQEQE
QEQRRSDRRDDPAGQLIHCLCVTLVRALMAQPGFLARADEIRKRYGVEEV
EGPSVEALRREAKEKEEKYMVLPWMPIAGAKGEGSAGKGGREGGGGGGGA
GAGGDGVGEKGGSDNGMLPLREPEYVGMDADREEIVDPAREAEEGVHDVA
AFDRDMGVVGKRIIFVDDRVSLGQATRALAEANRRAQEAWREGKPEVVGV
DVEWRPALYGRCEEEALEEVGVLEGEQGRRNGSVTSVAEADKVESSISSL
SSTSSSTVITTTERPSTSIPTITTTTTMTARGLGAGAAGRRVLDQPDEKA
SILQLATRNQAFIFDLWALCGGANTNSNKSDSNNNDPNNDEVGGSSPTTP
CLTLLQELDACLISLFEHPRLLKLGFGLSGDMQVLRSSWPGMVAFCSLRG
AVELGDLGVPGRGAFQCRGGAASSGQGKKGRGRGRGGGGGGFGGGGGGQS
RSLSALSKEWLGKELDKGEQVSDWDARPLSVAQMTYAAMDAWVLTAIFDE
ACRRDANRARWVWKERRRLIGQKQQNVDTEYPPCWERGSEDEEDEDEEDE
EGADFFVVEEDEKVEKDEAGGEGRGGRGASDDGDSAVVEAFVLQAYSAGL
LPVPSSPASSHASTSPSPSPSSSTCSIVFFNEGEEDTSLLPPDLSRALQT
KSVALVISSSRSNSGTSSNSDSCGSSGDGSDYVSSTPPAVTLTPLLVVSP
AAAKVQFSRLASCLNIRRSSIRLATPEECISFFGFPPGAIPPVCHCTRTR
LIIDQSLCMDVPPPRLATAAEATTAFSSLSSPSNPPSSPSSASGQRLLCG
AGAKRRVFICQAAELLALGGSTSLVAPVCSVAFSSSSSSSSSSSSSSSTS
LLKFSSPYASISTSASMEMKENISPGLPLAAARAFAVTAVTGSAAASVVN
ISVTTTSAAAVAAAAAGVEGQGDEILFLVDSMLGRLSRWLRVLGVDVELH
DFDLPSILSHKGASSLTNTCKTIVPALVGTPPPILAKAHRTGRVVLTRDK
RLAESRHNTLLGVRTFLIKGNDTRQQLEQVVRWFGIRLDADELMSRCSGC
NAKGYVALTSEEIAARKDIPERVKENVETFWTCVNEGCKKLYWKGEMWNK
ASSKFSTMIEEMKRRDWEIGREGGGREEEGEEDDDEDDDEDDDEDEEV*
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Synonyms
Publications