NO11G03090, NO11G03090 (gene) Nannochloropsis oceanica

Overview
NameNO11G03090
Unique NameNO11G03090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length702
Alignment locationchr11:966990..967691 -

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Properties
Property NameValue
DescriptionUracil phosphoribosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:966990..967691 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
BLAST of NO11G03090 vs. NCBI_GenBank
Match: EPY41648.1 (uracil phosphoribosyltransferase [Angomonas deanei])

HSP 1 Score: 191.8 bits (486), Expect = 2.400e-45
Identity = 98/219 (44.75%), Postives = 144/219 (65.75%), Query Frame = 0
Query:    5 PNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLP--VHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222
            P     +PQ     YLFT IR+ ++    F FYS RIM ++ E AL L+P     V TPT  ++ G +   +E  +  VSI+RAG+S+    R++     +GKIL+QRDE+S +K P   + YSKLP D+ TR V+L DPM+ TGGSA+ A +I++Q+ GV  + I+F+ +VA+P G++    R+P++Q V  AID+G+NEE+YI+PGLGDFGDR++ T
Sbjct:   24 PGQVHLLPQTPQLHYLFTVIRNRETQRTDFVFYSERIMRLILEAALCLIPMHTKNVVTPTGDVYKGVQ--PDEQGIIGVSILRAGESMERVLREMCRGVRIGKILVQRDEASEDKAPDSRYNYSKLPKDVATRHVLLLDPMIATGGSAIKATEILIQEYGVKEENIIFLNLVAAPAGIKRYLGRFPKIQFVTAAIDDGMNEERYIVPGLGDFGDRYFGT 240          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: KIK85687.1 (hypothetical protein PAXRUDRAFT_831945 [Paxillus rubicundulus Ve08.2h10])

HSP 1 Score: 191.4 bits (485), Expect = 3.100e-45
Identity = 104/219 (47.49%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    2 PTPPNSCVF-VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            P  P   VF +PQ      L+T IRD  +S   F FYS+RI+ +L EE L  +P  P  VETPT + + G   +  E R+C VSI+RAG+++    R++     +GKILIQRDE +   LP  +YSKLP DI +R+V+L DPML TGGSA+ A++I+ ++ GV  +RI+F+ +VA+PEGL+A   ++P ++V+ G ID+GLNE+ YI+PGLGDFG+R Y
Sbjct:   13 PAAPFPSVFTLPQTAQLEALYTIIRDKTTSRGDFIFYSNRIIRLLVEEGLNHLPVVPKAVETPTGSKYEG---VSFEGRICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDEET--ALPKLFYSKLPEDIASRYVLLLDPMLATGGSAMKAVEIL-KEHGVLEERIIFINLVAAPEGLKAFSTKFPALRVITGWIDKGLNEKAYIIPGLGDFGERRY 225          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: OAI97159.1 (hypothetical protein A4X13_g8962 [Tilletia indica] >OAJ18942.1 hypothetical protein A4X09_g2715 [Tilletia walkeri])

HSP 1 Score: 191.4 bits (485), Expect = 3.100e-45
Identity = 99/217 (45.62%), Postives = 146/217 (67.28%), Query Frame = 0
Query:    4 PPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYN 221
            PPN+   +PQ        T IRD K+  E F FYS RI+ +L EE L  +P+ P  ++TPT   + G   +  + R+C VSI+RAG+++    R+      +GKILIQRDE + +  P  +Y+KLP DI  R+V+L DPML TGGSAL A+ +++   GV  +RI+F+ +VASPEGL+A++  +PEV+ ++G +DEGL+E+ YI+PGLGDFGDR+++
Sbjct:   16 PPNA-TRLPQTNQLNACLTIIRDQKTPREQFIFYSDRIIRLLVEEGLNHLPTNPLTIQTPTGLPYTG---VSFQGRICGVSILRAGEAMEAGLRECCRSVRIGKILIQRDEETAK--PKLFYAKLPEDIKERWVLLLDPMLATGGSALQAIKVLIDH-GVKAERILFLNLVASPEGLEAIYKEFPEVRTISGWVDEGLDEKSYIIPGLGDFGDRYFS 225          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: XP_003686112.1 (hypothetical protein TPHA_0F01960 [Tetrapisispora phaffii CBS 4417] >CCE63678.1 hypothetical protein TPHA_0F01960 [Tetrapisispora phaffii CBS 4417])

HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45
Identity = 97/216 (44.91%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    4 PPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            P  + + +PQ      L+T IRD ++S   F FYS RI+ +L EE L  +P     V+T T  +F G   +    ++C VSI+RAG+S+ +  R+      +GKILIQRDE +   LP  +Y KLP DI  RFV L DPML TGGSA+ A D+++++ GV P+RI F+ ++ S EG+   H  +P+V++V GA+D GL+E KY++PGLGDFGDR+Y
Sbjct:    5 PFKNVILLPQTNQLLGLYTIIRDKRTSRPDFIFYSDRIIRLLVEEGLNYLPVQAKSVDTETNEVFEGVSFM---GKICGVSIVRAGESMEQGLRECCRSVRIGKILIQRDEET--ALPKLFYEKLPEDISERFVFLLDPMLATGGSAIMATDVLIKR-GVKPERIFFLNLICSKEGIDKYHEAFPDVKIVTGAVDRGLDENKYLIPGLGDFGDRYY 214          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: CDO55385.1 (similar to Saccharomyces cerevisiae YHR128W FUR1 Uracil phosphoribosyltransferase [Galactomyces candidum])

HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45
Identity = 95/214 (44.39%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    6 NSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            ++ + +PQ      L+T IRD  +    F FY+ RI+ +L EE L  +P  P  +ETPT A F G +    + ++C VSI+RAG+S+ +  R+      +GKILIQRDE + +  P  +Y KLP DID R+V L DPML TGGSA  A+D++ ++ GV  +RI+F+ ++A+PEG++    ++P+V+++ GAID+ L+E+KYI PGLGDFGDR+Y
Sbjct:    2 SNVIVLPQTNQLKGLYTIIRDRNTKRSDFIFYADRIIRLLVEEGLNQLPVEPAAIETPTGAAFPGVKF---QGKICGVSIMRAGESMEQGLRECCRSVRIGKILIQRDEETAQ--PKLFYDKLPADIDNRYVFLLDPMLATGGSAAMAVDVL-KERGVPEERILFLNLLAAPEGIKLFTEKFPQVKIITGAIDDCLDEKKYISPGLGDFGDRYY 209          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: CUG93954.1 (uracil phosphoribosyltransferase, putative [Bodo saltans])

HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45
Identity = 98/214 (45.79%), Postives = 139/214 (64.95%), Query Frame = 0
Query:   11 VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLP--VHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNTT 223
            +PQ     +L T+IRD  SS E + F++ R++ ++ EE L  +P A   V TPTQ  + G + +     +C VSI+RAG+S+ +A R+      +GKILIQRDE++ +K P     YSK+P DI  R V L DPML TGGSA  A +I++ +  V  + I+F+ VV+ PEGL    +R+P++ VV  AID+GLNE KYI+PGLGDFGDR++ TT
Sbjct:   15 IPQSNQVRFLHTRIRDATSSREDYVFFADRLIRLIVEEGLNCIPVADLEVNTPTQVPYNGVKSVH---GICGVSIMRAGESMEQALRETCRGVRIGKILIQRDETTADKAPDTRFSYSKVPLDIHERIVFLMDPMLATGGSAAKAAEILIDKYKVKEENIIFLNVVSCPEGLTNFSSRFPKILVVTSAIDDGLNEHKYILPGLGDFGDRYFGTT 225          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: SCW03519.1 (LAFE_0G12266g1_1 [Lachancea fermentati])

HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45
Identity = 101/220 (45.91%), Postives = 142/220 (64.55%), Query Frame = 0
Query:    1 MPTPPNSCVF-VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            M + P+  VF +PQ      L+T IRD  +    F FYS RI+ +L EE L  +P  P  VET T  +F G   +    ++C VSI+RAG+S+ +  R+      +GKILIQRDE +   LP  +Y KLP DI  R+V L DPML TGGSA+ A D+++++ GV P+RI F+ ++ SPEG++  H+++P V++V GAID  L+E KY+ PGLGDFGDR+Y
Sbjct:    1 MSSEPHKNVFLLPQTNQLLGLYTIIRDRDTKRPDFIFYSDRIIRLLVEEGLNHLPVTPRTVETATNQIFRGVSFL---GKICGVSIVRAGESMEQGLRECCRSVRIGKILIQRDEET--ALPKLFYEKLPDDIADRYVFLLDPMLATGGSAMMATDVLIKR-GVKPERIFFLNLICSPEGIENYHSKFPNVKIVTGAIDACLDENKYLAPGLGDFGDRYY 214          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: PPR02999.1 (hypothetical protein CVT24_012328 [Panaeolus cyanescens])

HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45
Identity = 101/217 (46.54%), Postives = 145/217 (66.82%), Query Frame = 0
Query:    1 MPTPPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDR 218
            M + P S   +PQ      L+T IRD  +S   F FYS RI+ +L EE L  +P     VETPT A + G   +  E ++C VSI+RAG+++    R++     +GKILIQRDE +   LP  +YSK PPDI +R+V+L DPML TGGSA+ A++++++Q GV  +RI+F+ ++ASPEGL    ++YP ++V+ G ID+GLNE+ YI+PGLGDFG+R
Sbjct:   27 MKSLPPSVFTLPQTAQLEALYTIIRDKNTSRGDFLFYSDRIIRLLVEEGLNHLPVVDKTVETPTGATYHG---VGFEGKICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDEET--TLPKLFYSKFPPDIASRYVLLLDPMLATGGSAMKAVEVLMEQ-GVPEERIIFINLIASPEGLSTFCSKYPSLKVITGWIDQGLNEKAYIIPGLGDFGER 237          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: AGO13201.1 (AaceriAFR052Cp [Saccharomycetaceae sp. 'Ashbya aceri'])

HSP 1 Score: 190.3 bits (482), Expect = 6.900e-45
Identity = 97/217 (44.70%), Postives = 141/217 (64.98%), Query Frame = 0
Query:    3 TPPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            TP N+   +PQ      L+T IRD ++    F FY+ RI+ +L EE L  +P  P  VET T   + G   +    ++C VSIIRAG+S+ +  R       +GKILIQRDE +   LP  +Y KLP DI  R+V L DPML TGGSA+ A ++++++ GV P+RI F+ ++   EG+ A  AR+P+++++ GAID+GL+E+KY++PGLGDFGDR+Y
Sbjct:    4 TPSNNVHLLPQTNQLLGLYTIIRDRRTKRPDFIFYADRIIRLLVEEGLNQLPVMPATVETHTSQKYDGVSFL---GKICGVSIIRAGESMEQGLRDCCRSVRIGKILIQRDEET--ALPKLFYEKLPEDIADRYVFLLDPMLATGGSAIMATEVLIKR-GVRPERISFLNLICCQEGIDAYRARFPDIKIITGAIDKGLDEQKYLVPGLGDFGDRYY 214          
BLAST of NO11G03090 vs. NCBI_GenBank
Match: KIJ29731.1 (hypothetical protein M422DRAFT_36868 [Sphaerobolus stellatus SS14])

HSP 1 Score: 190.3 bits (482), Expect = 6.900e-45
Identity = 101/216 (46.76%), Postives = 145/216 (67.13%), Query Frame = 0
Query:    4 PPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFY 220
            PPN  + +PQ      L+T IRD ++S   F FY+ RI+ +L EE L  +P  P  VETPT A + G   +  E R+C VSI+RAG+++    R++     +GKILIQRDE +   LP  +YSK P DI +R+V+L DPML TGGSA+ A++++ Q  GV  +RI+F+ +++SPEGL+    R+P ++++ G IDEGLNE+ YI+PGLGDFG+R Y
Sbjct:   16 PPN-VITLPQTAQLEALYTIIRDKETSRGDFIFYTDRIIRLLVEEGLNHLPVVPRTVETPTGAKYEG---VGFEGRICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDEET--TLPKLFYSKFPSDIASRYVLLLDPMLATGGSAMKAVEVL-QSEGVPEERIIFINLISSPEGLKKFCERFPSLKIITGWIDEGLNEKAYIIPGLGDFGERRY 224          
The following BLAST results are available for this feature:
BLAST of NO11G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EPY41648.12.400e-4544.75uracil phosphoribosyltransferase [Angomonas deanei... [more]
KIK85687.13.100e-4547.49hypothetical protein PAXRUDRAFT_831945 [Paxillus r... [more]
OAI97159.13.100e-4545.62hypothetical protein A4X13_g8962 [Tilletia indica]... [more]
XP_003686112.15.300e-4544.91hypothetical protein TPHA_0F01960 [Tetrapisispora ... [more]
CDO55385.15.300e-4544.39similar to Saccharomyces cerevisiae YHR128W FUR1 U... [more]
CUG93954.15.300e-4545.79uracil phosphoribosyltransferase, putative [Bodo s... [more]
SCW03519.15.300e-4545.91LAFE_0G12266g1_1 [Lachancea fermentati][more]
PPR02999.15.300e-4546.54hypothetical protein CVT24_012328 [Panaeolus cyane... [more]
AGO13201.16.900e-4544.70AaceriAFR052Cp [Saccharomycetaceae sp. 'Ashbya ace... [more]
KIJ29731.16.900e-4546.76hypothetical protein M422DRAFT_36868 [Sphaerobolus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001941NSK001941Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03090.1NO11G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591762gene_5216Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100116g10gene5593Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03090.1NO11G03090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03090 ID=NO11G03090|Name=NO11G03090|organism=Nannochloropsis oceanica|type=gene|length=702bp
ATGCCCACCCCACCAAACTCCTGTGTCTTCGTCCCCCAGTGCCGCTCCTT
CCCGTACCTTTTCACCAAAATCCGCGACCTGAAGAGTTCCAACGAAAGTT
TTGCCTTTTATTCCTCGCGTATCATGACGGTCTTGGCCGAAGAGGCGTTG
GGTTTGGTTCCCTCCGCCCCTTTCCCTGTCGAGACCCCAACCCAAGCAAT
GTTTGCTGGCACGCGTCTTATCGAAGAGGAAAGCCGGCTTTGCCTCGTTT
CCATCATTCGAGCGGGAGACAGTCTAATGGAAGCCGCTCGTAAACTTGTT
CCTCAGGCCGCGGTGGGGAAAATCCTGATTCAGCGTGACGAGAGCAGCCG
GGAGAAGTTGCCTGTTCATTACTACTCGAAACTCCCTCCTGACATTGATA
CTCGCTTCGTCATCCTGTGCGATCCCATGCTCGGCACGGGCGGAAGTGCA
CTGTGTGCACTTGATATAATCGTCCAACAAGGGGGCGTGTCACCGAAGCG
AATAGTGTTTGTGTGTGTGGTGGCCTCGCCGGAGGGGCTACAAGCCCTGC
ATGCGCGATACCCGGAAGTACAGGTCGTGGCAGGCGCGATAGATGAGGGG
TTGAATGAGGAGAAGTACATCATGCCGGGGCTGGGCGACTTTGGAGATCG
ATTTTATAACACCACCACCTCGACGTGGTTGAAAAAGGAGGTGGAGGGAT
AG
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protein sequence of NO11G03090.1

>NO11G03090.1-protein ID=NO11G03090.1-protein|Name=NO11G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bp
MPTPPNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEAL
GLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLV
PQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSA
LCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEG
LNEEKYIMPGLGDFGDRFYNTTTSTWLKKEVEG*
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Synonyms
Publications