NO11G03090, NO11G03090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03090 vs. NCBI_GenBank
Match: EWM24887.1 (uracil phosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 312.4 bits (799), Expect = 1.200e-81 Identity = 144/218 (66.06%), Postives = 184/218 (84.40%), Query Frame = 0 Query: 5 PNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNTT 223 P+ V VP C SFPYL+TKIRD K+SN+ FA Y+SRI+ +LAEEA+G+VPS+P ++TPT +AG R +++E+ LC+VSI+RAGD+LMEA R +VPQAAV KILIQRDESS EKLP +YSK+P D+++RF ILCDPML TGGSALCAL I++Q+G V P I+FVCVVA+PEG++A+H R+PEV++V GAID GLNE+KYI+PGLGDFGDR+YNTT Sbjct: 47 PDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNTT 264
BLAST of NO11G03090 vs. NCBI_GenBank
Match: XP_002288515.1 (probable uracil phosphoribosyltransferase [Thalassiosira pseudonana CCMP1335] >EED93951.1 probable uracil phosphoribosyltransferase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 208.0 bits (528), Expect = 3.200e-50 Identity = 106/214 (49.53%), Postives = 149/214 (69.63%), Query Frame = 0 Query: 11 VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLI--EEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDI-DTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 V + ++ LFTKIRD +++ F YS R M +LAEE + +P+ P V TPT + G I + ++C VSI+RAGDSL+E+ R+++P VGK+ IQR+ESS K VH +KLP + + VILCDPML TGGS++ ALDI+V++ GV P++IVF V+ PEGL+AL + YP+V++V +D+GLNE KYI+PGLGD+GDRF+NT Sbjct: 18 VMKSKALAILFTKIRDEQTNAADFVNYSKRAMRLLAEETISYLPATPHTVTTPTNVPYHGQLSIVDTDPDKVCAVSIVRAGDSLLESFREIIPGLRVGKLWIQRNESSTTKEAVHSCTKLPKGMSEMTSVILCDPMLATGGSSITALDILVKEHGVQPEKIVFANVICCPEGLEALASAYPKVKIVTSWVDDGLNESKYILPGLGDYGDRFFNT 231
BLAST of NO11G03090 vs. NCBI_GenBank
Match: OEU21918.1 (uracil phosphoribosyltransferase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 205.3 bits (521), Expect = 2.100e-49 Identity = 104/202 (51.49%), Postives = 142/202 (70.30%), Query Frame = 0 Query: 20 LFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 LFTK+RD +S F YS R M +LAE+AL PS + TP F G R + + +C VSIIR+GD+L+E R++ P VGKILIQRDES EK +YSKLPPDI ++V+LCDPML TGGSA+ A++++V+Q V P RI+F ++ +PEGL+ L YPE+++V AID+ LN+EK+I+PGLGD+GDRF+N+ Sbjct: 31 LFTKMRDTSTSPADFVQYSKRSMRILAEDALAEFPSTEVKITTPC-GSFDGVR-GPDPTDICAVSIIRSGDALLEVVREVEPAVRVGKILIQRDESIPEKTAKLFYSKLPPDIANQYVLLCDPMLATGGSAMKAIEVLVEQYNVKPSRILFANMICAPEGLKLLGDAYPEIKIVTAAIDDCLNDEKFIVPGLGDYGDRFFNS 230
BLAST of NO11G03090 vs. NCBI_GenBank
Match: EJK45890.1 (hypothetical protein THAOC_35475 [Thalassiosira oceanica]) HSP 1 Score: 204.5 bits (519), Expect = 3.500e-49 Identity = 101/213 (47.42%), Postives = 143/213 (67.14%), Query Frame = 0 Query: 11 VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLI--EEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 V Q +F LFTKIRD K+S+ F YS R+M +LAEE+L +P + TPT A + G I + +C VSI+RAGDSL+E+ R++ P VGK+ IQR+E+S EK +H +KLPP + ++LCDPML +GGS+ ALD ++ GV P+R+VF V++ PEGL L YP+V++V +DE LN+ K+I+PGLGD+GDR++NT Sbjct: 10 VVQSAAFDVLFTKIRDEKTSSADFGRYSRRLMRILAEESLSKLPKTVVDITTPTGAAYKGRLSIVDTDPDSVCAVSIVRAGDSLLESVREIAPSIRVGKMWIQRNEASAEKEAIHSCTKLPPGVKDMDIVLCDPMLASGGSSCSALDCLINTYGVDPRRVVFANVISCPEGLNRLAHEYPDVRIVTCWVDEKLNDSKFILPGLGDYGDRYFNT 222
BLAST of NO11G03090 vs. NCBI_GenBank
Match: GAX29083.1 (uridine kinase [Fistulifera solaris]) HSP 1 Score: 203.4 bits (516), Expect = 7.900e-49 Identity = 102/209 (48.80%), Postives = 139/209 (66.51%), Query Frame = 0 Query: 13 QCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 Q ++ LFTK+RD +S F YS R+M +L E+ L +P+ +TPT +F G S+ C+VSI+R+GD+L+E+ R++ P VGKILIQRDE+S +K +Y KLPP I VILCDPM+ T GSA+ ALD++ Q V P +I F ++ +PEGL L +YPEV++V AIDE LN+EK+I+PGLGDFGDRFY T Sbjct: 13 QSKALRLLFTKLRDKNTSQVDFVQYSKRLMRLLVEDTLASLPTVEIERQTPT-GLFKGLESTTIPSQTCVVSIMRSGDALLESFREVEPAFKVGKILIQRDEASADKTAQFFYEKLPPGIHEMNVILCDPMVATAGSAIAALDLLCQVKHVDPSQITFATIICAPEGLGVLARKYPEVKIVTAAIDESLNDEKFIVPGLGDFGDRFYGT 220
BLAST of NO11G03090 vs. NCBI_GenBank
Match: GAX16592.1 (uracil phosphoribosyltransferase [Fistulifera solaris]) HSP 1 Score: 197.2 bits (500), Expect = 5.600e-47 Identity = 100/209 (47.85%), Postives = 138/209 (66.03%), Query Frame = 0 Query: 13 QCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 Q ++ LFTK+RD +S F YS R+M +L E+ L +P+ +TPT +F G S+ C+VSI+R+GD+L+E+ R++ P VGKILIQRDE+S +K +Y K+PP I VILCDPM+ T GSA+ ALD++ Q V P +I F ++ + EGL L +YP V++V AIDEGLN+EK+I+PGLGDFGDRFY T Sbjct: 13 QSKALRLLFTKLRDKNTSQIDFVRYSKRLMHLLVEDTLVRLPTVEIEKQTPT-GLFQGLESTTIPSQTCVVSIMRSGDALLESFREVEPAFKVGKILIQRDEASADKTAQFFYEKVPPGIHKMNVILCDPMVATAGSAVAALDLLCQVKHVDPSQITFATIICATEGLGVLARKYPGVKIVTAAIDEGLNDEKFILPGLGDFGDRFYGT 220
BLAST of NO11G03090 vs. NCBI_GenBank
Match: CBN75727.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 196.8 bits (499), Expect = 7.400e-47 Identity = 104/207 (50.24%), Postives = 142/207 (68.60%), Query Frame = 0 Query: 11 VPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDR 218 V + ++ +LFT+IR+ + F FY++R+M +LAEE + + S+ + TPT A F+ ES +C+VSI+RAGD+L EAAR +P A VGKILIQRDE S +K PV +Y KLP I V+LCDPML TGGSAL A+ +V + GV IVF+ VV PEG+ A+ A +PEV +V GA+D+ L+E++YI+PGLGDFGDR Sbjct: 111 VCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSP--FVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIGKMQVLLCDPMLATGGSALMAIRCLV-EAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDR 314
BLAST of NO11G03090 vs. NCBI_GenBank
Match: KYQ31501.1 (Uracil phosphoribosyltransferase [Hypsizygus marmoreus]) HSP 1 Score: 192.6 bits (488), Expect = 1.400e-45 Identity = 101/217 (46.54%), Postives = 146/217 (67.28%), Query Frame = 0 Query: 5 PNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLPVHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 P S +PQ L+T IRD ++S F FYS RI+ +L EE L +P VETPT A++ G + E ++C VSI+RAG+++ R++ +GKILIQRDE + LP +YSK P DI +R+V+L DPML TGGSA+ A++++++ GV +RI+F+ ++ASPEGL A+YP+++V+ G ID+GLNE+ YI+PGLGDFG+R Y T Sbjct: 28 PKSVFTLPQTAQLEALYTIIRDKETSRGDFLFYSDRIIRLLVEEGLNHLPVVKRTVETPTGAIYEG---VGFEGKICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDEET--ALPKLFYSKFPQDIASRYVLLLDPMLATGGSAMKAVEVLIEH-GVPEERIIFINLIASPEGLTTFCAKYPQLKVITGWIDQGLNEKAYIIPGLGDFGERRYCT 238
BLAST of NO11G03090 vs. NCBI_GenBank
Match: EPY31626.1 (uracil phosphoribosyltransferase [Strigomonas culicis] >EPY34175.1 uracil phosphoribosyltransferase [Strigomonas culicis]) HSP 1 Score: 192.2 bits (487), Expect = 1.800e-45 Identity = 95/219 (43.38%), Postives = 144/219 (65.75%), Query Frame = 0 Query: 5 PNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLP--VHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 P +PQ +LFT IR++++ F FYS RIM ++ E AL L+P P ++TPT A++ G R + + VSI+RAG+S+ R++ +GKIL+QRDE S +K P + YSK+P D+ +R V+L DPM+ TGGSA+ A +I+ QQ V + I+F+ +VA+PEG++ R+P VQ + AID+G+N+++YI+PGLGDFGDR++ T Sbjct: 31 PGQLHLLPQTPQLHFLFTVIRNVETQRTDFVFYSERIMRLILEAALCLIPVQPCNIKTPTGAVYQGVR--PDAKGIIGVSILRAGESMERVLREMCRGVRIGKILVQRDEKSEDKSPDERYNYSKMPKDVSSRHVLLMDPMIATGGSAIKATEILTQQYAVPEENIIFLNLVAAPEGIRRYLTRFPRVQFITAAIDDGMNDQRYILPGLGDFGDRYFGT 247
BLAST of NO11G03090 vs. NCBI_GenBank
Match: EPY33260.1 (uracil phosphoribosyltransferase [Strigomonas culicis]) HSP 1 Score: 192.2 bits (487), Expect = 1.800e-45 Identity = 95/219 (43.38%), Postives = 144/219 (65.75%), Query Frame = 0 Query: 5 PNSCVFVPQCRSFPYLFTKIRDLKSSNESFAFYSSRIMTVLAEEALGLVPSAPFPVETPTQAMFAGTRLIEEESRLCLVSIIRAGDSLMEAARKLVPQAAVGKILIQRDESSREKLP--VHYYSKLPPDIDTRFVILCDPMLGTGGSALCALDIIVQQGGVSPKRIVFVCVVASPEGLQALHARYPEVQVVAGAIDEGLNEEKYIMPGLGDFGDRFYNT 222 P +PQ +LFT IR++++ F FYS RIM ++ E AL L+P P ++TPT A++ G R + + VSI+RAG+S+ R++ +GKIL+QRDE S +K P + YSK+P D+ +R V+L DPM+ TGGSA+ A +I+ QQ V + I+F+ +VA+PEG++ R+P VQ + AID+G+N+++YI+PGLGDFGDR++ T Sbjct: 22 PGQLHLLPQTPQLHFLFTVIRNVETQRTDFVFYSERIMRLILEAALCLIPVQPCNIKTPTGAVYQGVR--PDAKGIIGVSILRAGESMERVLREMCRGVRIGKILVQRDEKSEDKSPDERYNYSKMPKDVSSRHVLLMDPMIATGGSAIKATEILTQQYAVPEENIIFLNLVAAPEGIRRYLTRFPRVQFITAAIDDGMNDQRYILPGLGDFGDRYFGT 238 The following BLAST results are available for this feature:
BLAST of NO11G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03090 ID=NO11G03090|Name=NO11G03090|organism=Nannochloropsis oceanica|type=gene|length=702bpback to top protein sequence of NO11G03090.1 >NO11G03090.1-protein ID=NO11G03090.1-protein|Name=NO11G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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