NO11G02970, NO11G02970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02970 vs. NCBI_GenBank
Match: EWM24927.1 (undecaprenyl diphosphate synthase [Nannochloropsis gaditana]) HSP 1 Score: 372.1 bits (954), Expect = 1.800e-99 Identity = 188/279 (67.38%), Postives = 223/279 (79.93%), Query Frame = 0 Query: 47 FLHRNLHLHRHLKA---ARTALPPSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRVTECQPAAAATTEQQGG 323 F+H+N H + K LP +V VP+H+A +LDGNGRWA+++GLPRGAGH EG +RA +VL++CQALGIRTVTLYCLSTENWSRP AEI +IL C+E +LR NL+YAH NRIRLVVIGQ HRLP +LQALV++AE ETA YT +GMTVCLALSYGGRDDIVQA R LA+Q A GE+ P++IDE LFES LST KG+ PDLV+RTSGEQRWSNFMLFECAYSEF+V++ LWPDF++ +LLAALESYG RRRRFG V E +A TEQ G Sbjct: 71 FVHQNNHHYHEFKEPIDEVRILPRNVEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYT--EGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVRE--KRSALETEQVVG 345
BLAST of NO11G02970 vs. NCBI_GenBank
Match: PLX80304.1 (isoprenyl transferase [Desulfuromonas sp.]) HSP 1 Score: 225.3 bits (573), Expect = 2.700e-55 Identity = 109/234 (46.58%), Postives = 159/234 (67.95%), Query Frame = 0 Query: 71 VPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFG 305 +P+HLA+++DGNGRWA+QR LPR AGH G + +++ C+ +G+ +TLY S+ENW RP E+ ++ + + LR L+ NRIRL VIGQ+ RLP ++ A++ A+TA ++ MT+ LALSYG RD+IV+ R LA +VA GE+ PE+IDET+ + L T G+L PDL++RTSGE R SNF+L++ AY+E S+ WPDF ++ LL L+ + R+RRFG Sbjct: 3 IPQHLAIIMDGNGRWAEQRRLPRIAGHRRGVEAVHEIVTVCREIGVGNLTLYAFSSENWGRPDDEVSALMSLLSHYLRGELKTMLDNRIRLNVIGQIDRLPANVAAVLRETIAKTADNSE---MTLTLALSYGARDEIVRTVRKLANKVAVGEITPEDIDETMLSAALDT---GMLPDPDLLIRTSGEMRISNFLLWQLAYTELIFSDLFWPDFDRKALLDCLKEFSCRQRRFG 230
BLAST of NO11G02970 vs. NCBI_GenBank
Match: KXK33199.1 (undecaprenyl pyrophosphate synthase [Chlorobi bacterium OLB6]) HSP 1 Score: 223.0 bits (567), Expect = 1.400e-54 Identity = 111/237 (46.84%), Postives = 157/237 (66.24%), Query Frame = 0 Query: 71 VPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRVT 308 +P+H+A+++DGNGRWAQ RG PR AGH EG + V+K LG++ +TLY S ENW RP AE+ ++ +E LR L+ H+N +R+ IG++ LP +Q ++T A T + G+T+ LALSYG R DIV+A + +A V G++ PE++ E LF S L T L PDLV+RTSGEQR SNF+L+E AYSE +V+ LWP+FR+E+LL A+ Y R RRFG+++ Sbjct: 32 LPKHVAVIMDGNGRWAQDRGKPRIAGHREGMESVRAVVKASSQLGVQYLTLYAFSIENWKRPPAEVRFLMSLLETYLRRELDELHRNNVRVCCIGKISALPRGVQRILTDAVEHT---RENTGLTLTLALSYGSRWDIVRAVQIVALDVRRGKLSPEDLTEDLFASYLQT---ASLPNPDLVIRTSGEQRLSNFLLWESAYSEIYVTSVLWPEFRREHLLRAIVEYACRERRFGKIS 262
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_026653220.1 (isoprenyl transferase [Butyrivibrio proteoclasticus]) HSP 1 Score: 222.6 bits (566), Expect = 1.800e-54 Identity = 103/240 (42.92%), Postives = 160/240 (66.67%), Query Frame = 0 Query: 71 VPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRVTECQ 311 +PEH+A++LDGNGRWA+ +G+PR GHM+G + D+L + LGI+ +T+Y STENW+RP+AE+ ++ + N L+ +++ + KN +R VIG+ L +QA + E TAG T G+T +A++YG RD+I +A R +AK+V G++ PE+I E + L T+ L PDL++RT EQR SN++L++CAY+EF+ + WPDF + L+ A+ESYG R R+FG + + Q Sbjct: 7 IPEHVAIILDGNGRWAKAKGMPRNYGHMQGAKAVEDILVDARDLGIKYLTVYAFSTENWTRPEAEVSALMTILRNYLKTSIKKSMKNNVRCRVIGERSALSPDIQAAINELEEATAGNT---GLTFTIAINYGSRDEITRAVRKVAKKVKAGDLAPEDITEQMIAENLDTN---FLPDPDLLIRTCNEQRISNYLLWQCAYTEFYYTPVAWPDFNKAELIKAIESYGNRNRKFGGLKKDQ 240
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_015881419.1 (MULTISPECIES: isoprenyl transferase [Exiguobacterium] >ACQ71860.1 undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]) HSP 1 Score: 222.6 bits (566), Expect = 1.800e-54 Identity = 106/245 (43.27%), Postives = 161/245 (65.71%), Query Frame = 0 Query: 62 RTALPPSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRV 307 +T + + VPEH+A+++DGNGRWA++RGLPR GH EG + + ++T Q LGIR++TLY STENW+RP+ E+ ++ + L +L+ H+ +R++V G +LP + V A T T G+ + AL+YGGRD++VQA R++A V +G V ++ID+ + RL TH + + DLV+RTSGEQR SNF+L++ AY+E +E LWP+F++E+ + A+ESY R RRFG V Sbjct: 8 KTKIEAELSVPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEARERTVANT---GLNLVFALNYGGRDELVQAMRSIAVDVQSGSVRADDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_074037225.1 (isoprenyl transferase [Exiguobacterium profundum]) HSP 1 Score: 222.2 bits (565), Expect = 2.300e-54 Identity = 106/245 (43.27%), Postives = 162/245 (66.12%), Query Frame = 0 Query: 62 RTALPPSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRV 307 +T + + VPE++A+++DGNGRWA++RGLPR GH EG + + ++T Q LGIR++TLY STENW+RP+ E+ ++ + L +L+ H+ +R++V G +LP + V A T T G+ + AL+YGGRD++VQA R++A V +G V P++ID+ + RL TH + + DLV+RTSGEQR SNF+L++ AY+E +E LWP+F++E+ + A+ESY R RRFG V Sbjct: 8 KTKIEAELSVPENVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVNEARERTVANT---GLNLVFALNYGGRDELVQAMRSIAGDVQSGLVQPDDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_078146718.1 (isoprenyl transferase [Exiguobacterium sp. HVEsp1]) HSP 1 Score: 221.9 bits (564), Expect = 3.000e-54 Identity = 106/245 (43.27%), Postives = 161/245 (65.71%), Query Frame = 0 Query: 62 RTALPPSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRV 307 +T + + VPEH+A+++DGNGRWA++RGLPR GH EG + + ++T Q LGIR++TLY STENW+RP+ E+ ++ + L +L+ H+ +R++V G +LP + V A T T G+ + AL+YGGRD++VQA R++A V +G V ++ID+ + RL TH + + DLV+RTSGEQR SNF+L++ AY+E +E LWP+F++E+ + A+ESY R RRFG V Sbjct: 8 KTKIEAELSVPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEARERTVANT---GLNLVFALNYGGRDELVQAMRSIAADVQSGLVQTDDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_020584350.1 (di-trans,poly-cis-decaprenylcistransferase [Endozoicomonas elysicola]) HSP 1 Score: 220.7 bits (561), Expect = 6.700e-54 Identity = 112/242 (46.28%), Postives = 158/242 (65.29%), Query Frame = 0 Query: 67 PSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRVTE 309 PS +P H+A++LDGN RWA+++ LP AGH G R +V++ C G+ +TL+ S+ENW+RP E+ ++ N LR KNRIRL VIG++ R +Q + EA+TA ++ +T+ +A +YGG DI A R LA++VA GE+ E+IDE+ E LST L PPDL++RTSGEQR SNF+L++CAYSEF+ +E LWPDF ++ L AL SY RR+RRFG+ +E Sbjct: 65 PSERLPRHVAIILDGNNRWAKRKHLPGLAGHRAGVNRVREVVEACADYGVEVLTLFAFSSENWNRPVVEVNGLMRLFLNVLRREARRLKKNRIRLKVIGEVSRFSSDIQKHIHEVEAQTA---EDYSVTLVIAANYGGMWDIASATRQLAEKVARGELSSEDIDESAIERHLSTSG---LPPPDLLIRTSGEQRISNFLLWQCAYSEFYFTETLWPDFGRDELQQALLSYARRQRRFGKTSE 300
BLAST of NO11G02970 vs. NCBI_GenBank
Match: KEI72081.1 (farnesyl-diphosphate synthase [Endozoicomonas elysicola]) HSP 1 Score: 220.7 bits (561), Expect = 6.700e-54 Identity = 112/242 (46.28%), Postives = 158/242 (65.29%), Query Frame = 0 Query: 67 PSVVVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRVTE 309 PS +P H+A++LDGN RWA+++ LP AGH G R +V++ C G+ +TL+ S+ENW+RP E+ ++ N LR KNRIRL VIG++ R +Q + EA+TA ++ +T+ +A +YGG DI A R LA++VA GE+ E+IDE+ E LST L PPDL++RTSGEQR SNF+L++CAYSEF+ +E LWPDF ++ L AL SY RR+RRFG+ +E Sbjct: 5 PSERLPRHVAIILDGNNRWAKRKHLPGLAGHRAGVNRVREVVEACADYGVEVLTLFAFSSENWNRPVVEVNGLMRLFLNVLRREARRLKKNRIRLKVIGEVSRFSSDIQKHIHEVEAQTA---EDYSVTLVIAANYGGMWDIASATRQLAEKVARGELSSEDIDESAIERHLSTSG---LPPPDLLIRTSGEQRISNFLLWQCAYSEFYFTETLWPDFGRDELQQALLSYARRQRRFGKTSE 240
BLAST of NO11G02970 vs. NCBI_GenBank
Match: WP_015128791.1 (isoprenyl transferase [Calothrix sp. PCC 7507] >AFY32978.1 Undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 7507]) HSP 1 Score: 220.3 bits (560), Expect = 8.800e-54 Identity = 107/245 (43.67%), Postives = 159/245 (64.90%), Query Frame = 0 Query: 65 LPPSV---VVPEHLALVLDGNGRWAQQRGLPRGAGHMEGTQRAFDVLKTCQALGIRTVTLYCLSTENWSRPQAEIIIILGCIENSLRANLEYAHKNRIRLVVIGQMHRLPLSLQALVTRAEAETAGYTQEDGMTVCLALSYGGRDDIVQACRALAKQVATGEVHPEEIDETLFESRLSTHQKGILRPPDLVVRTSGEQRWSNFMLFECAYSEFFVSEALWPDFRQENLLAALESYGRRRRRFGRV 307 LPP + ++P+H+A+++DGNGRWA+++GLPR GH G D+L+ CQ G++ +T Y STENW RPQ E+ ++ + LR L K +++ +G + LP LQA ++R+ ET + G+ +A +YGGR +I+QACRA+A+QV G + P+EIDE LFES L T + PDL++RTSGE R SNF+L++ AY E ++++ALWPDF + AL +Y +R RRFG+V Sbjct: 11 LPPDLKLELLPQHVAVIMDGNGRWAKRQGLPRIMGHKAGVDALKDLLRCCQDWGVQALTAYAFSTENWKRPQEEVDFLMTLFQRVLRQELREMVKENVQIRFVGNLQALPPVLQAEISRSIEET---QENRGIRFTVATNYGGRQEILQACRAIAEQVQQGLLQPDEIDEELFESHLYT---AGIADPDLLIRTSGEMRLSNFLLWQMAYGEIYITDALWPDFNRNEFYRALSAYQQRERRFGKV 249 The following BLAST results are available for this feature:
BLAST of NO11G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02970 ID=NO11G02970|Name=NO11G02970|organism=Nannochloropsis oceanica|type=gene|length=1507bpback to top protein sequence of NO11G02970.1 >NO11G02970.1-protein ID=NO11G02970.1-protein|Name=NO11G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=330bpback to top Synonyms
Publications
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