NO11G02950, NO11G02950 (gene) Nannochloropsis oceanica

Overview
NameNO11G02950
Unique NameNO11G02950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3360
Alignment locationchr11:923891..927250 +

Link to JBrowse

Properties
Property NameValue
DescriptionThioredoxin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:923891..927250 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR036339PUB-like_dom_sf
IPR018997PUB_domain
IPR013766Thioredoxin_domain
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005623cell
Homology
BLAST of NO11G02950 vs. NCBI_GenBank
Match: EWM24912.1 (thioredoxin [Nannochloropsis gaditana])

HSP 1 Score: 638.6 bits (1646), Expect = 3.500e-179
Identity = 529/905 (58.45%), Postives = 590/905 (65.19%), Query Frame = 0
Query:  124 AAATPAIPPGMVCDGDVCYMPGNPSAXXXXXXXXXXXXXXYTDKPHPDYFSVQVHELVGKGHTAQEAEQALHAARYDVAAAAAMLEGN---------------EKGRRTHIEGGEGV--GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKIHIPPAYVDGVNTLIAKGLSQTDALELLTMAKGDLPTAFEILDQDSMARDLDAAVEEMVKEGWDEDVARQALLAQREKSKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVKREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEGGRGTLILKHRNRAPIIAAEQVIGKFLARVRIGGGGRPGGWSGGAGGA-PIFRSKSLRRPAPVKAANANAGSPKTAADGGKKGSSTISVPDASSAVKPKPAXXXXTAPGGMPASKPQMVPRRAFTALSIRLPDGSILKTGLGPTATLDDVFKKVRMDKEKETAKAAVGGLKLVARVPVVRTYLEGGKEGGKKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKE--RKVVSADVLAAKAKAKKEKPRRGGAHTLFSEGHLDEVQTKGNRYYGGGSTYYEASVDEEGEDGREKEKEAGGEIAGEGKSERVE----KGEK 1005
            A + P+ PPGMVCDGDVC++P                   YTDKPH DYFS+QV E V KGHTA EAE+ALH ARYDVA AAA+LEG                E+ +RT       V                   XXXXXXXXXXXXXXXXXXXX   X                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      IPPAYVDGVN LI KGLS+ DALELLT+AKGDLPTA EILDQD+MARDL+AAVEEMV EGWDEDVARQALLAQREK+K+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      DVVFE TE+DLQ +VIESPVPVLLDVYA+WCGPCKQLGPMLE +AVK+GG+FRL KVDSDKNRG+S+ML VQALPSVFAFR+G LVD FVGMP QATLQ FM RLLM S RP VD +KDP+AKT EDL+    K+                                XXXXXXXXXXXXXXXXXXXXXXV+AYLSNL+KHF G    K+R INME+EAFQ+RLG YP AIRILEKVGF DEGG+GTL+L HRNRAP+IAAEQVIG +L+RVR GG               PIFRSKSLRRP                  G  +          SSAV PK      TAP   P S    + R+AFTAL++R+PDGSI K GL   ATL  +   +R ++ KET +  VGGLK+V RVPV+RTY+EGG E GKKLG                             G KE  RKVVSADVLAAKAK KK+KPRRGG HTLFSEGHLDE QTKGNRYYGGGSTY+EA++DEE E G ++     G+  G+GK   VE    KGE+
Sbjct:  132 ANSIPSNPPGMVCDGDVCHLP-----DAKHYAPSPVTAPAYTDKPHADYFSMQVQEFVEKGHTAAEAEKALHEARYDVAVAAAILEGRRPSVGKATSESHTILEREQRTPPTENTAVETSPTDSFRAGPVVGESPPXXXXXXXXXXXXXXXXXXXXXXXXEAPAPLHSLEVSPEAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAIPPAYVDGVNALIGKGLSREDALELLTLAKGDLPTALEILDQDAMARDLEAAVEEMVGEGWDEDVARQALLAQREKTKDLPPPAPVAGTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-HADVVFEVTESDLQKIVIESPVPVLLDVYAEWCGPCKQLGPMLEAMAVKAGGLFRLAKVDSDKNRGISEMLGVQALPSVFAFRDGALVDNFVGMPQQATLQAFMTRLLMRSPRPPVDPLKDPHAKTAEDLE----KMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAYLSNLIKHFSG--DPKYRHINMEREAFQNRLGAYPAAIRILEKVGFNDEGGKGTLVLGHRNRAPVIAAEQVIGGYLSRVRRGGAXXXXXXXXXXXXTMPIFRSKSLRRPXXXXXXXXXXXXXXXXEKGPTQA--------PSSAVSPK-----ATAPS--PPSSNSGLSRKAFTALAVRMPDGSIFKPGLRANATLSKLMAALRAERPKETGQVPVGGLKVVTRVPVLRTYVEGGPESGKKLG-----DLELGGGKVVLTLVVTRPEEGLKEGGKEGKRKVVSADVLAAKAKMKKDKPRRGGTHTLFSEGHLDEAQTKGNRYYGGGSTYFEAAIDEEAEKGEKEGTVTEGKGVGKGKKGGVENRRGKGEE 1004          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: CBN74820.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 196.4 bits (498), Expect = 4.600e-46
Identity = 104/265 (39.25%), Postives = 158/265 (59.62%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFR-DEGGRGTLILKHRNRAPIIAAE 711
            KREDVVFE T+  LQ +V+ESPVPV+LDVYA+WCGPCKQL P LEE A++SGGMFR+ KVD++K R ++++L + A PSVF  ++G ++D FVG   Q  +Q FMM ++MG   P+   +++ + K++ +L+ +  KLAH+AGLA  G+ +KE L   V   + E ++ G                          ++ LM  +   E  K+R+++   +A++  L P+PP +  L   GFR  +G    L L HRN A + + +
Sbjct:  520 KREDVVFEVTDKTLQKVVLESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQRSIAEVLGIHAFPSVFGMKDGIILDNFVGGLAQDEMQSFMMGVVMGMPPPKDQALRE-HQKSQAELRGISRKLAHVAGLAVLGSRKKESLCLKVDKALGETLE-GELPEGGGPAAENAPAVAAAKKAARTVITVLMSAYKFPEDPKYRTLSTTSKAYEEVLAPHPPMLEALRLAGFRHKDGDESHLTLLHRNMAVLASVQ 782          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: OEU21640.1 (hypothetical protein FRACYDRAFT_287510 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 184.1 bits (466), Expect = 2.400e-42
Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMG--SKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEG-----GRGTLILKHRNRAPIIAAEQVIGKFLARVR 722
            KREDV+FE+T A +Q LV+ESPVPVLLD+YADWCGPCK LGP LE++A+KSGGMFRLVK++SD  + VS  L V ALPSV+  R+G++V  F GMP     +D M   +MG     P   LV    ++  E+L     KL   +G ASF  A +EKL   +   ++ ++Q                        +  +LSN++ +      +K+R IN+E +A  S++G     + +L+ VG+   G     G+G  ++   N AP++ A+  I K++ R R
Sbjct:    6 KREDVIFEATTAQIQELVLESPVPVLLDIYADWCGPCKVLGPALEDMAIKSGGMFRLVKINSDNEKPVSQALEVTALPSVYGVRDGKIVHMFQGMPKS---EDMMRNFMMGLFGAAPFSPLVTTEESEKYEELT---NKLIKASGSASFSFAAREKLTDRMIMKLDNLVQ-----------DNTVPDVEGAATLIRTFLSNVVNN---PYDQKYRKINLENKAVASKIGVNSSCLAVLKTVGYSKSGSEMIVGKGKKVI---NVAPLVVAKDCIDKWIQRNR 264          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: OEU21641.1 (hypothetical protein FRACYDRAFT_287510 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 184.1 bits (466), Expect = 2.400e-42
Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMG--SKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEG-----GRGTLILKHRNRAPIIAAEQVIGKFLARVR 722
            KREDV+FE+T A +Q LV+ESPVPVLLD+YADWCGPCK LGP LE++A+KSGGMFRLVK++SD  + VS  L V ALPSV+  R+G++V  F GMP     +D M   +MG     P   LV    ++  E+L     KL   +G ASF  A +EKL   +   ++ ++Q                        +  +LSN++ +      +K+R IN+E +A  S++G     + +L+ VG+   G     G+G  ++   N AP++ A+  I K++ R R
Sbjct:  218 KREDVIFEATTAQIQELVLESPVPVLLDIYADWCGPCKVLGPALEDMAIKSGGMFRLVKINSDNEKPVSQALEVTALPSVYGVRDGKIVHMFQGMPKS---EDMMRNFMMGLFGAAPFSPLVTTEESEKYEELT---NKLIKASGSASFSFAAREKLTDRMIMKLDNLVQ-----------DNTVPDVEGAATLIRTFLSNVVNN---PYDQKYRKINLENKAVASKIGVNSSCLAVLKTVGYSKSGSEMIVGKGKKVI---NVAPLVVAKDCIDKWIQRNR 476          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: OEU21642.1 (hypothetical protein FRACYDRAFT_287510 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 184.1 bits (466), Expect = 2.400e-42
Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMG--SKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEG-----GRGTLILKHRNRAPIIAAEQVIGKFLARVR 722
            KREDV+FE+T A +Q LV+ESPVPVLLD+YADWCGPCK LGP LE++A+KSGGMFRLVK++SD  + VS  L V ALPSV+  R+G++V  F GMP     +D M   +MG     P   LV    ++  E+L     KL   +G ASF  A +EKL   +   ++ ++Q                        +  +LSN++ +      +K+R IN+E +A  S++G     + +L+ VG+   G     G+G  ++   N AP++ A+  I K++ R R
Sbjct:  311 KREDVIFEATTAQIQELVLESPVPVLLDIYADWCGPCKVLGPALEDMAIKSGGMFRLVKINSDNEKPVSQALEVTALPSVYGVRDGKIVHMFQGMPKS---EDMMRNFMMGLFGAAPFSPLVTTEESEKYEELT---NKLIKASGSASFSFAAREKLTDRMIMKLDNLVQ-----------DNTVPDVEGAATLIRTFLSNVVNN---PYDQKYRKINLENKAVASKIGVNSSCLAVLKTVGYSKSGSEMIVGKGKKVI---NVAPLVVAKDCIDKWIQRNR 569          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: XP_002292615.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89811.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 181.4 bits (459), Expect = 1.500e-41
Identity = 103/279 (36.92%), Postives = 153/279 (54.84%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKH-FGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEGGRGTLILKHR---NRAPIIAAEQVIGKFLARVR 722
            K+EDVVFE T  DLQ LVIESPVPVLLDVYADWCGPCKQL P LE++ V +GGM RLVK+++D+ R +S  L V++LP+VF  ++G++++ F GMP     + F+   LMG   P          +  E  K    KL  L+  +SF  + +E+L+  +   ++E+++L                        +  L NLM +       EKFR I ++ +  QS++  YPP + IL+ +GF  +G    ++ K +   N AP   A   I K++ + R
Sbjct:  324 KKEDVVFEGTVEDLQKLVIESPVPVLLDVYADWCGPCKQLTPALEKICVNAGGMLRLVKINTDQQRQISQALEVRSLPTVFGIKDGKVMNMFQGMPRD---EQFVRNFLMGLMVPGQQFNPPLTTEEIEQYKNYSAKLLKLSAASSFSFSARERLQNKIAKDLDELVKL---------IGGEETTGMAVADDSAKILRNLMSNVIRDPFEEKFRKIKLDNKVIQSKVAQYPPCLSILKSIGFTADGESLLVVAKGKKVVNIAPFTVARDCIDKWIDKNR 590          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: GAX19933.1 (hypothetical protein FisN_1Lh596 [Fistulifera solaris])

HSP 1 Score: 172.2 bits (435), Expect = 9.300e-39
Identity = 110/282 (39.01%), Postives = 156/282 (55.32%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGV-SDMLSVQALPSVFAFREGELVDCFVGMP-PQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEG-----GRGTLILKHRNRAPIIAAEQVIGKFLARVR 722
            K+ DV+FE+T + +Q LV+ESPVPVLLDVYADWCGPCK L P+LEE+A+KSGG FRLVKV+SD  R + S  L V ALP+VF    G++   F GMP  Q   Q+FMM LL+  +    D    P  + E D   +  KL   AG ASF    +E+L+  V   +E++IQ                        V + LSN++++       K+R++ +  +   +++G Y  A+ IL+  GF+D G     G G  I+   N AP+I A   I K+++  R
Sbjct:  292 KKSDVIFEATASQIQELVLESPVPVLLDVYADWCGPCKALTPVLEEMAIKSGGAFRLVKVNSDNERSIASGALQVSALPTVFGVSGGKIRHRFQGMPRSQEVFQNFMMGLLVPGQ--AFDPPVTPAEQKEYD--ELSAKLMQAAGGASFSFGSRERLQDRVVARLEDLIQ---------QADGDILEAEGTAQTVRSLLSNVIQN---PLETKYRTVKLTNKLIAAKVGKYKAALSILKSAGFQDNGDVMILGAGKNII---NVAPLICARDCIDKWISEKR 554          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: EJK64417.1 (hypothetical protein THAOC_14848 [Thalassiosira oceanica])

HSP 1 Score: 171.8 bits (434), Expect = 1.200e-38
Identity = 95/283 (33.57%), Postives = 156/283 (55.12%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMP-PQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLK--RMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKH-FGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEGGRGTLILKHRNR----APIIAAEQVIGKFLARVR 722
            +REDV+FE T   +Q LVIESPVPVLLDVYADWCGPCKQL P LE +A+ +GGM RLVK+++D+ R +S  L V+ALP++F  R+G++++ + GMP  +  +++F+M L++  ++       +P    E+D +   + GKL  LA  +SF  + +E+L+  +G L+ E++                          +  L +LM +        KFR +N+  +   +++  +   + IL  +GF+ +G    L++    R    AP +     I K++ R R
Sbjct:  299 RREDVIFEGTTETIQELVIESPVPVLLDVYADWCGPCKQLTPALENIAINAGGMLRLVKINTDEQRQISGALEVKALPTIFGIRDGKILNSWQGMPRDENAVRNFLMGLMVPGQK------FNPPVSAEDDARYNDLSGKLLKLAAASSFSFSARERLQNRIGKLLNELVS----------SIGDEDKGMAIADDSARILRSLMNNVIHNPFDVKFRKVNLGNKVIAAKIARHAACLSILNSIGFKPDGDESALVVAKDKRVVNIAPFVVGRDCIDKWIDRNR 565          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: GAX28613.1 (hypothetical protein FisN_1Hh596 [Fistulifera solaris])

HSP 1 Score: 164.5 bits (415), Expect = 1.900e-36
Identity = 104/282 (36.88%), Postives = 146/282 (51.77%), Query Frame = 0
Query:  447 KREDVVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGV-SDMLSVQALPSVFAFREGELVDCFVGMP-PQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEG-----GRGTLILKHRNRAPIIAAEQVIGKFLARVR 722
            K+ DV+FE+T + +Q LV+ESPVPVLLDVYADWCGPCK L P+LEE+A+KSGG FRLVKV+SD  R + S  L V ALP+VF    G++   F GMP  Q   Q+FMM LL+    P            +++   +  KL   AG ASF    +E+L+  V   + ++IQ                             S L K        K+R++ +  +   +++  Y  A+ IL+  GF+D G     G G  I+   N AP+I A   I K+++  R
Sbjct:  292 KKSDVIFEATASQIQELVLESPVPVLLDVYADWCGPCKALTPVLEEMAIKSGGAFRLVKVNSDNERSIASGALQVSALPTVFGISGGKIRHRFQGMPRSQEVFQNFMMGLLV----PGQAFDPPVTPAEQKEYNELSAKLLQAAGGASFSFGSRERLQDRVVARLGDLIQ------------QADGDILEAEGSAQTVRSLLSKVIQNPMETKYRTVKLTNKVIAAKVSKYKAALSILKSAGFQDNGDVMVLGAGKNII---NVAPLICARDCIDKWISEKR 554          
BLAST of NO11G02950 vs. NCBI_GenBank
Match: CEL91887.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 157.5 bits (397), Expect = 2.400e-34
Identity = 89/267 (33.33%), Postives = 145/267 (54.31%), Query Frame = 0
Query:  458 ADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGMFRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDFMMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEKLERAVGGLVEEVIQLGXXXXXXXXXXXXXXXXXXXXXXVSAYLSNLMKHFGGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDE-----GGRGTLILKHRNRAPIIAAEQVIGKFLAR 720
            ++LQ LVIESPVPVL+DVYADWCGPC+QL P+LE++  + GGMFRLVK++SDK++ +S  L V+ LP++ +  +G++V+   G+     LQ  + RL            + P    +E L+ +  + + + G A+FG A+ EKL+  +   ++++++                        +S YL N+ +H    +  K+R IN+        + PYPPA+ IL  VGF+D      G    +  + RN AP+ AA + +  + A+
Sbjct:  262 SELQRLVIESPVPVLIDVYADWCGPCQQLKPILEDVVTQFGGMFRLVKINSDKHKSLSQCLEVEGLPTLLSVIDGDIVEKSTGVGGSDQLQALITRLAQ----------RQPELSQKEKLQPVSRRFSSMCGRAAFGFAKSEKLDYDIKKQLDQLLK---------APGMTSDKAQETVRILSIYLKNVARH---PQDPKYRRINLLNAKAAETVAPYPPALAILRLVGFQDSADVSAGAPVAMSYESRNLAPVTAAYKTLTAWKAK 506          
The following BLAST results are available for this feature:
BLAST of NO11G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24912.13.500e-17958.45thioredoxin [Nannochloropsis gaditana][more]
CBN74820.14.600e-4639.25conserved unknown protein [Ectocarpus siliculosus][more]
OEU21640.12.400e-4238.65hypothetical protein FRACYDRAFT_287510 [Fragilario... [more]
OEU21641.12.400e-4238.65hypothetical protein FRACYDRAFT_287510 [Fragilario... [more]
OEU21642.12.400e-4238.65hypothetical protein FRACYDRAFT_287510 [Fragilario... [more]
XP_002292615.11.500e-4136.92predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX19933.19.300e-3939.01hypothetical protein FisN_1Lh596 [Fistulifera sola... [more]
EJK64417.11.200e-3833.57hypothetical protein THAOC_14848 [Thalassiosira oc... [more]
GAX28613.11.900e-3636.88hypothetical protein FisN_1Hh596 [Fistulifera sola... [more]
CEL91887.12.400e-3433.33unnamed protein product [Vitrella brassicaformis C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL113nonsL113Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR022ngnoR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001957NSK001957Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02950.1NO11G02950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630872gene_5195Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100092g15gene5579Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02950.1NO11G02950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02950 ID=NO11G02950|Name=NO11G02950|organism=Nannochloropsis oceanica|type=gene|length=3360bp
ATGGCCTCGTCGGCAGCGTCGAGAAGAGTTTGGTTTTTGCCACTGCCTAC
GTCCCTGGTGCTGGTGCTTCTTGTGCTAGCCTCGTGCCAAATGATGGTTC
GAGTAGTGGAAGGAAGGACGTCGTCTTTACAATTGCGCGTATGTGGTGGA
TTTTGCGGACGAAATGGGCCCAATCCCTCTTCTACTACACCGTCTGCTTT
GCTGTGGGGTGTCCGCGGCGGCGCTGCTTCGCCTGACGATGAAGAAGGTG
AGGACGCAGGTGCTGCTGCAGCTTCTGCTGCTGCCGCAGCGGGGAAAGAC
CATCCTCACTCTCAGCACTCCCACGCGCACCATTCGCACGGAGAACACTG
CAACCATGAGAATAACCATGCAGCAGCAACGCCCGCCATCCCTCCTGGGA
TGGTCTGCGACGGCGACGTCTGCTACATGCCCGGCAATCCCAGCGCATCC
GCCACTGCTGCTCCTGCTGCCCCCACTGCTCCTGCTGCTTATACAGACAA
GCCCCACCCTGATTACTTCTCTGTGCAAGTGCATGAATTGGTGGGTAAAG
GACATACTGCTCAGGAGGCTGAGCAGGCTTTGCATGCAGCTCGCTATGAT
GTAGCGGCTGCGGCGGCAATGCTCGAGGGAAATGAGAAAGGTCGACGCAC
TCATATCGAAGGAGGAGAAGGAGTTGGAGGTAGAGGTGGAGGTGGAGTTA
CAGAAGCAGTAACACCTCGATCCTCTCCACCATCTTCTGAAGAACCGCAG
GCACCTGCGGCAACACCACCAAAAGTACCAGCGGCACCTTATTCTTCTCC
TTCCCCGGCCCATGCACCAGCGCCAGCTGCCCCCGCCCCTCCCACAGCCG
CCAGCACGCCTCCTCCTCCTCCACCTCCTCCTCCTCCTGTATTTTCCACC
CCACCTCCTCCGTCTCCCTCCTCGCCTTCTTCCGAAGACGAGACAAAGGC
CGAAAAGATCCACATCCCTCCCGCATACGTCGATGGAGTCAACACCTTAA
TCGCCAAGGGTCTCTCCCAAACCGACGCCCTCGAGCTCCTCACAATGGCC
AAAGGTGACCTCCCCACAGCATTTGAAATTCTTGACCAAGACAGTATGGC
GCGGGACCTCGATGCTGCCGTGGAGGAGATGGTAAAGGAAGGGTGGGATG
AGGACGTGGCCCGACAGGCCCTTTTAGCCCAGCGGGAGAAATCCAAAAAC
ACGCCAGCTGCAGCTGTCACTGTTGCTACTACTACCGCTGCTGCCCCAAC
TCCTACTCCTCCTGCTTCTGCGGCCAAAAAGCCGGCAGCACCAGCGAAAA
AGAAGGCGGGGCCAGCCAAGCCTTCCGTCCTAGCGGTGAAAAGGGAGGAT
GTAGTGTTTGAGAGTACGGAAGCGGACCTCCAGAGTTTGGTTATAGAGTC
CCCTGTGCCTGTTTTGCTTGACGTGTACGCGGATTGGTGTGGACCGTGCA
AGCAATTAGGACCCATGTTGGAGGAGCTGGCCGTTAAATCAGGAGGAATG
TTCCGACTCGTGAAGGTGGACTCGGATAAAAATCGGGGAGTGAGTGACAT
GCTGTCCGTGCAGGCCCTGCCGTCGGTGTTTGCGTTCAGAGAGGGGGAAT
TGGTGGATTGCTTTGTGGGGATGCCGCCCCAGGCGACGCTTCAGGACTTT
ATGATGCGCTTGTTGATGGGCTCGAAGAGGCCAGAGGTTGATTTAGTCAA
GGATCCCAATGCCAAGACAGAGGAAGACTTGAAGAGGATGGGGGGGAAGC
TGGCGCATCTTGCGGGATTGGCCTCGTTCGGTGCCGCGAGGAAGGAAAAG
CTTGAACGGGCTGTGGGAGGACTGGTGGAGGAGGTGATTCAGTTGGGCGA
GGAGGGGGGGGACGGGGGGGAGGAAGGGCGAGGGAGGGAGGGGGCGATGA
GAGCAATAAAGACAGTGAGTGCCTATTTGTCCAACTTGATGAAACATTTT
GGAGGGAAGGAGGGGGAGAAATTCAGAAGTATTAATATGGAAAAAGAAGC
GTTTCAATCACGCCTAGGACCGTACCCGCCCGCGATTCGGATCTTGGAAA
AAGTGGGCTTTCGGGACGAGGGAGGACGAGGGACGTTGATCCTCAAGCAC
AGGAATAGAGCTCCTATCATTGCCGCAGAGCAGGTAATTGGCAAATTTTT
GGCGAGAGTCAGGATAGGAGGCGGGGGAAGGCCGGGGGGGTGGAGTGGAG
GAGCAGGAGGGGCACCGATTTTCAGGAGTAAATCCTTGAGGCGGCCGGCG
CCCGTGAAGGCTGCTAATGCAAATGCTGGATCTCCGAAAACAGCGGCTGA
TGGAGGCAAGAAGGGCAGTAGTACGATCTCTGTTCCTGATGCTTCCTCTG
CTGTCAAGCCAAAACCCGCTGCTGCTGCTGCTACAGCTCCCGGTGGAATG
CCAGCATCCAAACCTCAGATGGTGCCTCGTCGGGCTTTCACTGCTCTCTC
CATTCGCCTGCCGGATGGAAGCATCTTAAAGACAGGTCTTGGACCCACGG
CTACCCTCGATGACGTTTTCAAAAAAGTCCGGATGGACAAGGAAAAAGAA
ACCGCGAAAGCAGCCGTGGGTGGATTAAAACTCGTGGCCCGCGTGCCGGT
GGTAAGGACGTACCTGGAAGGAGGGAAAGAGGGAGGGAAGAAGCTAGGAG
ACCTCGAAATTGGTGGTGGGGAAGTCATTTTGAGTTTGGTAATCGTGTCC
CCGGTAATGGAGGAAGGGAAAGAGGGAGGGAAGGAGGGGAGGAAGGAGAG
GAAGGTGGTGTCGGCGGATGTGCTGGCTGCAAAAGCGAAGGCGAAAAAGG
AGAAGCCAAGGAGAGGAGGCGCACATACTTTGTTTTCAGAGGGACATTTG
GATGAAGTCCAGACGAAAGGAAATAGATACTATGGAGGAGGATCGACTTA
TTACGAAGCTAGTGTGGATGAGGAGGGCGAGGATGGGAGGGAGAAAGAGA
AGGAGGCAGGGGGAGAAATTGCGGGGGAGGGGAAGAGTGAAAGAGTGGAG
AAAGGAGAAAAGGAGGTGAACAAAGAGGTGGAGGTCGTAGCAGAGGAGGA
CGAGGACGAGGATGAAGATAATGATGATGATGATGATGAGGACGAGGACG
AGGACGAGGACGAGGAAGACGACGAGAAAGACGACGAGGACGAGGAAGAC
GACGACGACGAGGACGAGGAGGAGGATGAAAGTGACGATGAGGAAGAGGA
GGAGGAGGAGGAGGAGGAGGACGAGGATGAGGAGGACCAAGAGGAGGACG
ACGACGATGATGAGGATGAGGATGAGGATGACGACGACGACGACGACGAC
GAGGACGACGACGACGCCGACGACGACGAGGAGGAGGACGACGACGACGA
CGACGAATAA
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protein sequence of NO11G02950.1

>NO11G02950.1-protein ID=NO11G02950.1-protein|Name=NO11G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1120bp
MASSAASRRVWFLPLPTSLVLVLLVLASCQMMVRVVEGRTSSLQLRVCGG
FCGRNGPNPSSTTPSALLWGVRGGAASPDDEEGEDAGAAAASAAAAAGKD
HPHSQHSHAHHSHGEHCNHENNHAAATPAIPPGMVCDGDVCYMPGNPSAS
ATAAPAAPTAPAAYTDKPHPDYFSVQVHELVGKGHTAQEAEQALHAARYD
VAAAAAMLEGNEKGRRTHIEGGEGVGGRGGGGVTEAVTPRSSPPSSEEPQ
APAATPPKVPAAPYSSPSPAHAPAPAAPAPPTAASTPPPPPPPPPPVFST
PPPPSPSSPSSEDETKAEKIHIPPAYVDGVNTLIAKGLSQTDALELLTMA
KGDLPTAFEILDQDSMARDLDAAVEEMVKEGWDEDVARQALLAQREKSKN
TPAAAVTVATTTAAAPTPTPPASAAKKPAAPAKKKAGPAKPSVLAVKRED
VVFESTEADLQSLVIESPVPVLLDVYADWCGPCKQLGPMLEELAVKSGGM
FRLVKVDSDKNRGVSDMLSVQALPSVFAFREGELVDCFVGMPPQATLQDF
MMRLLMGSKRPEVDLVKDPNAKTEEDLKRMGGKLAHLAGLASFGAARKEK
LERAVGGLVEEVIQLGEEGGDGGEEGRGREGAMRAIKTVSAYLSNLMKHF
GGKEGEKFRSINMEKEAFQSRLGPYPPAIRILEKVGFRDEGGRGTLILKH
RNRAPIIAAEQVIGKFLARVRIGGGGRPGGWSGGAGGAPIFRSKSLRRPA
PVKAANANAGSPKTAADGGKKGSSTISVPDASSAVKPKPAAAAATAPGGM
PASKPQMVPRRAFTALSIRLPDGSILKTGLGPTATLDDVFKKVRMDKEKE
TAKAAVGGLKLVARVPVVRTYLEGGKEGGKKLGDLEIGGGEVILSLVIVS
PVMEEGKEGGKEGRKERKVVSADVLAAKAKAKKEKPRRGGAHTLFSEGHL
DEVQTKGNRYYGGGSTYYEASVDEEGEDGREKEKEAGGEIAGEGKSERVE
KGEKEVNKEVEVVAEEDEDEDEDNDDDDDEDEDEDEDEEDDEKDDEDEED
DDDEDEEEDESDDEEEEEEEEEEDEDEEDQEEDDDDDEDEDEDDDDDDDD
EDDDDADDDEEEDDDDDDE*
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Synonyms
Publications