NO11G02940, NO11G02940 (gene) Nannochloropsis oceanica

Overview
NameNO11G02940
Unique NameNO11G02940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6623
Alignment locationchr11:923764..930386 -

Link to JBrowse

Properties
Property NameValue
DescriptionAnthranilate phosphoribosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:923764..930386 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO:0016740transferase activity
Homology
BLAST of NO11G02940 vs. NCBI_GenBank
Match: EWM24919.1 (anthranilate phosphoribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 399.1 bits (1024), Expect = 1.600e-107
Identity = 203/354 (57.34%), Postives = 248/354 (70.06%), Query Frame = 0
Query:   46 ILGKPDTYVVVRYGGEEHRTKEVDDCEDPIYEDDWVSTGGMAVNEFVEVSIMEKYTVRDKELGSLRFPADSFAHNILEASWFELERDGEVCGEVCLAARFTPIVCSGMGRSGSNSSSSNRFGVGSVEQAVQYFSGPRPWYMRGGFYYDLSKRVYRRVKHIPLVGLGPSMGECVVEGVLTHIVLRKQPGEMVATESGIARLDHVVTGLITTIDVGIDQTKDQVLKKAVALKKQMT---XXXXXXXXXXXXXXXXXXXXXXXIIWGLVEGTVAHVARPVTSYVPIVGGLGVQILDYIVXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGASPIPTAD--VSAFDKPIRKSKMSASGF 395
            +LGKPDTYVV+RYGG+EHRTKEV+DCEDP+Y+D WVST GMA N+ VE+++MEKY V+D+ELGSL FPADSFAHN+LEASWFELERDGEVCGE+CLAARF PI+ SG+G +G+ S      G G +EQ  QYFSGPRPWYMRGGFYYDLSKRVYRRVKH+P++GLGP++GECVVE VL+ ++     G+     S ++RLDHVV GLI+TID+GIDQTKDQ+L+ A++LKK+MT                          IIW LVEGTV HVA+PV SYVPIVGGLGV++LD+IV                           E   SP+       SAFD P + +  SASG+
Sbjct:    1 MLGKPDTYVVIRYGGDEHRTKEVEDCEDPVYDDMWVSTAGMARNDMVEITVMEKYNVKDEELGSLTFPADSFAHNVLEASWFELERDGEVCGEICLAARFAPILTSGLGGAGNRSGHGAVSGDGPLEQVAQYFSGPRPWYMRGGFYYDLSKRVYRRVKHLPMLGLGPAVGECVVERVLSRVISVPAAGD-APLVSNLSRLDHVVAGLISTIDMGIDQTKDQMLQSALSLKKKMTGKAPSGGALEDREGREPASAAKKNSGIIWSLVEGTVTHVAKPVASYVPIVGGLGVRVLDFIV-----PPPPAAETASVVESLAPAACVGEKSTSPLARKGGYTSAFDAPSKVNAASASGY 348          
The following BLAST results are available for this feature:
BLAST of NO11G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24919.11.600e-10757.34anthranilate phosphoribosyltransferase [Nannochlor... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL113nonsL113Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR022ngnoR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001958NSK001958Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02940.1NO11G02940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100092g13gene5578Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02940.1NO11G02940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02940 ID=NO11G02940|Name=NO11G02940|organism=Nannochloropsis oceanica|type=gene|length=6623bp
CGTGAATTTTTTTGGCTGCCTCGATGATTGAGATTTCTAGCCCAGCGACC
CCATGTAAGGGTACACCCACCCAGGCACCTCGCTCGATGATCATGGCCAG
CTCGATCTCGGGCTCTCGCATGTACCGCTTCATCAAGAGGCCGTACAACG
CCAGCATGGTCGCTTGCTTGCGCCCGAGGTGGTCCTCATTCTTGTAAGGG
ATATCATTAAATTTAACATTTAAGGCATCGGCATCATTGTCATCATGGTA
CTTCAGAAGAGGCAACGTTGAAGCCGAGCGCACAACACCAGGTACATACT
CTTGCTCCTCCACTTTGGCCGCCCGGTCGTAGTCTGTGGGAAGTTTTTCG
CAGGAAATTTGGCAAAGTAGAGTGCCAAAAAAGTCCATGACTGCACCAGA
AATAGGTGTGACCGAATAAATTGGAGGTCTTGAAAGGTGTGGCTCTTGCG
TTTGTGCTGTGGTATGGCGAAGGGGAGGGGCAAGAAATGGGTGTAAAAAT
TAGGATGAGGACTTGGAAGCACATGCCGAGGGACAAGgcaagtagattca
cctctcattaaatcgctcagtcgcatcgtgcgctggatgcccatttcgag
ccgtcacgtttccctcagcacgctgttgctgccgtgtatggggaggtttg
acggcagttgttttgagacgttacgcgcgcccattttgacccatattcga
acgagaggagaggccttggacatccaagactgtgccctatgcacgcctct
taggcttctgtacaatccgagaatatatgtctataagatctatgccttga
ttcatcagtaccacgcctcagtcgtgctaatggccagccgcaagttgtgt
tgtccaattaccatgcaaaacgttcctctccccaagcctcattcgtcatc
tcaacctcgccttcctacacacaacacggtacaacacagGGTGCACGTCT
TATCACGATATTCCAATGGACCCCATTCAGAACAAGGTAGCCGAGCTCTC
CATCGTTACGCGCGGGACACCGATAGCCGACCGCGGCGTCATCCATCCCG
GGATTGTCAATATTCGAGgtaaggaggactaagcaaggaagcttgaatgg
aggacccgcaagacgagtgcgtgagctatttgatggagtgcagaataaga
gcacgattgagagaaggatttggagaggagggcggcagcaaggtggtgaa
acacgcgtgaacaatgcctcgggggtggcgataaaagcaagctgagaatg
gccacaaaggcagcagcaagaacaaatccaagtgcactcagctttttcct
cctatcacacacccctttacaccatacatctagTGTTGGCAGCGAAAGGT
ATCAAATCCCTGGAGATCCTGGGCAAACCCGATACCTACGTGGTGGTGCG
GTACGGCGGCGAGGAGCATAGGACCAAGGAGGTGGACGACTGCGAAGACC
CGATCTACGAGGATGACTGGGTGTCGACCGGGGGTATGGCTGTAAATGAG
TTTGTAGAAGTGTCAATTATGGAGAAGTACACAGTGCGGGACAAGGAGCT
GGGCAGCCTCAGATgtacgtggggtagttcgaacatccgtgtgtgtcttt
gcgtgtgtctattttatacattcgtagatttttcaatttgggactctctt
atatgactctccttcttttgtctacccatccttttctcttatcctatcac
ttcatctccctcatttattcctgtccttcctccccccctcccctaacacc
ccctcctccagTCCCCGCGGACTCATTCGCGCATAATATACTAGAGGCCT
CCTGGTTCGAGCTGGAACGCGATGGCGAGGTGTGTGGGGAAGTGTGCCTT
GCCGCCCGCTTCACCCCTATTGTCTGCAGTGGCATGGGAAGGTCAGGGAG
CAACAGCAGCAGCAGCAACCGCTTTGGGGTCGGATCTGTCGAACAAGCTG
TTCAATATTTTTCGGGGCCGCGACCTTGGTACATGCGTGGCGGCTTTTAC
TATGACCTAAGCAAGCGGGTGTATCGACGTGTGAAGCACATCCCGCTCGT
GGGGTTGGGACCGTCGATGGGGGAGTGTGTCGTGGAAGGGGTGCTCACTC
ACATTGTTTTGCGGAAGCAACCCGGGGAGATGGTGGCGACGGAGAGCGGC
ATTGCACGGCTGGACCACGTCGTGACTGGGCTGATTACGACGATTGATGT
GGGCATCGATCAGACCAAAGACCAGGTCTTGAAGAAGGCGGTGGCATTGA
AGAAACAGATGACTGGGGAGATGGTCGTCGTCGAGCCCCCGGCGCAACAG
CAGCAGAAGCAGCAGATGAAGAAGAGTAGTGGGATCATTTGGGGGCTAGT
GGAAGGGACTGTGGCCCATGTGGCCAGGCCGGTGACAAGCTACGTGCCGA
TTGTGGGAGGGTTGGGAGTACAGATTCTTGATTACATCGTCCCTCCCCCG
CCACCCACCGAGATGAGCTTGGAGGCGAGGATGTCTGCTGCTGCCACTAC
TGCCGCTGATTCTGCTTCGACGGAAGGAGGGGCAAGCCCTATTCCTACAG
CTGATGTATCGGCGTTTGACAAGCCCATAAGGAAGAGCAAAATGTCCGCC
AGCGGATTCTGAGAAAATTTGCCCTTCATCCATCCCTCCCTCCATCCCTC
TCTCCCTCCTTATTCTACCACACCTATAGAGAGGTGTCTCTTCCCTTCCT
CTTTTCTTCTCATATTTTAATACACATCCCTCGTTCGTCATTCACTCAAT
CGGCTGCCTTCCCGCGTGGCGCTCGCCGAAGTACATATACACGATTTTAC
GCACACTTACACACAACAAACAAATTGAGGATAATCAGCAGTAGCTGCAG
GAAGGAGGAGGAAGCAAAGGAAGGAGGGAGGGAAGAAGGTAAATTGGCAG
GAGAAAAGTTAAGCTGAGAGAGAAAGAGAATCAATACTTAAACAGGAAAG
CAAGAAAGTAAAAAGAAAGAAAAAAAGAGAGCCCTGCGACTTTTCATTCG
TTTACACGTGAACAATAATAAAAGCGGGAGGGCTGAATACCCACGCGAAT
TGTTTTCATTTCTTAGCTTCTGTTAGATAGCTGTGATGCTTTGGTACTTT
ATCGGCGTCACACAGACACGAGGTGTGTGCTGGGTTTTATTCGTCGTCGT
CGTCGTCGTCCTCCTCCTCGTCGTCGTCGGCGTCGTCGTCGTCCTCGTCG
TCGTCGTCGTCGTCGTCATCCTCATCCTCATCCTCATCATCGTCGTCGTC
CTCCTCTTGGTCCTCCTCATCCTCGTCCTCCTCCTCCTCCTCCTCCTCCT
CTTCCTCATCGTCACTTTCATCCTCCTCCTCGTCCTCGTCGTCGTCGTCT
TCCTCGTCCTCGTCGTCTTTCTCGTCGTCTTCCTCGTCCTCGTCCTCGTC
CTCGTCCTCATCATCATCATCATCATTATCTTCATCCTCGTCCTCGTCCT
CCTCTGCTACGACCTCCACCTCTTTGTTCACCTCCTTTTCTCCTTTCTCC
ACTCTTTCACTCTTCCCCTCCCCCGCAATTTCTCCCCCTGCCTCCTTCTC
TTTCTCCCTCCCATCCTCGCCCTCCTCATCCACACTAGCTTCGTAATAAG
TCGATCCTCCTCCATAGTATCTATTTCCTTTCGTCTGGACTTCATCCAAA
TGTCCCTCTGAAAACAAAGTATGTGCGCCTCCTCTCCTTGGCTTCTCCTT
TTTCGCCTTCGCTTTTGCAGCCAGCACATCCGCCGACACCACCTTCCTCT
CCTTCCTCCCCTCCTTCCCTCCCTCTTTCCCTTCCTCCATTACCGGGGAC
ACGATTACCAAACTCAAAATGACTTCCCCACCACCAATTTCGAGGTCTCC
TAGCTTCTTCCCTCCCTCTTTCCCTCCTTCCAGGTACGTCCTTACCACCG
GCACGCGGGCCACGAGTTTTAATCCACCCACGGCTGCTTTCGCGGTTTCT
TTTTCCTTGTCCATCCGGACTTTTTTGAAAACGTCATCGAGGGTAGCCGT
GGGTCCAAGACCTGTCTTTAAGATGCTTCCATCCGGCAGGCGAATGGAGA
GAGCAGTGAAAGCCCGACGAGGCACCATCTGAGGTTTGGATGCTGGCATT
CCACCGGGAGCTGTAGCAGCAGCAGCAGCGGGTTTTGGCTTGACAGCAGA
GGAAGCATCAGGAACAGAGATCGTACTACTGCCCTTCTTGCCTCCATCAG
CCGCTGTTTTCGGAGATCCAGCATTTGCATTAGCAGCCTTCACGGGCGCC
GGCCGCCTCAAGGATTTACTCCTGAAAATCGGTGCCCCTCCTGCTCCTCC
ACTCCACCCCCCCGGCCTTCCCCCGCCTCCTATCCTGACTCTCGCCAAAA
ATTTGCCAATTACCTGCTCTGCGGCAATGATAGGAGCTCTATTCCTGTGC
TTGAGGATCAACGTCCCTCGTCCTCCCTCGTCCCGAAAGCCCACTTTTTC
CAAGATCCGAATCGCGGGCGGGTACGGTCCTAGGCGTGATTGAAACGCTT
CTTTTTCCATATTAATACTTCTGAATTTCTCCCCCTCCTTCCCTCCAAAA
TGTTTCATCAAGTTGGACAAATAGGCACTCACTGTCTTTATTGCTCTCAT
CGCCCCCTCCCTCCCTCGCCCTTCCTCCCCCCCGTCCCCCCCCTCCTCGC
CCAACTGAATCACCTCCTCCACCAGTCCTCCCACAGCCCGTTCAAGCTTT
TCCTTCCTCGCGGCACCGAACGAGGCCAATCCCGCAAGATGCGCCAGCTT
CCCCCCCATCCTCTTCAAGTCTTCCTCTGTCTTGGCATTGGGATCCTTGA
CTAAATCAACCTCTGGCCTCTTCGAGCCCATCAACAAGCGCATCATAAAG
TCCTGAAGCGTCGCCTGGGGCGGCATCCCCACAAAGCAATCCACCAATTC
CCCCTCTCTGAACGCAAACACCGACGGCAGGGCCTGCACGGACAGCATGT
CACTCACTCCCCGATTTTTATCCGAGTCCACCTTCACGAGTCGGAACATT
CCTCCTGATTTAACGGCCAGCTCCTCCAACATGGGTCCTAATTGCTTGCA
CGGTCCACACCAATCCGCGTACACGTCAAGCAAAACAGGCACAGGGGACT
CTATAACCAAACTCTGGAGGTCCGCTTCCGTACTCTCAAACACTACATCC
TCCCTTTTCACCGCTAGGACGGAAGGCTTGGCTGGCCCCGCCTTCTTTTT
CGCTGGTGCTGCCGGCTTTTTGGCCGCAGAAGCAGGAGGAGTAGGAGTTG
GGGCAGCAGCGGTAGTAGTAGCAACAGTGACAGCTGCAGCTGGCGTGTTT
TTGGATTTCTCCCGCTGGGCTAAAAGGGCCTGTCGGGCCACGTCCTCATC
CCACCCTTCCTTTACCATCTCCTCCACGGCAGCATCGAGGTCCCGCGCCA
TACTGTCTTGGTCAAGAATTTCAAATGCTGTGGGGAGGTCACCTTTGGCC
ATTGTGAGGAGCTCGAGGGCGTCGGTTTGGGAGAGACCCTTGGCGATTAA
GGTGTTGACTCCATCGACGTATGCGGGAGGGATGTGGATCTTTTCGGCCT
TTGTCTCGTCTTCGGAAGAAGGCGAGGAGGGAGACGGAGGAGGTGGGGTG
GAAAATACAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGCGTGCTGGCGGC
TGTGGGAGGGGCGGGGGCAGCTGGCGCTGGTGCATGGGCCGGGGAAGGAG
AAGAATAAGGTGCCGCTGGTACTTTTGGTGGTGTTGCCGCAGGTGCCTGC
GGTTCTTCAGAAGATGGTGGAGAGGATCGAGGTGTTACTGCTTCTGTAAC
TCCACCTCCACCTCTACCTCCAACTCCTTCTCCTCCTTCGATATGAGTGC
GTCGACCTTTCTCATTTCCCTCGAGCATTGCCGCCGCAGCCGCTACATCA
TAGCGAGCTGCATGCAAAGCCTGCTCAGCCTCCTGAGCAGTATGTCCTTT
ACCCACCAATTCATGCACTTGCACAGAGAAGTAATCAGGGTGGGGCTTGT
CTGTATAAGCAGCAGGAGCAGTGGGGGCAGCAGGAGCAGCAGTGGCGGAT
GCGCTGGGATTGCCGGGCATGTAGCAGACGTCGCCGTCGCAGACCATCCC
AGGAGGGATGGCGGGCGTTGCTGCTGCATGGTTATTCTCATGGTTGCAGT
GTTCTCCGTGCGAATGGTGCGCGTGGGAGTGCTGAGAGTGAGGATGGTCT
TTCCCCGCTGCGGCAGCAGCAGAAGCTGCAGCAGCACCTGCGTCCTCACC
TTCTTCATCGTCAGGCGAAGCAGCGCCGCCGCGGACACCCCACAGCAAAG
CAGACGGTGTAGTAGAAGAGGGATTGGGCCCATTTCGTCCGCAAAATCCA
CCACATACGCGCAATTGTAAAGACGACGTCCTTCCTTCCACTACTCGAAC
CATCATTTGGCACGAGGCTAGCACAAGAAGCACCAGCACCAGGGACGTAG
GCAGTGGCAAAAACCAAACTCTTCTCGACGCTGCCGACGAGGCCATCCTT
GCCGTCTTATCTGGTTATAGTAAGGGCCTGTAATGCGTGTGTCTTGTGTG
TGCACGACCCCTGTGAGTGTGGTGTGTGGAAGGGCACTGCCCTTGGCAAG
TTGAAGGGATGAGAGTCGAGGAG
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protein sequence of NO11G02940.1

>NO11G02940.1-protein ID=NO11G02940.1-protein|Name=NO11G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MDPIQNKVAELSIVTRGTPIADRGVIHPGIVNIRVLAAKGIKSLEILGKP
DTYVVVRYGGEEHRTKEVDDCEDPIYEDDWVSTGGMAVNEFVEVSIMEKY
TVRDKELGSLRFPADSFAHNILEASWFELERDGEVCGEVCLAARFTPIVC
SGMGRSGSNSSSSNRFGVGSVEQAVQYFSGPRPWYMRGGFYYDLSKRVYR
RVKHIPLVGLGPSMGECVVEGVLTHIVLRKQPGEMVATESGIARLDHVVT
GLITTIDVGIDQTKDQVLKKAVALKKQMTGEMVVVEPPAQQQQKQQMKKS
SGIIWGLVEGTVAHVARPVTSYVPIVGGLGVQILDYIVPPPPPTEMSLEA
RMSAAATTAADSASTEGGASPIPTADVSAFDKPIRKSKMSASGF*
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Synonyms
Publications