NO11G02860, NO11G02860 (gene) Nannochloropsis oceanica

Overview
NameNO11G02860
Unique NameNO11G02860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3760
Alignment locationchr11:899517..903276 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:899517..903276 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02860.1NO11G02860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|58032gene_5187Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02860.1NO11G02860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02860 ID=NO11G02860|Name=NO11G02860|organism=Nannochloropsis oceanica|type=gene|length=3760bp
AGCTTTTATTCTCTTCTTTGTTTTTAGACCTTGACACTACACTCTCATTG
TGCTCATTGCCCGGCAAGCATTCCATTTCCTCCATACAGTTTGATTGCCG
TTGTGCAATTGTGCTTGCTTGCCAGGTCACGAAAGTAAGCAAACCACCGC
TGTTGGACGCTAGCAGGCCCATCACTCATCCCCCACATGTCCATCCCAAA
ACACACGACACGACATAGACGACGTTAACATGCGGCAGAACGGGCAATTT
TGGACTGTCAGCTTGCTGCTGGCTGTGATCGCCTTCACGGCTCAACAAGC
TCATGGAGCTTCGTCCAAACAAATCCTCGAGACACCCTTGCCAACACCCA
CACCCACGCCTGAGGTTATCCCTTCCACCAGCGCCCCCGCGACGACCGAC
GCGGAGCCTCTGACCGTCATTGAGCCTCTACCCGAGGCGACTCTCCCTCC
AATCCTCAAGCCCGTCGACGCCGAGGACGATGACCTGGCGCCTGCCGTCG
TTGGGGACGACGGAGAGCCGACCGTGGTGCCCGACCCTTTGCAGCCGGAG
CCGGCGGACAATGCATCTGCTCCCCTATTGGTCGAGCCCACAGTCGAGCC
CACACCCTTCTCGACCATCAACTCAACCGTCAATGCCACATCCCCCTTCT
CCAAAAATGAGGACGATACCGATGACATTGTCGCCGTAGGAGAGGAGGAG
GATGGAATCACAGCAGTGCCGGTGGCCCCCATCCCTACTACTCTGAACAA
GGCCAAGGCTGATGGGCCCACACGCGCACCTACGAATGTCTCTGATTTGC
CCACTGCTGCTGCTGCTGCTGTCGGTGCCGTGGGTGCTGCGCTGAATGCG
TCTGCTTCCGCTGTGGTGAACGGCACGAATGCGCACGCTCCTAATGCATC
GTTGCCTGTCAACGGCTCCCTCCCTTCTGTCGCGTCTGCTGCTGCAGGCG
TGGTCTCGAGCAACGGCAGCTTTCCTTCCCCTCCGAGTGTCAACGTGTCC
GCTGATGGAACAGTTGCTTCAGCGAGCGAGACTTCCCCCGCCGCGAGCGC
CGGCGCCGTGGGTGCTGCACTGAATGCGTCTGCTTCCGCTGTGGTGAACG
GCACGAATGCGCACGCTCCTAATGCATCGTTGCCTGTCAACGGCTCCCTC
CCTTCTGTCGCGTCTGCTGCTGCAGGCGTGGTCTCGAGCAACGGCAGCTT
TCCTTCCCCTCCGAGTGTCAACGTGTCCGCTGATGGAACAGTTGCTTCAG
CGAGCGAGACTTCCCCCGCCGCGAGCGCCGGCGCCGTGGGTGCTGCACTG
AATGCGTCTGCTTCCGCTGTGGTGAACGGCACGAATGCGCACGCTCCTAA
TGCATCGTTGCCTGTCAACAGCTCCCTCCCTTCTGTCGCGTCTGCTGCTG
CAGGCGTGGTCTCGAGCAACGGCAGCTTTCCTTCCCCTCCGAGTGTCAAC
GTGTCCGCTGATGGAACAGTTGCTTCAGCGAGCGAGACTTCCCCCGCCGC
GAGCGCCGGCGCCGTGGGTGCTGCACTGAATGCGTCTGCTTCCGCTGTGG
TGAACGGCACGAATGCGCACGCTCCTAATGCATCGTTGCCTGTCAACAGC
TCCCTCCCTTCTGTCGCGTCTGCTGCTGCAGGCGTGGTCTCGAGCAACGG
CAGCTTTCCTTCCCCTCTGAGTGTCAACGTGTCCGCTGATGGAACAGTTG
CTTCAGCGAGCGAGACTTCCCCGACCGTGAGCGGGAATGCCACGGGTGTG
GTGGTTGAAGGTGGAGCCAATGTAACGGCGGAGTCGGTGATAACTGCAAA
TGGAAACTCGAGCAGTGTCAAACCACCCGTCGTCCCCCCCCCTATCCCAA
ACGCCACACTGCCGGTCTCGAACAACGAGACGGTGCCAGCGCCCAAGCCC
AATGGCACGGCCACCGTTCCTGTGGGGAAGCCTCCGACAGTGGCGGAGTC
CGTGGAGGAGGAGGGGGTGCAGGTGGAGGAAGGGGTATCTTCGATCAACG
CCACTGCTCCTGCCGTGTCTGCAGTCCCTAAACCCACTCCAATGAGCACC
GCTGAGGTTCCCCAAATCCCTACTGAGGTTGCGCCTGCTGTCCTGGCCAC
CCCTGCCCCTATCCTCGAAGAGACTGCTGCTTCAGTCGTCGATGTCAAAC
CCACCTCTCCTTCAGTTCTTCCTGTTGCTACCGATGCACCCGTAGCCGTC
GATCCGTCCCTCCCTCCCGCTCCAGGGACCCCCGCTGCTATTGCTGCTGC
CGCCGCTGAGGCCGCTACGAGCGCACCGGTCGTGATTCCTACCGCCGCAC
CTGTGGCACCTGCAACCCTATCCCCTGCCACCGTCGCTGAAGGCGCCACA
TCCGAGGGATCTCAAGACATCGCCTCCACACCCCTGCCCATACAGCCCCC
GGCTGTCTCGCCTTCCGCAGAAGATCCTAATTCTGCCGGTGAGCTGTCTA
TTCCAACCATCAGCCCCACCCTCCCTCCCGCTCCTCTTATCCCCAGCGTT
GACCCCAGCGAAATCCAAATCGAGCCACCTATGCCTCAGAACGCCGAGGC
CACTCTTCCTCCTGCTTCAACCACTACCACCACCAGCAGCCTCCCCGGAG
GATCTCAAGTCCCTGTAGCCATGGTGCCCGCCGCAGCGCCCGTCGCCGAG
GAGCCCGCTGTACCGGCAGTACCGGAGATGCCTGCGGCCACGCCCGTTCC
ATCCCTCCCTGCCCTCCCTCCCGTCCCTGCTATTCCTGCAGCCGTGGTGC
CCGCCGCAGCGCCCGTCGCCGAGGAGCCCGCTGTACCAGCAGTACCGGAG
ATGCCTGCGGCCACGCCCGTTCCGTCCCTCCCTGCCCTCCCTCCCGTCCC
TGCTATTCCTGCAGCCGTGGTGCCCGCCGCAGCGCCCGTCGCCGAGGAGC
CCGCTGTACCGGCAGTACCGGAGACGCCTGCGGCCACGCCCGTTCCATCC
CTCCCTGCCCTCCCTCCCGTCCCTGCTATTCCTGCAGCCGTGGTGCCCGC
CGCAGCGCCCGTCGCCGAGGAGCCCGCTGTACCGGCAGTACCGGAGATGC
CTGCGGCCACGCCCGTTCCGTCCCTCCCTGCCCTCCCTCCCGTCCCTGCT
ATTCCTGCAGCCGTGGTGCCCGCCGCAGCGCCCGTCGCCGAGGAGCCCGC
TGTACCGGCAGTACCGGAGATGCCTGCGGCCACGCCCGTTCCGTCCCTCC
CTGCCCTCCCTCCCGTCCCTGCTATTCCTGCAGCCGTGGTGCCCGCCGCA
GCGCCCGTCGCCGAGGAGCCCGCTGTACCGGCAGTACCGGAGACGCCTGC
GGCCACGCCCGTTCCATCCCTCCCTGCCCTCCCTCCCGTCCCTGCTATTC
CTGCAGCCGTGGTGCCCACCGCTGTGCCCATTGTTGAGGAGCCCGCTGTA
CCGGAGACCACGGATGTTGTTGACCTTCCTACCCTCCCTCCTTCCGTGGC
CGAGCCAACAAGCCTGCCCACCGCTACACCCTCCCTCCCTGCTTCTCTAT
CTGGCGAGGCTGAAGAGACGGTCGTCCCTACCCCCAATCCAACCCCTCCA
GCGGTCGCTCTTGTCCCTGAGGATGTGATTACGGTAATGCCCACCCTCCC
TCCCTCCCTTGACCTTCCTACAGAACCAGCGGTGGTGCCGGAAGGAAAGG
ATGACAATGATGTGGACCACGGGAAGGCCCCGATAAACGCGACGGCAACG
GCAGCGGGGAAGAAGGGAGGAAAGAAGGGTGGAAACCTCCGGGCGCGCCG
AGGTTTCTAA
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protein sequence of NO11G02860.1

>NO11G02860.1-protein ID=NO11G02860.1-protein|Name=NO11G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1177bp
MRQNGQFWTVSLLLAVIAFTAQQAHGASSKQILETPLPTPTPTPEVIPST
SAPATTDAEPLTVIEPLPEATLPPILKPVDAEDDDLAPAVVGDDGEPTVV
PDPLQPEPADNASAPLLVEPTVEPTPFSTINSTVNATSPFSKNEDDTDDI
VAVGEEEDGITAVPVAPIPTTLNKAKADGPTRAPTNVSDLPTAAAAAVGA
VGAALNASASAVVNGTNAHAPNASLPVNGSLPSVASAAAGVVSSNGSFPS
PPSVNVSADGTVASASETSPAASAGAVGAALNASASAVVNGTNAHAPNAS
LPVNGSLPSVASAAAGVVSSNGSFPSPPSVNVSADGTVASASETSPAASA
GAVGAALNASASAVVNGTNAHAPNASLPVNSSLPSVASAAAGVVSSNGSF
PSPPSVNVSADGTVASASETSPAASAGAVGAALNASASAVVNGTNAHAPN
ASLPVNSSLPSVASAAAGVVSSNGSFPSPLSVNVSADGTVASASETSPTV
SGNATGVVVEGGANVTAESVITANGNSSSVKPPVVPPPIPNATLPVSNNE
TVPAPKPNGTATVPVGKPPTVAESVEEEGVQVEEGVSSINATAPAVSAVP
KPTPMSTAEVPQIPTEVAPAVLATPAPILEETAASVVDVKPTSPSVLPVA
TDAPVAVDPSLPPAPGTPAAIAAAAAEAATSAPVVIPTAAPVAPATLSPA
TVAEGATSEGSQDIASTPLPIQPPAVSPSAEDPNSAGELSIPTISPTLPP
APLIPSVDPSEIQIEPPMPQNAEATLPPASTTTTTSSLPGGSQVPVAMVP
AAAPVAEEPAVPAVPEMPAATPVPSLPALPPVPAIPAAVVPAAAPVAEEP
AVPAVPEMPAATPVPSLPALPPVPAIPAAVVPAAAPVAEEPAVPAVPETP
AATPVPSLPALPPVPAIPAAVVPAAAPVAEEPAVPAVPEMPAATPVPSLP
ALPPVPAIPAAVVPAAAPVAEEPAVPAVPEMPAATPVPSLPALPPVPAIP
AAVVPAAAPVAEEPAVPAVPETPAATPVPSLPALPPVPAIPAAVVPTAVP
IVEEPAVPETTDVVDLPTLPPSVAEPTSLPTATPSLPASLSGEAEETVVP
TPNPTPPAVALVPEDVITVMPTLPPSLDLPTEPAVVPEGKDDNDVDHGKA
PINATATAAGKKGGKKGGNLRARRGF*
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Synonyms
Publications