NO11G02770, NO11G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02770 vs. NCBI_GenBank
Match: EWM24953.1 (hypothetical protein Naga_100148g10 [Nannochloropsis gaditana]) HSP 1 Score: 394.8 bits (1013), Expect = 2.600e-106 Identity = 201/321 (62.62%), Postives = 250/321 (77.88%), Query Frame = 0 Query: 6 ATAPPSTSKAQEEAYD-DDGALTEAGLVRAAIRSSISIYRSILFGSFPRRVPLRSVAKVTDQASTAWETYSFLRGSHKEVVTESK-QLQQKQKEGHGGAVWRKAQVFGHTLRGALPPLIKSGFLGTAVFELYESTKDMMDDAIGFDPDGEAEAATSTWKGTIFLSS---TAVVCGGLAGACHGVMYVGWEHGRQLMDSRYAVTNVWGGTAFAHSLAHASLFGSFEVMKDALLFLTGARHEEPLGVAMVGLAGGLAGLCEEAVSHLTPHWEVEGVGSLKVAIRRHGMPQLRAISAGALPTSLGFLAWEYGRSQVLRQAGENE 322 +T PPS +A D DD TEAG++RAA+RSSI+IYRSILFGSFPRRVPL++V+K+TDQ STAW+ YS +GSHKE + + Q + + KE G A KAQ+FG TLR A+P ++KSGFLGTAVFE+YE++KD +D+A+G D D + EA+ ST + LS T ++ GGLAG CHG++YVGWEH R+L+++++ V NVW GTA AHSLAHASLFGSFEV+KDALL +T ARHEEPLGV +VG AGGLAGL EE VSHLTPHWE EGV SL+ A +R+G+P+LR IS+ ALPTSLGFLAWEYGR +VLR AGE E Sbjct: 81 STVPPS------DATDADDRGCTEAGVIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEE 395
BLAST of NO11G02770 vs. NCBI_GenBank
Match: OQR98734.1 (hypothetical protein THRCLA_06683, partial [Thraustotheca clavata]) HSP 1 Score: 85.9 bits (211), Expect = 2.500e-13 Identity = 73/295 (24.75%), Postives = 133/295 (45.08%), Query Frame = 0 Query: 30 GLVRAAIRSSISIYR--SILFGSFPRRVPLRSVAKVTDQASTAWETYSFLRGSHKEVVTESKQLQQKQKEGHGGAVWRKAQVFGHTLRGALPPLIKSGFLGTAVFELYESTKDMMDDAIGFDPDGEAEAATSTWKGTIFLSSTAVVCGGLAGACHGVMYVGWEHGRQLMDSRYAVTNVWG----GTAFAHSLAHASLFGSFEVMKDALL-FLTGARHEEPLGVAMVG----LAGGLAGLCEEAVSHLTPHWEVEGVGSLKVAIRRHGMPQLRAISAGALPTSLGFLAWEYGRSQV 314 G +R+A+R+ ++ R + + GSFPR VP ++VA +D S + +++ + KE + + K + K A+W +P +++S LG+A + YE T + +I + + +++ GG+AG+ HG + W +L+ S + +G G +H+ H ++F S+E K LL + H E V G ++ ++GL E +SH +E + I+ G P L+ ++ A T LG+LA+EY + V Sbjct: 26 GAMRSALRTLVTKLRLQNPIVGSFPRTVPSKTVASASDNLSFLMDITGYVKEA-KEQLDQQKSPKAKVSTLTKWALWT-----------WVPNIVRSSILGSATWASYEMTTSALQPSI------------APQNMVAYTFGVSLIAGGVAGSLHGSL---WSTSEKLLAS--IKQSAFGYRILGILLSHTSTHIAMFSSYEGTKAMLLDTIVPVEHREDPSVVETGSCILISAAVSGLIGEVMSHYIAPFEQNTMKEALSEIKTLGRPTLQLMAPSAFSTMLGWLAYEYAKDLV 291
BLAST of NO11G02770 vs. NCBI_GenBank
Match: XP_008616076.1 (hypothetical protein SDRG_11800 [Saprolegnia diclina VS20] >EQC30483.1 hypothetical protein SDRG_11800 [Saprolegnia diclina VS20]) HSP 1 Score: 84.0 bits (206), Expect = 9.700e-13 Identity = 80/308 (25.97%), Postives = 137/308 (44.48%), Query Frame = 0 Query: 14 KAQEEAYDDDGALTEAGLVRAAIRSSISIYR--SILFGSFPRRVPLRSVAKVTDQASTAWETYSFLRGSHKEVVTESKQLQQKQKEGHGGAVWRKAQVFGHTLRGALPPLIKSGFLGTAVFELYESTKDMMDDAIGFDPDGEAEAATSTWKGTIFLSSTAVVCGGLAGACHGVMYVGWEHGRQLMDSRYAVTNVWGGTAFAHSLAHASLFGSFEVMKDALL-FLTGARHEEPLGVAMVG----LAGGLAGLCEEAVSH-LTPHWEVEGVGSLKVAIRRHGMPQLRAISAGALPTSLGFLAWEYGRSQV 314 + E + D A+ G +R+ +RS + R + + GSFPR VP+++VA +D S + +++ + KE + + + Q K A+W +P L++S LG+A + YE T + + P + + G A+V GG+AGA HG ++ E + + A G +H+ H ++F S+E K LL + + H+E + G A +GL E V+H + P + S+K A P LR ++ A T LG+LA+E+ + V Sbjct: 9 ETDESSTSSDAAV--GGAMRSGLRSMVMRLRLQNPIVGSFPRTVPVKAVASASDNLSLLMDVTGYVKEA-KEQLDQHRSPQAKVATLTKWAMWT-----------WVPNLVRSSLLGSATWASYELTTNAL------TPSQTPQNVVACTFG------VALVAGGVAGALHGSLWTATEE-LLVRIKQTASGYSLRGVLLSHTTTHVAMFSSYEATKATLLESVVPSEHKEDRSAVVTGACIVAAAATSGLVGEVVTHYIAPFEQAPFRASVKEAAAL-ARPTLRGMAPSAFSTLLGWLAYEFAKDMV 288
BLAST of NO11G02770 vs. NCBI_GenBank
Match: OQR97899.1 (hypothetical protein ACHHYP_09678 [Achlya hypogyna]) HSP 1 Score: 84.0 bits (206), Expect = 9.700e-13 Identity = 79/309 (25.57%), Postives = 134/309 (43.37%), Query Frame = 0 Query: 18 EAYDDDGALTEA---GLVRAAIRSSISIYR--SILFGSFPRRVPLRSVAKVTDQASTAWETYSFLRGSHKEVVTESKQLQQKQKEGHGGAVWRKAQVFGHTLRGALPPLIKSGFLGTAVFELYESTKDMMDDAIGFDPDGEAEAATSTWKGTIFLSSTAVVCGGLAGACHGVMYVGWEHGRQLMDSRYAVTNV---WGGTAFAHSLAHASLFGSFEVMKDALL-FLTGARHEEPLGVAMVG----LAGGLAGLCEEAVSHLTPHWEVEGVGSLKVAIRRHGMPQLRAISAGALPTSLGFLAWEYGRSQV 314 E DD + ++A G +R+A+RS + R + + GSFPR VP+++VA +D S + +++ + KE + + + + K AVW +P +++S LG+A + YE P T+ A+V GG+AG+ HG ++ EH + SR T+ G +H+ H ++F ++E K LL F+ H+E + G A +GL E V+H +E V P LR ++ A T LG+LA+E+ + + Sbjct: 6 EIDDDSNSSSDAAVGGAMRSALRSLVMRIRLQNPIVGSFPRTVPVKAVASASDNLSFLMDVSGYVKEA-KEQLDQHRSPRAKVSSLTKWAVWT-----------WVPNILRSSLLGSATWASYEMA------TTALLPQEPQHVIAYTF-------GVALVAGGVAGSLHGSLWSASEH----LISRLKQTSYGYHLPGVLLSHTTTHMAMFSAYEGTKATLLEFIVPVEHKEDRSEVVTGTCIVAAAATSGLVGEVVTHYIAPFEQVRVKDALAEAAALARPSLRGMAPSAFSTMLGWLAYEFAKDLI 285
BLAST of NO11G02770 vs. NCBI_GenBank
Match: XP_012206661.1 (hypothetical protein SPRG_12283 [Saprolegnia parasitica CBS 223.65] >KDO22654.1 hypothetical protein SPRG_12283 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.8 bits (203), Expect = 2.200e-12 Identity = 77/294 (26.19%), Postives = 133/294 (45.24%), Query Frame = 0 Query: 30 GLVRAAIRSSISIYR--SILFGSFPRRVPLRSVAKVTDQASTAWETYSFLRGSHKEVVTESKQLQQKQKEGHGGAVWRKAQVFGHTLRGALPPLIKSGFLGTAVFELYESTKDMMDDAIGFDPDGEAEAATSTWKGTIFLSSTAVVCGGLAGACHGVMYVGWEHGRQLMDSRYAVTNVWG--GTAFAHSLAHASLFGSFEVMKDALL-FLTGARHEEPLGVAMVG----LAGGLAGLCEEAVSH-LTPHWEVEGVGSLKVAIRRHGMPQLRAISAGALPTSLGFLAWEYGRSQV 314 G +R+ +RS + R + + GSFPR VP+++VA +D S + +++ + KE + + + Q K A+W +P L++S LG+A + YE + + + P + + G A+V GG+AGA HG ++ E LM + T+ + G +H+ H ++F ++E K LL + + H+E + G A +GL E +H + P + SLK A P LR ++ A T LG+LA+E+ + V Sbjct: 16 GAMRSGLRSMVMRLRLQNPIVGSFPRTVPVKAVASASDNLSLLMDVTGYVKEA-KEQLDQHRSPQAKVATLTKWAMWT-----------WVPNLVRSSLLGSATWASYELSTNAL------TPSQTPQNVVACTFG------VALVAGGVAGALHGSLWTATE--ELLMRIKQTATSGYNLRGVLLSHTTTHVAMFSTYEGTKATLLESVVPSEHKEDRSAVVTGACIVAAAATSGLVGEVATHYIAPFEQAPFNESLKEAAAL-ARPTLRGMAPSAFSTLLGWLAYEFAKDMV 282 The following BLAST results are available for this feature:
BLAST of NO11G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02770 ID=NO11G02770|Name=NO11G02770|organism=Nannochloropsis oceanica|type=gene|length=975bpback to top protein sequence of NO11G02770.1 >NO11G02770.1-protein ID=NO11G02770.1-protein|Name=NO11G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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