NO11G02760, NO11G02760 (gene) Nannochloropsis oceanica

Overview
NameNO11G02760
Unique NameNO11G02760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1998
Alignment locationchr11:867845..869842 -

Link to JBrowse

Properties
Property NameValue
DescriptionCitrate/oxoglutarate carrier protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:867845..869842 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO11G02760 vs. NCBI_GenBank
Match: EWM24958.1 (putative mitochondrial carrier family protein yhm2 [Nannochloropsis gaditana])

HSP 1 Score: 500.0 bits (1286), Expect = 6.500e-138
Identity = 265/353 (75.07%), Postives = 298/353 (84.42%), Query Frame = 0
Query:   20 QSQHQQQHFSPTEQVSSMVIGTRSLCTPLVLLPLPSLLALSPAA--APSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTKQGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYEKIYGCPTPQPAK 371
            Q + Q +     +QVS+      +     + +P P LLALS  A  AP S  QEST +KFLVSGTVAWIYEF IGHFLEF KVLKQTK G+Y QLV+GI+ EKG+ GVWDGFFPWGSIQAIAKGAVFGGAHALALG V P+VE G LSPL+A+T+AGGI GGFQG+VLSPTLLLKTRVMTDPIFR++MS+WETSKQSARVG  VIQKEGL ALMKGSLTFSLKRVADWGTRFYFAV+SED  F++GDA++VL+N EKLAASLIGG LS+ LTLPLDVMVAQIQQASKAG++VSVL TFQ+EF+QGGWERVAGFATKGF+ARTLHVALTTALMKTLTSVVYE +YG P P  AK
Sbjct:   20 QIELQSKERRACKQVSNQNTQGLAFRASHLTVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYGAP-PSSAK 371          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: GAX98226.1 (Hypothetical protein PINS_006105 [Pythium insidiosum])

HSP 1 Score: 345.5 bits (885), Expect = 2.000e-91
Identity = 188/317 (59.31%), Postives = 232/317 (73.19%), Query Frame = 0
Query:   50 LLPLPSL-------LALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            L P P+L       LALS  A  S    E    K ++   V  +YEF++GHFLEF K++KQT+   SY  L + I+  KG+VG+WDGFFPWG+IQ +AKGAVF   HAL    + P V+ G+L   VAE +AGG+ GGFQG VLSPTLLLKTRVMTDPIFR++M+  ET+ +S +VG KVIQ EG+AALMKGS+ FS+KRVADW TRF+F+V SE+  FK+GD    LSN EK+AASL+GG  S+  TLP+DVMVAQIQQASKAG +VSVL TFQ+EFK+GG ++VAGFAT GFV R  HV  TT +MKT TS+VYE
Sbjct:   16 LAPAPALAKYQYHPLALSAQATKS----ERPGVKLVIGAGVTVVYEFALGHFLEFIKIMKQTRPTESYATLAREIVHSKGIVGIWDGFFPWGAIQGVAKGAVFAWGHALTKQTLQPFVDDGKLRRNVAEVIAGGMGGGFQGFVLSPTLLLKTRVMTDPIFRQKMTPAETTLKSFQVGMKVIQNEGIAALMKGSIVFSMKRVADWSTRFFFSVQSEEIFFKRGDPNKKLSNGEKMAASLLGGVGSTFCTLPIDVMVAQIQQASKAGAKVSVLETFQSEFKRGGIKQVAGFATTGFVPRLAHVCFTTMIMKTATSIVYE 328          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: XP_008862209.1 (hypothetical protein H310_00990 [Aphanomyces invadans] >ETW08404.1 hypothetical protein H310_00990 [Aphanomyces invadans])

HSP 1 Score: 342.0 bits (876), Expect = 2.300e-90
Identity = 180/313 (57.51%), Postives = 228/313 (72.84%), Query Frame = 0
Query:   46 TPLVLLPLPSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVY 358
            TP VLL      A++P A P    Q     KF +   V W YEF+ GHFLEF KV+KQT+   SYL+L + I R KG+VG+WDGFFPWG++QA+AKG+VF    A +   ++PLV++G LS  +AE M+GG+ GG QG+VLSPTLLLKTRVMTDP+FR +MS WET  +S +VG  VI+ EG+ ALMKGS+ FSLKRVADW TR++F V+SED ++++GD T  ++  E+LAASL+GG LS L TLP+DVMVAQIQQASKAG  V ++ TF+ EF QGG +R+ GFA  GFV R LHVA TT +MKT  S VY
Sbjct:    5 TPPVLL----TTAVAPPALPGKKMQNPQV-KFFIGAGVGWTYEFAAGHFLEFIKVMKQTQSHKSYLELARDITRSKGIVGIWDGFFPWGTVQALAKGSVFSWGQAFSRAQLSPLVKQGYLSDRMAEIMSGGLGGGIQGIVLSPTLLLKTRVMTDPVFRTKMSGWETITKSGQVGMNVIRNEGVPALMKGSVVFSLKRVADWSTRYFFCVLSEDVMYRRGDPTRKITVSEELAASLVGGTLSCLATLPVDVMVAQIQQASKAGANVGIVDTFKNEFAQGGVKRLVGFAMGGFVPRCLHVAFTTMVMKTGCSAVY 312          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: XP_009822048.1 (hypothetical protein H257_00847 [Aphanomyces astaci] >ETV89648.1 hypothetical protein H257_00847 [Aphanomyces astaci])

HSP 1 Score: 339.3 bits (869), Expect = 1.500e-89
Identity = 171/310 (55.16%), Postives = 230/310 (74.19%), Query Frame = 0
Query:   51 LPLPSLLALSPAAAPSSP--QQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVY 358
            + + S + L+ A  P++P  + ++   KF +   V W YEF+ GHFLEF KV+KQT+   SYL+L + I R KG++G+WDGFFPWG++QA+AKG+VF    A +   ++PLV++G +S   AE M+GG+ GG QG+VLSPTLLLKTRVMTDP+FR +MS WET  +S +VG  VI+ EG+ ALMKGS+ FSLKRVADW TR++F V+SEDY++++GD    ++  E+LAASL+GG LS L TLP+DVMVAQIQQASKAG  V ++ATF+ E+ +GG +R+ GF+  GFV R LHVA TT +MKT  S VY
Sbjct:    1 MAMSSPVFLTTAGVPAAPVKKMQNPQVKFFIGAGVGWTYEFATGHFLEFIKVMKQTQSHKSYLELTRDITRAKGIIGIWDGFFPWGTVQALAKGSVFSWGQAFSRAQLSPLVKQGHISDRTAEIMSGGLGGGVQGIVLSPTLLLKTRVMTDPVFRTKMSGWETIVKSGKVGMNVIRNEGVPALMKGSMVFSLKRVADWSTRYFFCVVSEDYMYRQGDPNRKITVSEELAASLVGGTLSCLATLPVDVMVAQIQQASKAGANVGIVATFKDEYAKGGMKRLVGFSMGGFVPRCLHVAFTTMVMKTGCSAVY 310          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: OQR94903.1 (Mitochondrial Carrier (MC) Family [Achlya hypogyna])

HSP 1 Score: 333.6 bits (854), Expect = 8.000e-88
Identity = 173/308 (56.17%), Postives = 225/308 (73.05%), Query Frame = 0
Query:   52 PLPSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            PLP L A  P A    PQ  +   KF++   VAW YE ++GHF EF KV+KQT+   SYLQL + I + KG++G+WDGFFPWG++QA+AKG+VF    A A   + PLV++G LS   AE ++GG  GG QG+ LSPTLLLKTRVMTDP+FR +MS WET K+S +VG  VI+ EG+AALMKGS+ FSLKRVADW TR++F V++E+ LFK+ D    L+  E+LA+SLIGG LS + TLP+DVMVAQIQQASKAG  V +++TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:    8 PLP-LAAPKPVAMGKKPQNPTA--KFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLQLGREITKSKGIIGIWDGFFPWGTVQAVAKGSVFSWGQAFARMQMMPLVKQGHLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMSGWETCKKSGQVGMNVIRNEGIAALMKGSVVFSLKRVADWSTRYFFCVLTEEALFKREDPNKKLTVGEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 312          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: OQS02854.1 (Mitochondrial Carrier (MC) Family [Thraustotheca clavata])

HSP 1 Score: 329.3 bits (843), Expect = 1.500e-86
Identity = 174/321 (54.21%), Postives = 230/321 (71.65%), Query Frame = 0
Query:   39 IGTRSLCTPLVLLPLPSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            + T+SL  PLV  P+ +    +P A            KF++   V W YE ++GHF EF KV+KQT+   SYL+L + I + KG+VGVWDGFFPWG++QA+AKG+VF    A A   + P V++G L    AE ++GG  GG QG+ LSPTLLLKTRVMTDP+FR +M+ WET K+S +VG  VI+ EG+AALMKGS+ FSLKRVADW TR++F V++ED LFK+ + T  L+ +E+L+ASLIGG LS L+TLP+DVMVAQIQQASKAG  V +++TF+ E+ +GG +R+AGF+  GFV R LH A TT +MKT  SVVY+
Sbjct:    1 MSTQSL--PLVATPVITKKPQNPTA------------KFVIGAGVCWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIVGVWDGFFPWGTVQALAKGSVFSWGQAFARVQMVPFVKQGYLGDRTAEVISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRNEGIAALMKGSIVFSLKRVADWSTRYFFCVVTEDALFKRNNPTKKLTVYEELSASLIGGTLSCLVTLPVDVMVAQIQQASKAGANVGIISTFKEEYAKGGLKRIAGFSMAGFVPRCLHCAFTTMVMKTGCSVVYD 307          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: XP_012209040.1 (hypothetical protein SPRG_14473 [Saprolegnia parasitica CBS 223.65] >KDO20227.1 hypothetical protein SPRG_14473 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 326.2 bits (835), Expect = 1.300e-85
Identity = 169/306 (55.23%), Postives = 221/306 (72.22%), Query Frame = 0
Query:   54 PSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            P+L A  P  A   PQ  +   KF++   VAW YE ++GHF EF KV+KQT+   SYL+L + I + KG+ G+WDGFFPWG++QAIAKG+VF    A A   + PLV++G LS   AE ++GG  GG QG+ LSPTLLLKTRVMTDP+FR +M+ WET K+S +VG  VI+ EG++ALMKGS+ FSLKRVADW TR+ F V++E+ LFK  D    L+  E+LA+SLIGG LS + TLP+DVMVAQIQQASKAG  V +++TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:    7 PTLTAPKPLVAGKKPQNPTA--KFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIYGIWDGFFPWGTVQAIAKGSVFSWGQAFARMQMVPLVKQGTLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRHEGISALMKGSIVFSLKRVADWSTRYAFCVLTEEALFKGDDPKKKLTVTEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 310          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: CCA15915.1 (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14])

HSP 1 Score: 325.9 bits (834), Expect = 1.700e-85
Identity = 161/284 (56.69%), Postives = 211/284 (74.30%), Query Frame = 0
Query:   76 KFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            K ++   V   +EF++GHF EF K++KQT    SY QL++ I+  KG++G+WDGF PWG+IQ+IAKG+VF   HA+    + P  E G +S    E +AGG  GGFQG+VLSPTLLLKTRVMTDPIFR RM+  ET K+S  +G KVIQ EG+ ALMKGS  FS+KRVADW TRF+F+V+ E+YL+K+ D    L+N +K+ ASL+GG LSS+ T+P+DVMVAQIQQASKAG +VS++ T + + +QGG  +VAGFAT G + R  HV+LTT +MKT TS+VYE
Sbjct:   77 KLVIGAGVTLAFEFAVGHFFEFIKIMKQTNPHRSYAQLMKDIIHSKGILGIWDGFVPWGAIQSIAKGSVFSWGHAVTKKTLIPYAEDGRISIQAIEIIAGGAGGGFQGLVLSPTLLLKTRVMTDPIFRNRMTALETCKKSLSIGMKVIQNEGIGALMKGSAVFSMKRVADWSTRFFFSVMCEEYLYKRDDPNRKLTNGQKVTASLLGGVLSSISTIPIDVMVAQIQQASKAGTRVSIIETMREQIRQGGIRQVAGFATSGLMVRVAHVSLTTVIMKTATSIVYE 360          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: OWZ08622.1 (Mitochondrial Carrier (MC) protein [Phytophthora megakarya])

HSP 1 Score: 325.9 bits (834), Expect = 1.700e-85
Identity = 172/312 (55.13%), Postives = 223/312 (71.47%), Query Frame = 0
Query:   57 LALSPAAAP-----SSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYEKIYG 363
            LALS    P         +E    K +V   V   YEF++GH+LEF K++KQTK Q SYL L + IM  KG+VG+WDGFFPWG+IQ +AKG+VF   H++A   + PLV   +LS   +E +AGGI GGFQG VLSPTLLLKTRVMTDPIFRE M+  ET  +S R+G KVI KEG+AALMKGS  FSLKRVADW TRF+F+V +E+ ++K+ D   VL+  E++ ASL+GG +S+ +TLP+DV+VAQIQQASKAG++VSV   F+ +++ GG  +V  F T GFVAR +H + TT +MKT TSVVY+ + G
Sbjct:   27 LALSAYRGPLAHSAKKEHKEKAGVKLVVGAGVCLTYEFALGHYLEFIKIMKQTKPQFSYLYLTKEIMHSKGLVGIWDGFFPWGAIQGVAKGSVFAWGHSIARTTLTPLVNSDKLSKGTSEVIAGGIGGGFQGFVLSPTLLLKTRVMTDPIFREHMTPLETMSRSMRIGVKVIHKEGVAALMKGSGMFSLKRVADWSTRFFFSVQAENLVYKRNDPDRVLTTSEQVIASLLGGVVSAAVTLPMDVLVAQIQQASKAGEKVSVAELFRQQYRAGGVNQVLAFGTTGFVARLVHASFTTMIMKTATSVVYDMVEG 338          
BLAST of NO11G02760 vs. NCBI_GenBank
Match: XP_008611023.1 (hypothetical protein SDRG_06986 [Saprolegnia diclina VS20] >EQC35706.1 hypothetical protein SDRG_06986 [Saprolegnia diclina VS20])

HSP 1 Score: 325.1 bits (832), Expect = 2.800e-85
Identity = 169/306 (55.23%), Postives = 220/306 (71.90%), Query Frame = 0
Query:   54 PSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKVLKQTK-QGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHALALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPIFRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFYFAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQQASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMKTLTSVVYE 359
            P L A  P A    PQ  +   KF++   VAW YE ++GHF EF KV+KQT+   SYL+L + I + KG+ G+WDGFFPWG++QAIAKG+VF    A A   + PLV++G LS   AE ++GG  GG QG+ LSPTLLLKTRVMTDP+FR +M+ WET K+S +VG  VI+ EG++ALMKGS+ FSLKRVADW TR+ F V++E+ LFK  D    L+  E+LA+SLIGG LS + TLP+DVMVAQIQQASKAG  V +++TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:    7 PVLTAPKPLAVGKKPQNPTA--KFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIYGIWDGFFPWGTVQAIAKGSVFSWGQAFARMQMVPLVKQGTLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRHEGISALMKGSIVFSLKRVADWSTRYAFCVLTEEALFKGDDPKKKLTVTEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 310          
The following BLAST results are available for this feature:
BLAST of NO11G02760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24958.16.500e-13875.07putative mitochondrial carrier family protein yhm2... [more]
GAX98226.12.000e-9159.31Hypothetical protein PINS_006105 [Pythium insidios... [more]
XP_008862209.12.300e-9057.51hypothetical protein H310_00990 [Aphanomyces invad... [more]
XP_009822048.11.500e-8955.16hypothetical protein H257_00847 [Aphanomyces astac... [more]
OQR94903.18.000e-8856.17Mitochondrial Carrier (MC) Family [Achlya hypogyna... [more]
OQS02854.11.500e-8654.21Mitochondrial Carrier (MC) Family [Thraustotheca c... [more]
XP_012209040.11.300e-8555.23hypothetical protein SPRG_14473 [Saprolegnia paras... [more]
CCA15915.11.700e-8556.69Mitochondrial Carrier (MC) Family putative [Albugo... [more]
OWZ08622.11.700e-8555.13Mitochondrial Carrier (MC) protein [Phytophthora m... [more]
XP_008611023.12.800e-8555.23hypothetical protein SDRG_06986 [Saprolegnia dicli... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001997NSK001997Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02760.1NO11G02760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591638gene_5176Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100148g11gene5537Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02760.1NO11G02760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02760 ID=NO11G02760|Name=NO11G02760|organism=Nannochloropsis oceanica|type=gene|length=1998bp
ATGCTTCCCAACATCGTCCACCTCCTAGCCCAGCCGGCTGATATGCCTTT
CTCGTCGCAGTCGCAGCATCAGCAGCAGCACTTCAGgtacgtagcctcac
cctggcgagcgctcagatgaggctcatagacactatctctaacgtccttt
ttgtacccccatgcagCCCGACCGAGCAAGTATCCAGCATGGTAATTGGG
ACCCGCAGCCTCTGTACACCACTGGTGCTGCTGCCGTTGCCCTCCCTGCT
CGCCCTCAGCCCGGCCGCTGCTCCGTCGTCGCCGCAACAGGAGAGTACAT
TTAGAAAGgtgagcaaacaaaacaattttatttgacacacaaactgtaaa
gtatattcatgttcgcatgtgagctgagagttaaagaggtagcctttcaa
acctgcttgcagaccttgtcggtgatgcaaggcgcgtcttcacacctctt
ccttccacctcaacataccgcttagtctgaacactctatcaacgaccaac
gatcaattcaagcaatttgaaacacgcttctccaaaccccccacaatccc
atcaacaggaccttacacttacagaaactctcatcttcagtctatctttt
taaccctcctcctgcttctcgccccccttgcccccttccttcctcccccc
cttgtcctagTTCCTCGTCAGTGGCACCGTGGCCTGGATATACGAATTCA
GTATCGGCCACTTCCTTGAATTCACAAAAGTCTTGAAACAAACCAAGCAA
GGCTCGTACCTGCAGCTGGTCCAGGGGATCATGCGCGAGAAGGGCGTGGT
TGGTGTGTGGGACGGGTTCTTTCCTTGGGGCTCCATTCAGGCGATTGCCA
AAGgtacgtgtgtaggtgtgtatgtacgtatgtagatgtgcatgcaagga
ggactagggggatgggattttgcatcatgtgaaagcgaaaaggtgggcaa
taatgtcttcccctgcctgccgatttggttccactcctccctccctccct
ccctccctccctccctccctctttccctcatccagGCGCGGTATTTGGAG
GGGCGCATGCCTTGGCCTTAGGGCCGGTGGCGCCTTTGGTGGAGCGAGGA
GAACTGAGCCCCTTGGTGGCTGAGACGATGGCGGGCGGCATCGCTGGAGG
GTTTCAGGGGATGGTGCTCAGCCCAACGTTATTGCTTAAGgtatgtgttt
gatggtcctgtctcaaactatcatgtctggtcgttggcaatcacgtccag
tccggtcctttctccctctctccctcccctcttccctccctttcttcccc
ctctctcaccagACCCGGGTCATGACCGATCCGATCTTTCGCGAACGCAT
GAGCATGTGGGAGACCAGCAAGCAATCCGCCCGCGTGGGCTTCAAGGTCA
TCCAGAAGGAAGGTTTGGCAGCGTTGATGAAGGGGAGCCTGACCTTCTCT
CTGAAGCGCGTTGCGGACTGGGGGACTCGGTTTTATTTCGCCGTAATTTC
CGAAGATTACCTCTTCAAGAAGGGGGATGCGACCTATGTGTTGTCGAATC
ACGAGAAGCTGGCGGCGTCTCTGATTGGCGGGGGCCTGTCCTCTCTCTTG
ACTCTCCCACTCGATGTGATGGTAGCCCAGATCCAGCAGGCGAGCAAGGC
CGGGCAGCAGGTGTCGGTGCTGGCGACCTTTCAGGCAGAGTTTAAGCAGG
GAGGGTGGGAGCGAGTGGCCGGATTTGCGACTAAGGGTTTCGTGGCCCGC
ACGCTGCACGTGGCCTTGACGACTGgtgaggaggagaaggagggagggag
ggaggctagaagggaggggaagattgattcaaataggagtcaccgcgaaa
acattctactcaattctccctccctccctccctcccgcccgccctccctc
ccgccctccctcccgccttagCCTTGATGAAGACGTTGACGTCTGTAGTG
TACGAAAAAATCTACGGGTGTCCAACTCCCCAGCCCGCGAAGTCGTAA
back to top

protein sequence of NO11G02760.1

>NO11G02760.1-protein ID=NO11G02760.1-protein|Name=NO11G02760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MLPNIVHLLAQPADMPFSSQSQHQQQHFSPTEQVSSMVIGTRSLCTPLVL
LPLPSLLALSPAAAPSSPQQESTFRKFLVSGTVAWIYEFSIGHFLEFTKV
LKQTKQGSYLQLVQGIMREKGVVGVWDGFFPWGSIQAIAKGAVFGGAHAL
ALGPVAPLVERGELSPLVAETMAGGIAGGFQGMVLSPTLLLKTRVMTDPI
FRERMSMWETSKQSARVGFKVIQKEGLAALMKGSLTFSLKRVADWGTRFY
FAVISEDYLFKKGDATYVLSNHEKLAASLIGGGLSSLLTLPLDVMVAQIQ
QASKAGQQVSVLATFQAEFKQGGWERVAGFATKGFVARTLHVALTTALMK
TLTSVVYEKIYGCPTPQPAKS*
back to top
Synonyms
Publications