NO11G02740, NO11G02740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02740 vs. NCBI_GenBank
Match: EWM24965.1 (ribonuclease h [Nannochloropsis gaditana]) HSP 1 Score: 371.3 bits (952), Expect = 7.700e-99 Identity = 213/478 (44.56%), Postives = 267/478 (55.86%), Query Frame = 0 Query: 144 YQPESPFQDQPPAYSHLVFPGGDAKAASMAFHHIDSNALHVLRIRLEAREPSSTSPPSPSSRPLLVAEGDITKEGDTIERPTMXXXXXXXXXXXXXXXXPRKEHPKPLKVWCTRAWIGNGPGQREATYGVLAEGLAAAYALGLKNMQVCVPSAQMAREICGVTPLNETSSXXXXXXXXGKAGLQAAHQKIQSSIRHFPSFSVWYDHPVDLAEGEGAGEGGWVEPVPELRGNHEDWDHVLPHLPSITLTPTATVSPYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDPKAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMNPVADALANQALDEEKSGTFGAHGLRID 622 YQP SPF DQPPAYSHLVFPGGD+KAAS A H +S HVLR+RL +PSS P S + PLL AEG+I E P KP WCT+ W+G G G+REA YG++A+G+AAA ALGLKN+QV PSAQ+AREICG+ + E S G L AH+KIQS ++ FP FSV Y EG E ++PVP LRG+ + + +P TLTP T S I+P A+Y+LRFDG +RGNPGP GAG ++ + + +VRG+++WLGSDPP+TNNEAEY GL+AGLR AK LGIR++CVEGDS L +RQ+LG Y V+NERL VLY EAMALK+ F + S +HV R+ N ADALAN+ALDE+ +GTF + GLR+D Sbjct: 143 YQPHSPFLDQPPAYSHLVFPGGDSKAASKAHQHTNSYLSHVLRLRLRTMDPSSLPPTSSLASPLLAAEGEIVIE-----------------------QGPGSNARKPQPAWCTQVWVGLGRGEREAVYGLIAQGVAAAQALGLKNLQVAAPSAQVAREICGIDAVAE--SKGSKGSQGGDCSLLTAHRKIQSMLKFFPFFSVSY-----RIVKEGHEEDMVLQPVPSLRGSQDGDEEEAHPMPPTTLTPFRTPSTTGFGNGAEDSAVNSEEEDDEEGHARSRHDASPDSPVHRASCPPSAPLPARSHVSKVGTGMRSMSPIINPTAQYLLRFDGGSRGNPGPGGAGIVIYEQA----SLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKTLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENFAEFSIRHVERSQNSDADALANRALDEQCNGTFDSGGLRLD 586
BLAST of NO11G02740 vs. NCBI_GenBank
Match: XP_024519891.1 (uncharacterized protein LOC9630998 isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39 Identity = 120/340 (35.29%), Postives = 176/340 (51.76%), Query Frame = 0 Query: 468 KAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMNPVADALANQALD---EEKSGTFGAHGLRIDAPPPVPVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQAL 805 K ++L++DGA++GNPG AGAGA + + P G +++R + LG+ TNN AEYQGLI GL+ A + ++ V+GDS L +Q+ G + V + L+ L+ EA +L F + + +HV R +N AD LAN+A+D +E L+I P + T +V Y+L +DG S+GNPG GAG ++ + L + G TNN AEY LI GL+AA + + V GDS LV KQ+ GE+ VR+E L+ LHA+ L F F I HV+R +N+EADA+AN+ + Sbjct: 61 KLVHLLQYDGASKGNPGKAGAGALL--RDPDGSVLQELR---IGLGT---ATNNFAEYQGLILGLKGALAQNVTRIRVQGDSNLVCKQVAGIWKVNKDTLKPLHAEAQSLSKKFTEFTIEHVVRELNSAADDLANKAIDLKPQEVVKDVKCIKLQISEPSHQITTKKNKKEVTEESV--------------------------------YVLAYDGASKGNPGKAGAGALLRNPKGSV-IEKLYMGLG---TATNNVAEYEALILGLQAALDRNVTSIQVFGDSNLVCKQVAGEWAVRHEGLRALHAQVQALSMQFTTFSIHHVDREMNTEADALANKGI 356
BLAST of NO11G02740 vs. NCBI_GenBank
Match: XP_024519889.1 (uncharacterized protein LOC9630998 isoform X1 [Selaginella moellendorffii] >XP_024519890.1 uncharacterized protein LOC9630998 isoform X1 [Selaginella moellendorffii] >XP_002990328.2 uncharacterized protein LOC9630998 isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39 Identity = 120/340 (35.29%), Postives = 176/340 (51.76%), Query Frame = 0 Query: 468 KAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMNPVADALANQALD---EEKSGTFGAHGLRIDAPPPVPVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQAL 805 K ++L++DGA++GNPG AGAGA + + P G +++R + LG+ TNN AEYQGLI GL+ A + ++ V+GDS L +Q+ G + V + L+ L+ EA +L F + + +HV R +N AD LAN+A+D +E L+I P + T +V Y+L +DG S+GNPG GAG ++ + L + G TNN AEY LI GL+AA + + V GDS LV KQ+ GE+ VR+E L+ LHA+ L F F I HV+R +N+EADA+AN+ + Sbjct: 79 KLVHLLQYDGASKGNPGKAGAGALL--RDPDGSVLQELR---IGLGT---ATNNFAEYQGLILGLKGALAQNVTRIRVQGDSNLVCKQVAGIWKVNKDTLKPLHAEAQSLSKKFTEFTIEHVVRELNSAADDLANKAIDLKPQEVVKDVKCIKLQISEPSHQITTKKNKKEVTEESV--------------------------------YVLAYDGASKGNPGKAGAGALLRNPKGSV-IEKLYMGLG---TATNNVAEYEALILGLQAALDRNVTSIQVFGDSNLVCKQVAGEWAVRHEGLRALHAQVQALSMQFTTFSIHHVDREMNTEADALANKGI 374
BLAST of NO11G02740 vs. NCBI_GenBank
Match: XP_024523607.1 (uncharacterized protein LOC9648412 isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39 Identity = 120/340 (35.29%), Postives = 176/340 (51.76%), Query Frame = 0 Query: 468 KAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMNPVADALANQALD---EEKSGTFGAHGLRIDAPPPVPVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQAL 805 K ++L++DGA++GNPG AGAGA + + P G +++R + LG+ TNN AEYQGLI GL+ A + ++ V+GDS L +Q+ G + V + L+ L+ EA +L F + + +HV R +N AD LAN+A+D +E L+I P + T +V Y+L +DG S+GNPG GAG ++ + L + G TNN AEY LI GL+AA + + V GDS LV KQ+ GE+ VR+E L+ LHA+ L F F I HV+R +N+EADA+AN+ + Sbjct: 61 KLVHLLQYDGASKGNPGKAGAGALL--RDPDGSVLQELR---IGLGT---ATNNFAEYQGLILGLKGALAQNVTRIRVQGDSNLVCKQVAGIWKVNKDTLKPLHAEAQSLSKKFTEFTIEHVVRELNSAADDLANKAIDLKPQEVVKDVKCIKLQISEPSHQITTKKNKKEVTEESV--------------------------------YVLAYDGASKGNPGKAGAGALLRNPKGSV-IEKLYMGLG---TATNNVAEYEALILGLQAALDRNVTSIQVFGDSNLVCKQVAGEWAVRHEGLRALHAQVQALSMQFTTFSIHHVDREMNTEADALANKGI 356
BLAST of NO11G02740 vs. NCBI_GenBank
Match: XP_024523603.1 (uncharacterized protein LOC9648412 isoform X1 [Selaginella moellendorffii] >XP_024523605.1 uncharacterized protein LOC9648412 isoform X1 [Selaginella moellendorffii] >XP_002994296.2 uncharacterized protein LOC9648412 isoform X1 [Selaginella moellendorffii] >XP_024523606.1 uncharacterized protein LOC9648412 isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39 Identity = 120/340 (35.29%), Postives = 176/340 (51.76%), Query Frame = 0 Query: 468 KAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMNPVADALANQALD---EEKSGTFGAHGLRIDAPPPVPVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQAL 805 K ++L++DGA++GNPG AGAGA + + P G +++R + LG+ TNN AEYQGLI GL+ A + ++ V+GDS L +Q+ G + V + L+ L+ EA +L F + + +HV R +N AD LAN+A+D +E L+I P + T +V Y+L +DG S+GNPG GAG ++ + L + G TNN AEY LI GL+AA + + V GDS LV KQ+ GE+ VR+E L+ LHA+ L F F I HV+R +N+EADA+AN+ + Sbjct: 61 KLVHLLQYDGASKGNPGKAGAGALL--RDPDGSVLQELR---IGLGT---ATNNFAEYQGLILGLKGALAQNVTRIRVQGDSNLVCKQVAGIWKVNKDTLKPLHAEAQSLSKKFTEFTIEHVVRELNSAADDLANKAIDLKPQEVVKDVKCIKLQISEPSHQITTKKNKKEVTEESV--------------------------------YVLAYDGASKGNPGKAGAGALLRNPKGSV-IEKLYMGLG---TATNNVAEYEALILGLQAALDRNVTSIQVFGDSNLVCKQVAGEWAVRHEGLRALHAQVQALSMQFTTFSIHHVDREMNTEADALANKGI 356
BLAST of NO11G02740 vs. NCBI_GenBank
Match: GAX15225.1 (hypothetical protein FisN_12Lh072 [Fistulifera solaris]) HSP 1 Score: 133.7 bits (335), Expect = 2.700e-27 Identity = 114/371 (30.73%), Postives = 176/371 (47.44%), Query Frame = 0 Query: 465 IDPKAEYILRFDGAARGNPGPAGAGAAVFYKTPRGRAGRKVRGVAVWLGSDPPVTNNEAEYQGLIAGLRMAKNLGIRKVCVEGDSLLAIRQMLGEYNVKNERLEVLYREAMALKDGFEDVSFKHVRRAMN-PVADALANQALDEEKSGTFGAHG------------LRIDAPPPV--PVAASRRVAGTGAAVG---AARGEGIGRRG--FSTSATADTPSAHVYNPTAEYLLQFDGGSRGNP-GPGGAGVVIYEKVSQARVRSLALWFGDD--PPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQALDEQRSGTF 813 ++P+ YIL+ G ++ N G G + + + SD + + AEY LI GL A LG++ + +E D + +Q+ G + ++ ++ LY + M L + E + VR N A LA +AL KS G R + PPV P+ AS++ A + G A E S T + + +P YLLQFDGG+RGNP G G G+V+++ + +W G PP++NN AEY ++ GL AK+LGI+R+ +GDS LVVKQ+ G Y+VR+ +LK L ++ F + + H+ R N AD +AN A+D + S F Sbjct: 55 LNPQHTYILQTKGYSKLNADGTGIGIVL-------KDSSSTLTARHYFPSDRAL--SLAEYSALIVGLHYAIQLGVQHLMLETDHAVLAKQLQGIFPMEKRIMKPLYWQVMHLVE--ERLQTFRVRIVPNVEEATELAKRALATNKSSLSQPQGDPMGHAFTGQGKQRKPSVPPVLIPMTASQQQASSDENKGVWPAIPNESSSNDNPTISNENQDTTSTTTIIDPQRTYLLQFDGGARGNPAGKSGCGMVLFDD------QGHEVWCGWKFLPPMSNNMAEYHSILLGLLCAKSLGIQRIQAQGDSELVVKQLNGVYQVRDPKLKELWGPTRDVMQEFQDISVTHIAREYNKRADWLANHAMDTETSFGF 408
BLAST of NO11G02740 vs. NCBI_GenBank
Match: PSC67966.1 (bifunctional RNase H acid phosphatase [Micractinium conductrix]) HSP 1 Score: 132.9 bits (333), Expect = 4.600e-27 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 0 Query: 674 YLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQALDEQRSG 811 + L+FDG S+ NPGP G G VIYE+ V L + GD TNN+AEY GLI GL AA LG R++ V+GDS L+V+Q++G ++V+NE L+ HA A+ L F FE + V RA N+ ADA++NQA+DE RSG Sbjct: 165 FRLEFDGASKQNPGPAGFGAVIYEEAEGEEVHRLCQYMGD--LCTNNQAEYAGLIAGLAAALELGCRQVKVQGDSTLIVQQVLGNWQVKNEGLRPYHAAAVALARRFAGFEAKQVPRAQNAVADALSNQAIDEFRSG 299
BLAST of NO11G02740 vs. NCBI_GenBank
Match: PRW20551.1 (ribonuclease H [Chlorella sorokiniana]) HSP 1 Score: 129.4 bits (324), Expect = 5.100e-26 Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 0 Query: 674 YLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQALDEQRSG 811 + L+FDGGS+GNPGP G G V+Y+ S V L + GD TNN+AEY GLI GL AA LG RL V+GDS+LV+ Q++G ++V+ + L+ H A +L F FE + V R N ADA++NQA+D+ RSG Sbjct: 138 FRLEFDGGSKGNPGPAGFGAVLYDDASGVEVARLCQYIGDHN--TNNQAEYAGLIAGLAAALELGCSRLKVQGDSMLVINQVLGRWQVKTDGLRPYHRLAQQLARRFDHFEAKQVLREFNQAADALSNQAVDDYRSG 272
BLAST of NO11G02740 vs. NCBI_GenBank
Match: CBJ28520.1 (ribonuclease HI [Ectocarpus siliculosus]) HSP 1 Score: 125.9 bits (315), Expect = 5.600e-25 Identity = 86/236 (36.44%), Postives = 121/236 (51.27%), Query Frame = 0 Query: 597 ADALANQALDEEKSGTFGAHGLRIDAPPPVPVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIY---EKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYK------------------VRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQALDEQRSGT 812 A A+ +++ E+S T PP P + + + +RG STS+T + +LLQFDGGSRGNPGP G G V+Y E + V S ++W G+ TNNEAEYRGLIEGL AA+ LGI+RL VEGDS LV++Q++G YK V + +++ L EA + +F E+ H+ RA N AD +AN A+D + S + Sbjct: 112 AQAVIDRSRQRERSNTTEPPRAAGTTAPPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTKPGRQR-----STTHLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGE--KRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSS 340
BLAST of NO11G02740 vs. NCBI_GenBank
Match: XP_022841041.1 (Ribonuclease H1, N-terminal [Ostreococcus tauri] >CEG01575.1 Ribonuclease H1, N-terminal [Ostreococcus tauri]) HSP 1 Score: 124.8 bits (312), Expect = 1.300e-24 Identity = 80/179 (44.69%), Postives = 105/179 (58.66%), Query Frame = 0 Query: 627 PVAASRRVAGTGAAVGAARGEGIGRRGFSTSATADTPSAHVYNPTAEYLLQFDGGSRGNPGPGGAGVVIYEKVSQARVRSLALWFGDDPPLTNNEAEYRGLIEGLRAAKALGIRRLCVEGDSLLVVKQIMGEYKVRNERLKVLHAEAIELKDSFPEFEIRHVERALNSEADAMANQALD 806 PV ASR A A +ARG+ G A+A SA V + EY+L+FDG SRGNPG GAG ++ K V L + G + T NEAEY L GLR A LGI ++ V GDS L+V Q+ G +K+++E L+ +HAEA+ LK F EF+I HV+R N AD +AN A+D Sbjct: 107 PVKASR--ARARGASTSARGDLAGEE----LASARAGSAEV-SSADEYVLEFDGASRGNPGEAGAGALLRRKRDDRVVEELLEYLGSE--RTVNEAEYAALCLGLRKAIELGITKIEVRGDSKLIVNQVDGSFKLKSENLRSMHAEAVSLKKKFAEFKISHVKREFNKHADHLANMAVD 276 The following BLAST results are available for this feature:
BLAST of NO11G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02740 ID=NO11G02740|Name=NO11G02740|organism=Nannochloropsis oceanica|type=gene|length=2881bpback to top protein sequence of NO11G02740.1 >NO11G02740.1-protein ID=NO11G02740.1-protein|Name=NO11G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=826bpback to top Synonyms
Publications
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