NO11G02630, NO11G02630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02630 vs. NCBI_GenBank
Match: EWM24936.1 (ubiquitin carboxyl-terminal hydrolase family1 [Nannochloropsis gaditana]) HSP 1 Score: 253.4 bits (646), Expect = 8.200e-64 Identity = 150/281 (53.38%), Postives = 179/281 (63.70%), Query Frame = 0 Query: 6 PPVASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAI-PAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLP---GEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREE 283 P +A DRWPALES +E +TALLH LL P S P+ FQDVFSLD+D L FV G+TLALILAYD A+ P+ P P P +FIKQ+P LDNACGTIAL+HA +N LP+S SSS LA+ V P GE SE +G RLD E I AAHCE AAQGQ++QVQGDAV+YHF+CL P S ++ELDGLK P++HV G E GK KG E+FL GA VLKREFLA+F+N +ET +NVLALVRE+ Sbjct: 66 PSMAKCDRWPALESDAEVYTALLHTLLSP---------------SSTPSDTRTPSCPFFFQDVFSLDDDYLGFVHGETLALILAYDDRALNPSQESP----PDPQLPIAPIFIKQLPVLDNACGTIALLHAIINTLPASTIPSSSLLAKFVSPIQAGETSFTSESLGIRLDAHEGIRAAHCEHAAQGQSEQVQGDAVRYHFICLIPNPLSPYPAVLELDGLKAHPIIHVGGSENGK-----KG--ETFLQMGAMVLKREFLAQFSNADETQINVLALVRED 320
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_012936301.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase isoform X1 [Aplysia californica]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 81/278 (29.14%), Postives = 130/278 (46.76%), Query Frame = 0 Query: 8 VASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQ-QVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREEED 285 +AS RW LES+ + +H L + ++F DVF LD + LA VP AL+L + I S +P +L + KQ + NACGT+A++HA N + + ++ + L + EE + L++D ++ AAH +CA +G TQ Q + V+ HFV L + + + ELDG K +PV+H T ++FL A+V+K+ F+AR +PE+ + NV+ALV+ +D Sbjct: 1 MASEQRWIPLESNPKVLNKYVHNL--------------------------GMDAGWNFVDVFGLDPELLAMVPRPAAALVLLFPDD--KETVNQLIGEYQSDYPDSLYYTKQ--TIGNACGTVAIVHALANN-ENVIPFDAAKHFKTFLEKTKPLNPEERAKHLEQDNLMGAAHGDCAQEGDTQAPSQDEHVKSHFVALVHCNGT----LYELDGRKEAPVVHGT------------TSADTFLEDAAEVVKK-FMAR--DPEDLSFNVMALVQGGDD 228
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_015633691.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Oryza sativa Japonica Group] >CAE02798.1 OSJNBa0043A12.3 [Oryza sativa Japonica Group] >CAH65997.1 H1005F08.26 [Oryza sativa]) HSP 1 Score: 95.1 bits (235), Expect = 3.700e-16 Identity = 83/278 (29.86%), Postives = 119/278 (42.81%), Query Frame = 0 Query: 7 PVASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFAN-PEETTMNVLALVREEE 284 PV+ G+RWP LESS + F L+ L P F DV+SLD D L VP LA++ + AS P+ + L FIKQI +L NACGTIAL+HA NA S ++ S ++ + + S E L++D+ + AH A+ G T+ D V+ H++C F D + + ELDG+K P+ H +S L ++K A N P NV+ L R+ E Sbjct: 13 PVSPGERWPPLESSPDVFNQLMWSLGVPEDVA-------------------------EFHDVYSLDADALEMVPQPVLAVVFCFP-DPTQDASNPSQHLLITGEKETLFFIKQIESLGNACGTIALLHAVGNAY-SEISLSENSFLDMFIKSTSGMTSYERAVFLEKDDDMARAHLSAASAGDTK--LSDDVEEHYIC-FVECDGT---LYELDGMKPGPINH------------GPSSSKSLLQDAVNIIK----ATMHNIPNSVNFNVIVLSRKAE 241
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_002051831.1 (uncharacterized protein Dvir_GJ17211 [Drosophila virilis] >EDW63986.1 uncharacterized protein Dvir_GJ17211 [Drosophila virilis]) HSP 1 Score: 92.8 bits (229), Expect = 1.800e-15 Identity = 88/286 (30.77%), Postives = 125/286 (43.71%), Query Frame = 0 Query: 14 WPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALIL------------AYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGS----EEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREEE 284 W LES+ E T +HKL SS +S DV LDE+ LA +P +LIL A +H I AA+ P +P +L ++KQ NACGT+ALIH+ N + +A VL E G+ EE G+ L++D H A +GQT + V +HF+ L + + + ELDG K+ P+ H GK + E+F+L AKV K EF+AR +P++ VLAL +E Sbjct: 4 WTPLESNPEVLTKYIHKL--------------------------GVSSAWSVTDVIGLDEELLAMLPRPVKSLILLFPISEAYEKHRAEEHERIKAAAEP------EKYPKDLFYMKQF--THNACGTVALIHSVAN-------NKDIEIAAGVLKNFLEKGANLSPEERGQALEQDNAFTEDHQMLAQEGQTDAGAYETVVHHFIALV----NKENTLYELDGRKSYPISH------GKTSD------ETFVLDAAKVCK-EFMAR--DPDDVRFTVLALAATQE 229
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_006652981.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform X1 [Oryza brachyantha]) HSP 1 Score: 92.0 bits (227), Expect = 3.200e-15 Identity = 86/280 (30.71%), Postives = 115/280 (41.07%), Query Frame = 0 Query: 8 VASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFAN-PEETTMNVLALVREEEDEG 287 V+ +RWP LESS + F L+ L P F DV+SLD D L VP LA+I + AS P+ + L FIKQI +L NACGTIALIHA NA P +S+L S E L++D+ + AH A+ G T+ D V+ H++C F D + + ELDG+K P+ H ES L ++K A N P NV+ L R+ E G Sbjct: 16 VSPDERWPPLESSPDVFNQLMWSLGVPEDVA-------------------------EFHDVYSLDADALEMVPRPVLAVIFCFP-DPTQDASNPSQHVLVTGEKETLFFIKQIESLGNACGTIALIHAVGNAYPEISLLKNSSLDTFA-KSSSGMTSYERAMFLEKDDDMARAHSVAASAGDTK--LSDDVEEHYIC-FVECDGT---LYELDGMKPGPIKH------------GSSSPESLLQDAVNIIK----ATMHNIPNSVKFNVMVLSRKAEQYG 246
BLAST of NO11G02630 vs. NCBI_GenBank
Match: AEV40951.1 (putative ubiquitin carboxyl-terminal hydrolase family1 [Oryza punctata]) HSP 1 Score: 90.9 bits (224), Expect = 7.000e-15 Identity = 72/223 (32.29%), Postives = 102/223 (45.74%), Query Frame = 0 Query: 7 PVASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMH 230 PV+ G+RWP LESS + F L+ L P F DV+SLD D L VP LA+I + AS P+ + L FIKQI +L NACGTIAL+HA NA S ++ ++ + + S E L++D+ + AH A+ G T+ D V+ H++C F D + + ELDG+K P+ H Sbjct: 13 PVSPGERWPPLESSPDVFNQLMWSLGVPEDVA-------------------------EFHDVYSLDVDALEMVPQPVLAVIFCFP-DPTQDASNPSQHVLITGEKETLFFIKQIESLGNACGTIALLHAVGNAY-SEISLCKNSCLDMFVKSTSGMTSYERAVFLEKDDDMARAHLLAASAGDTK--LSDDVEEHYIC-FVECDGT---LYELDGMKPGPINH 202
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_020805933.1 (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase [Drosophila serrata]) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-14 Identity = 80/274 (29.20%), Postives = 113/274 (41.24%), Query Frame = 0 Query: 14 WPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAY----DHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREEE 284 W LES+ E T +HKL S +S DV LDED L ++P A IL + + A I+ P NL +++Q NACGT+ALIH+ N + S + + L EE G+ L+ D+ A H A +GQT + + V +HF+ L + + ELDG K+ P+ H E E+F+ AKV K EF+AR +P E VLAL +E Sbjct: 4 WTPLESNPEVLTKYIHKL--------------------------GVSPAWSVTDVIGLDEDTLEWIPRPVKAFILLFPCSESYEKHRAEEHERIKEVKEEHPXNLFYMRQF--THNACGTVALIHSVAN---NKEVGIGSGVLKSFLEKTASLSPEERGQALENDKDFTADHQALAQEGQTNASEHETVIHHFIALVNIEGT----LYELDGRKSFPIKHGATSE------------ETFVKDAAKVCK-EFMAR--DPNEVRFTVLALTAAQE 227
BLAST of NO11G02630 vs. NCBI_GenBank
Match: AEV41001.1 (putative ubiquitin carboxyl-terminal hydrolase family1 [Oryza minuta]) HSP 1 Score: 89.4 bits (220), Expect = 2.000e-14 Identity = 71/223 (31.84%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 7 PVASGDRWPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAYDHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMH 230 PV+ G+RWP LESS + F L+ L P F DV+SLD D L VP LA+I + AS P+ + L FIKQI +L NACGTIAL+HA NA S ++ ++ + + S E L++D+ + AH A+ G T+ + + V+ H++C F D + + ELDG+K P+ H Sbjct: 13 PVSPGERWPPLESSPDVFNQLMWSLGVPEDVA-------------------------EFHDVYSLDVDALEMVPQPVLAVIFCFP-DPTQDASNPSQHVLITGEKETLFFIKQIESLGNACGTIALLHAVGNAY-SEISLCKNSCLDMFVKSTSGMTSYERAVFLEKDDDMARAHLLAASAGDTKLL--NDVEEHYIC-FVECDGT---LYELDGMKPGPINH 202
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_017130078.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase [Drosophila elegans]) HSP 1 Score: 88.6 bits (218), Expect = 3.500e-14 Identity = 79/274 (28.83%), Postives = 117/274 (42.70%), Query Frame = 0 Query: 14 WPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAY----DHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREEE 284 W LES+ E T +HKL S +S DV LDED L ++P A IL + + A I+ +PA+L +++Q + NACGT+ALIH+ N + + + + L EE G+ L+ D+ A H A +GQT + + V +HF+ L + + ELDG K+ P+ H G E E+F+ AKV K EF+AR +P E VLAL ++ Sbjct: 4 WTPLESNPEVLTKYIHKL--------------------------GVSPAWSVNDVIGLDEDTLEWIPRPVKAFILLFPCSESYEKHRAEEHERIKEVKDDYPADLFYMRQFTS--NACGTVALIHSVAN---NKEVEIDNGVLKAFLEKTASLSPEERGQALETDKDFTADHQALAQEGQTNAAEHETVIHHFIALV----NKEGTLYELDGRKSFPIKH------GPTSE------ETFVKDAAKVCK-EFMAR--DPNEVRFTVLALTPAQD 227
BLAST of NO11G02630 vs. NCBI_GenBank
Match: XP_017022157.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase [Drosophila kikkawai]) HSP 1 Score: 88.2 bits (217), Expect = 4.600e-14 Identity = 79/274 (28.83%), Postives = 114/274 (41.61%), Query Frame = 0 Query: 14 WPALESSSEAFTALLHKLLRPHXXXXXXXXXXXXXXXXXXXXXXXXSSPYSFQDVFSLDEDCLAFVPGKTLALILAY----DHSAIPAASGPAIERPTSTFPANLVFIKQIPALDNACGTIALIHAALNALPSSVTSSSSALARLVLPGEEEGGSEEMGRRLDRDEVIHAAHCECAAQGQTQQVQGDAVQYHFVCLFPASDSSPHLIVELDGLKTSPVMHVTGREEGKEEEXEKGEKESFLLSGAKVLKREFLARFANPEETTMNVLALVREEE 284 W LES+ E T +HKL S +S DV LDED L ++P A IL + + A I+ P+NL +++Q NACGT+ALIH+ N + + + + L EE G+ L+ D+ A H A +GQT + + V +HF+ L + + ELDG K+ P+ H E ESF+ AKV K EF+AR +P E VLAL ++ Sbjct: 4 WIPLESNPEVLTKYIHKL--------------------------GVSPAWSVTDVIGLDEDTLEWIPRPVKAFILLFPCSESYEKHRAEEHERIKEVKEEHPSNLFYMRQF--THNACGTVALIHSVAN---NKEVDIDTGVLKSFLEKTASLTPEERGQALETDQDFTADHQALAQEGQTNASEHETVIHHFIALVNIEGT----LYELDGRKSFPIKHGATSE------------ESFVKDAAKVCK-EFMAR--DPNEVRFTVLALTAAQD 227 The following BLAST results are available for this feature:
BLAST of NO11G02630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02630 ID=NO11G02630|Name=NO11G02630|organism=Nannochloropsis oceanica|type=gene|length=1484bpback to top protein sequence of NO11G02630.1 >NO11G02630.1-protein ID=NO11G02630.1-protein|Name=NO11G02630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top Synonyms
Publications
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