NO11G02570, NO11G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_005853458.1 (signal peptidase, endoplasmic reticulum-type [Nannochloropsis gaditana CCMP526] >EKU22901.1 signal peptidase, endoplasmic reticulum-type [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 357.5 bits (916), Expect = 2.700e-95 Identity = 179/190 (94.21%), Postives = 186/190 (97.89%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRML 191 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIA LDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGA+LYF+DYLGSMQK+NFGAQGYA+NFTLSIFDREY+EG+TL EAE +LEKAKKELAVRFLISQPKWIMKVVDKDGVR L Sbjct: 173 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVRTL 362
BLAST of NO11G02570 vs. NCBI_GenBank
Match: EWM24937.1 (proteasome chain protein [Nannochloropsis gaditana]) HSP 1 Score: 357.5 bits (916), Expect = 2.700e-95 Identity = 179/190 (94.21%), Postives = 186/190 (97.89%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRML 191 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIA LDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGA+LYF+DYLGSMQK+NFGAQGYA+NFTLSIFDREY+EG+TL EAE +LEKAKKELAVRFLISQPKWIMKVVDKDGVR L Sbjct: 45 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVRTL 234
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_002178756.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49454.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 225.7 bits (574), Expect = 1.200e-55 Identity = 108/189 (57.14%), Postives = 146/189 (77.25%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRM 190 MDT+ G++ +G V++AAD S ARSIL+++T+ DK+ +L SH + +GPN D N E+V KN+ LYE +ND+KL THA ANF R LATALRKGP+Q N LLGGFD K GASLY++DY+ ++QK+N+G+QGYA+NF LSI D+EY++ L A+A +I+E+ EL RFLISQ +I+KVVDKDGVR+ Sbjct: 1 MDTVFGVQYEGGVILAADQSNARSILLYQTNLDKVKELTSHSAMGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALRKGPFQVNTLLGGFDNKVGASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVKIVEQCIHELHTRFLISQKNFIIKVVDKDGVRL 189
BLAST of NO11G02570 vs. NCBI_GenBank
Match: CBN79826.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 224.6 bits (571), Expect = 2.700e-55 Identity = 113/194 (58.25%), Postives = 148/194 (76.29%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDE----KDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRML 191 MDTLLGI G+GFV++AADA ARSIL++K + DKIA L +K LA AGP +DC + TEY+ KNMALYE NND+KL T AAA FIR LA ALRKGP+QT LL+GG D+ KD ASL+++DYLG++QK+ +GA GY A FTLS+ DREY +GL+L EA I++ KEL RFLI+Q +++KVV +G++++ Sbjct: 1 MDTLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDEALGIIDNCIKELHTRFLIAQKNFVIKVVTAEGIKVV 194
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_009038264.1 (hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens] >EGB07027.1 hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]) HSP 1 Score: 221.9 bits (564), Expect = 1.700e-54 Identity = 110/190 (57.89%), Postives = 139/190 (73.16%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRML 191 M+T +G+ G+G+ ++ AD +AARSI+ FK D+DKI +LD KLL +G AD TEYVQKN+ALY+ NN L L T A NFIR LATALRKGPYQTNLLLGGFD+ GASLY++DY+ S K+NFG GY +NF LSI DRE+ EGL A +I+ K EL RFLI PK+++K+VDKDG+R+L Sbjct: 1 METTIGLLGNGYAIVCADQNAARSIVCFKKDEDKIMKLDDFKLLGQSGVGADNVAFTEYVQKNVALYKINNGLSLSTKATNNFIRGDLATALRKGPYQTNLLLGGFDKGVGASLYYIDYMASSNKVNFGCHGYGSNFVLSILDREWTEGLDEAAGLDIINKCIAELQTRFLIHMPKFLIKIVDKDGIRVL 190
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_004341316.1 (proteasome subunit beta type2, putative [Acanthamoeba castellanii str. Neff] >ELR19231.1 proteasome subunit beta type2, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 212.2 bits (539), Expect = 1.400e-51 Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 0 Query: 2 DTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVRML 191 D+L+G+ G +VLIAAD + ARS+L K D DKI LDSHKLL A GP D + TEYVQ+N+ LY+F N+L LGTHA ANF+R LA ALR PYQ NLLLGG DE +G +LYF+DYL SM KL + A GY A F LSI D+ YK+ LTL + +I+EK EL RF+I+ P +++KVVDK+G R++ Sbjct: 3 DSLIGLVGADYVLIAADTTTARSVLKMKLDDDKIMALDSHKLLGAVGPVGDRVHFTEYVQRNLKLYKFRNNLTLGTHATANFVRGELADALRSSPYQVNLLLGGVDE-EGPALYFLDYLASMDKLEYAAHGYCAYFCLSILDKYYKKDLTLEQGIDIIEKCITELRARFIINSPDFVIKVVDKNGTRVV 190
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_008877218.1 (hypothetical protein H310_12064 [Aphanomyces invadans] >ETV94015.1 hypothetical protein H310_12064 [Aphanomyces invadans]) HSP 1 Score: 208.4 bits (529), Expect = 2.000e-50 Identity = 107/198 (54.04%), Postives = 135/198 (68.18%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDE----------KDGA-SLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGV 188 M++L GI G FV++ AD+ ARSILV+K D+DKI LDSHK++A +GP AD EY+QKN+ LY+ N + L HAAANF+R LA LRK P Q NLLLG FD DG SLY+ DYLGS+ K+N+GAQGY A+F LSI DRE++E LTLAEA++IL+ EL RFL+ WI K++DKDGV Sbjct: 1 MESLFGIVGKDFVIVGADSKVARSILVYKDDEDKIQALDSHKVIAGSGPQADRVEFCEYIQKNLKLYQLTNGVTLNGHAAANFVRNELAQRLRKAPVQLNLLLGAFDAANPNVPTADGSDGVPSLYWADYLGSLSKVNYGAQGYGAHFCLSILDREWRENLTLAEAKQILKHCNNELNERFLVRSGTWIYKMIDKDGV 198
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_009844170.1 (hypothetical protein H257_17177 [Aphanomyces astaci] >ETV66395.1 hypothetical protein H257_17177 [Aphanomyces astaci]) HSP 1 Score: 204.9 bits (520), Expect = 2.200e-49 Identity = 106/198 (53.54%), Postives = 134/198 (67.68%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFD---EKDGA--------SLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGV 188 M++L GI G FV++ AD+ ARSILV+K D+DK+ LDSHKL+A AGP AD EY+QKN+ LY+ N + L HAAAN++R LA LRK P Q NLLLG FD D A SLY+ DY G++ K+N+GAQGY A+F LSI DRE++E LTLAEA+ IL EL+ RFL+ KWI KV+DKDG+ Sbjct: 1 MESLFGIVGKDFVILGADSKVARSILVYKDDEDKMQALDSHKLIAGAGPQADRVEFCEYIQKNLKLYQLTNGVTLNGHAAANYVRGELAQRLRKAPVQLNLLLGAFDVANPNDPATAATGGVPSLYWADYFGALNKVNYGAQGYGAHFCLSILDREWRENLTLAEAKVILTHCNNELSERFLVRSGKWIYKVIDKDGI 198
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_002314682.1 (proteasome subunit beta type-2-A [Populus trichocarpa] >XP_011030663.1 PREDICTED: proteasome subunit beta type-2-A [Populus euphratica] >XP_011013878.1 PREDICTED: proteasome subunit beta type-2-A [Populus euphratica] >ABK96308.1 unknown [Populus trichocarpa x Populus deltoides] >PNT15440.1 hypothetical protein POPTR_010G084800v3 [Populus trichocarpa]) HSP 1 Score: 202.2 bits (513), Expect = 1.400e-48 Identity = 94/188 (50.00%), Postives = 138/188 (73.40%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVR 189 M+ + G+ GDGFV++A+D SA SILV KT++DKI +LDSHKL+AA+G + D TEY+QKN+ALY+F N + L T AAANF R LATALRK PY N+LL G+D++ G SLY++DY+ ++ K++ GA GY + F LS+ DR Y G+++ EA E+++K E+ R +++ P +++K+VD+DG R Sbjct: 1 MECVFGLVGDGFVIVASDTSAVNSILVHKTNEDKIMKLDSHKLVAASGESGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYMVNILLAGYDKETGPSLYYIDYIATLHKVDRGAFGYGSYFCLSMMDRHYHSGMSVEEAVELVDKCITEIQSRLVVAPPNFVIKIVDRDGAR 188
BLAST of NO11G02570 vs. NCBI_GenBank
Match: XP_007223462.1 (proteasome subunit beta type-2-A [Prunus persica] >XP_008224283.1 PREDICTED: proteasome subunit beta type-2-A [Prunus mume] >ONI26323.1 hypothetical protein PRUPE_1G017400 [Prunus persica] >ONI26324.1 hypothetical protein PRUPE_1G017400 [Prunus persica]) HSP 1 Score: 201.1 bits (510), Expect = 3.200e-48 Identity = 95/188 (50.53%), Postives = 136/188 (72.34%), Query Frame = 0 Query: 1 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAQLDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGASLYFMDYLGSMQKLNFGAQGYAANFTLSIFDREYKEGLTLAEAEEILEKAKKELAVRFLISQPKWIMKVVDKDGVR 189 M+++ G+ GDGF ++AAD SA SILV K+++DKI LDSHKL+AA+G D TEY+QKN+ALY+F N + L T AAANF R LATALRK PY N+L+ GFD++ GASLY++DY+ S+ K+ GA GY + F LS+ DR Y G+++ EA ++++K E+ R +++ P +++K+VDKDG R Sbjct: 1 MESIFGLVGDGFAVVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYMVNILMAGFDKEAGASLYYIDYIASLHKVEKGAFGYGSYFALSLMDRHYHSGMSVEEAIDLVDKCIIEIRSRLVVAPPNFVIKIVDKDGAR 188 The following BLAST results are available for this feature:
BLAST of NO11G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02570 ID=NO11G02570|Name=NO11G02570|organism=Nannochloropsis oceanica|type=gene|length=573bpback to top protein sequence of NO11G02570.1 >NO11G02570.1-protein ID=NO11G02570.1-protein|Name=NO11G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=191bpback to top Synonyms
Publications
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