NO11G02560, NO11G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_001417883.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO96176.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 148.7 bits (374), Expect = 5.000e-32 Identity = 94/263 (35.74%), Postives = 153/263 (58.17%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIP-ERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQ 312 SR+D Q KA++AL H K VAS+K Q L + + ++L + P E S + VP+ +PHPL D +CLIVK+ + + K+ +A M GV++V+G+ +L+ +Y+ +++RKL D++D+FL DDR+LPLL K LGK FF KKK P+++ + + +A + + + A T+L+ + G C+ +KV K++ ++ N +A IEGAV +P +W N+ +I +KT SVALP+Y P+ Sbjct: 36 SRVDVDQVRKAIEALATHIEK----VASEK--PQSALFEDEAETFSALISLRRTPKEATSARLVPVPIPHPLL-----DLASAELCLIVKDHQGEGHKEAKKRVAEMAKCGVAKVLGISKLKANYKAHEQKRKLCDSYDMFLADDRVLPLLPKLLGKNFFKKKKQPVAVDL-----TKKDWVAQIQRAVGA----TYLHVSGGTCVNVKVGKSTMEVDEIVENTMAAIEGAVSKIPRRWGNIQSIYIKTPDSVALPVYVAPPE 278
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_022159732.1 (ribosomal L1 domain-containing protein 1-like [Momordica charantia]) HSP 1 Score: 147.9 bits (372), Expect = 8.500e-32 Identity = 98/278 (35.25%), Postives = 148/278 (53.24%), Query Frame = 0 Query: 42 AATSTITPLPPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG----VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 A+ ++ P SR++ A KAV++LLQ + K K L E D++ + V L KIP + P I LPH LH E +CLI+ + K+ + + A K++ +S+V+ L +L++DYR F+ +RKL D++D+F DDR++PLL LGK FF KKK P+ L + + + + K +A LY G C +KVAKTS +++NV+A I+G E +P KW NV + LK S+ALP+YQ +P K Sbjct: 2 ASPGSVCVPPSSRVNQQTAEKAVESLLQW--------RNSKREKPQLFDQE--DFLYLVVTLRKIPPKGRTNPYKIPLPHSLH------SESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNL-----RHKNWKEQIEKSCASAL----LYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESIALPIYQSVPDLKFK 254
BLAST of NO11G02560 vs. NCBI_GenBank
Match: ORX45446.1 (ribosomal protein L1 [Piromyces finnis]) HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31 Identity = 86/266 (32.33%), Postives = 149/266 (56.02%), Query Frame = 0 Query: 55 IDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEP 321 ++ Q +KA ALL+++ + K DLLA ++ ++++ + +P+ KP+ I L +P+ +E VCLI K D +++ K L + + +++V+G+ +L+ Y+ ++ +R+L ++D+FL DDRI+P++ K +GKTF+ KKK P+ +K+ + K I A T+ + N+G C +IKV TS P + N++ I V+ +PGKWKN+ +S+KT+ SVALP+Y LP K EP Sbjct: 3 LNEAQVNKATSALLKYFESTK---------KNDLLADDSPVWLVLSTKI--LPDNSRVKPIKIPLKYPIF------DENSEVCLITK-DPQSEYKEMLKELGITRINKVIGVTKLKKKYKPYEAKRQLCSSYDIFLADDRIIPIVPKLIGKTFYEKKKQPVPIKM---------KKGVLLKEITNALNSTYFFVNNGGCSSIKVGLTSQTPEQIAENIMYSINYIVDKVPGKWKNIQRLSIKTNKSVALPIYSSLPDEAKKIEFEP 241
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_022958691.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita moschata]) HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31 Identity = 97/267 (36.33%), Postives = 144/267 (53.93%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG----VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 SR+ A KAV++LLQ S K K LL E D++ + V L KIP + P I LPHPL E +CLI+ + K+ + + A K++ +S+V+ L +L++DYR F+ +RKL D++D+F DDR++P+L LGK F+ KKK P+ L + + + + K +A LY G C +KVAKTS ++ NV+A I+G E +P KW NV + LK S+ALPLYQ +P+ +K Sbjct: 11 SRVRRETAEKAVESLLQW--------RSSKREKPQLLDQE--DFLYLVVTLKKIPPKGRTNPYKIPLPHPLR------SESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNL-----RHKNWKEQIEKSCSSAL----LYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELKMK 252
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_023521630.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31 Identity = 97/267 (36.33%), Postives = 142/267 (53.18%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG----VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 SR+ A KAV++LLQ S K K LL E D++ + V L KIP + P I LPHPL E +CLI+ + K+ + + A K++ +S+V+ L +L++DYR F+ +RKL D++D+F DDR++P+L LGK FF KKK P+ L + ++I + LY G C +KVAKTS ++ NV+A I+G E +P KW NV + LK S+ALPLYQ +P+ +K Sbjct: 11 SRVRRETAEKAVESLLQW--------RSSKREKPQLLDQE--DFLYLVVTLKKIPPKGRTNPYKIPLPHPLR------SESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNL---------RHKNWKEQIEKSCSSGLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELKMK 252
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_023532538.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31 Identity = 97/267 (36.33%), Postives = 142/267 (53.18%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG----VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 SR+ A KAV++LLQ S K K LL E D++ + V L KIP + P I LPHPL E +CLI+ + K+ + + A K++ +S+V+ L +L++DYR F+ +RKL D++D+F DDR++P+L LGK FF KKK P+ L + ++I + LY G C +KVAKTS ++ NV+A I+G E +P KW NV + LK S+ALPLYQ +P+ +K Sbjct: 11 SRVRRETAEKAVESLLQW--------RSSKREKPQLLDQE--DFLYLVVTLKKIPPKGRTNPYKIPLPHPLR------SESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNL---------RHKNWKEQIEKSCSSGLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELKMK 252
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_012200214.1 (hypothetical protein SPRG_06099 [Saprolegnia parasitica CBS 223.65] >KDO29044.1 hypothetical protein SPRG_06099 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31 Identity = 89/257 (34.63%), Postives = 147/257 (57.20%), Query Frame = 0 Query: 54 RIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLP 311 ++D Q +KAV AL Q K +A+ A + L +A + L+ V +P + S KP+ I LPH + G+ CL VK+ DK ++K AL +EG+++V+G+++L+ + +F++RR+L+ +F FL DDR+LP L LGKTFF KK P ++ + S+P +R++A T ++ + G C +K+A + ++ N++ G E V +P KWKN+ +IS+KT+ S+ALP+Y LP Sbjct: 3 QVDREQVTKAVVALQQVLQKKRASAA------KQALVEDANVFSLI-VTRNSVPPKASLKPILIDLPHSIRADGE-------ACLFVKDADKKRIKEALEADPVEGLTKVMGIKKLKKHFHQFKDRRELKVSFATFLADDRVLPYLKTLLGKTFFDAKKQPRTVDVSANNVSDPI------RRVLAG---TAMFVSTGPCFNVKIAHDGLELSQIVDNIMDGTETIVSYVPKKWKNIKSISIKTNDSMALPIYNALP 236
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_010247514.1 (PREDICTED: ribosomal L1 domain-containing protein 1-like [Nelumbo nucifera]) HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31 Identity = 99/276 (35.87%), Postives = 146/276 (52.90%), Query Frame = 0 Query: 44 TSTITPLPPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG----VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 TS P SR+ + KAV ALL+ + K +Q+ E D+V + + L KIPE+ P I LPHPLH D E +CLI+ + K+++ A K+E V+ V+ L +LR+DYR F+++R+L ++FD+F D RI+PLL + LGK FF +KK P+ + + + ++I A LY G C +KVA+ S ++ NV+A I G E +P KW NV + LK S+ALPLYQ +PQ +K Sbjct: 2 TSNNPSAPSSRVSSETVGKAVDALLKW--------INAKKKQQNAQLFEEDDFVYLILTLKKIPEQGRTNPYKISLPHPLH-----DTSEEEICLIIDDRPKSRLTFDAATKKVEADNIPVNLVLRLSQLRSDYRNFEKKRQLCNSFDIFFADKRIIPLLPRLLGKQFFKRKKIPVPVDL---------THKNWKEQIEFASGSALLYLRTGTCCVLKVARISMGRDGIVENVVAAINGVGEIVPKKWANVRSFHLKLLESLALPLYQTVPQMGMK 255
BLAST of NO11G02560 vs. NCBI_GenBank
Match: ORY27971.1 (ribosomal protein L1 [Neocallimastix californiae]) HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31 Identity = 94/269 (34.94%), Postives = 153/269 (56.88%), Query Frame = 0 Query: 55 IDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKI-PERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKI--GGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEP 321 ++ Q +KA ALL+++ + K DLLA E+ ++ V + KI PE KP+ I L +P++ KD E VCLI K D +++ K L + +++V+G+ +L+ Y+ ++ +R+L +++D+FL DDR++P+L K +GK+F+ KKK+P+ +K+ G LL K I A T+ + N G C +IK+ T+ P + N++ I VE +PGKWKN+ +S+KT+ SVALP+Y LP K EP Sbjct: 3 LNEAQVNKATSALLKYFESTK---------KNDLLADESPVWL---VLVTKIPPENSKVKPIRIPLKYPIY--DKDTE----VCLITK-DPQSEYKEMLKEQGITSINKVIGVTKLKKKYKPYEAKRQLCNSYDIFLSDDRVIPILPKLIGKSFYEKKKNPVPIKMKKGSLL-----------KEITNALNSTYYFVNSGGCSSIKIGLTNQTPEEIAENIMYSINYIVEKVPGKWKNIQRLSIKTNKSVALPIYSSLPDEAKKIEFEP 241
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_003059514.1 (predicted protein, partial [Micromonas pusilla CCMP1545] >EEH56646.1 predicted protein, partial [Micromonas pusilla CCMP1545]) HSP 1 Score: 146.7 bits (369), Expect = 1.900e-31 Identity = 92/248 (37.10%), Postives = 141/248 (56.85%), Query Frame = 0 Query: 63 AVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVL-VQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLY 307 AV AL +H K + K L + GD V V+ K P++ S K VPIR+PHPL D + +CLIVK+ + + K+ +A M+ GV++V+G+ +LR +Y+ + +R+L D++DLFL D R++P+L K LGK+FF KKK P+ + + + K++ A T+++ G C+ +KVAK F V+ N +A I G VE +P KW NV ++ +KT+ SVALPLY Sbjct: 1 AVHALKKHLEK------VRSEAKTQLFDEDGGDETFSVLVSTRKTPQKGSNKLVPIRVPHPLL-----DLKTAEICLIVKDKEGEGHKEAKKKVAEMEKCGVAKVLGISKLRNNYKPHEAKRQLCDSYDLFLADARVIPVLPKLLGKSFFVKKKQPVPVDL---------TKQDWPKQVRKAASATYVHVGAGTCVHVKVAKARFSVEDVVENAMAAIAGVVEIIPRKWANVQSVYMKTNESVALPLY 228 The following BLAST results are available for this feature:
BLAST of NO11G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02560 ID=NO11G02560|Name=NO11G02560|organism=Nannochloropsis oceanica|type=gene|length=3154bpback to top protein sequence of NO11G02560.1 >NO11G02560.1-protein ID=NO11G02560.1-protein|Name=NO11G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bpback to top Synonyms
Publications
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