NO11G02560, NO11G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02560 vs. NCBI_GenBank
Match: EWM24932.1 (hypothetical protein Naga_100086g5 [Nannochloropsis gaditana]) HSP 1 Score: 445.3 bits (1144), Expect = 2.600e-121 Identity = 227/280 (81.07%), Postives = 253/280 (90.36%), Query Frame = 0 Query: 38 TSPRAATSTITPLPPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKP 318 T T+ LPPSR+DA QA++AV+ALLQH A+HQA VASKK KQDLLASEAGDY+L+Q+ALAKIPERVSPKPVP+ LPHPLHGSG DD+E+HAVCLIVKE DK KV+RAL MKM+GV EVVGLQELRTDY+EFQERR+LRDAFDLFLVDDRILPLLGKALGKTFFSKKKHP++LK+GGLLSSNP +MATVGKRIIAAQQRTHLYRNHGNCL++KVAKTSF PA +ANVLAGIE AVEA PGKWKNVMAIS+KTS+SVALPLYQRLPQYL+KKP Sbjct: 37 TDEAQTTADKLTLPPSRVDATQATRAVEALLQHNARHQALVASKK-SKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKP 315
BLAST of NO11G02560 vs. NCBI_GenBank
Match: CBJ27277.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 188.3 bits (477), Expect = 5.700e-44 Identity = 108/254 (42.52%), Postives = 153/254 (60.24%), Query Frame = 0 Query: 56 DALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRL 310 D Q +A +ALL+H V S GKQ L+ E G+ VL Q++L KIP V KPVPI +PHPL E+ +CLIVK++ K +K +EG+++++ L +LRT Y++F++RR+L FDLFL DDRILP+L KALGKTF KK P+ +K+ A+ K+I A+ L +HG+C A+K+A TS V+ N++ G+ VE +P KWKNV AI++K S SVALP+Y + Sbjct: 5 DEAQVRRAARALLKH-------VNSSAAGKQSLIEDE-GEVVLAQISLHKIPGDVKAKPVPIAIPHPLR-----KREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKL--------ERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNI 237
BLAST of NO11G02560 vs. NCBI_GenBank
Match: OQR92582.1 (hypothetical protein ACHHYP_03487 [Achlya hypogyna]) HSP 1 Score: 154.5 bits (389), Expect = 9.100e-34 Identity = 94/257 (36.58%), Postives = 145/257 (56.42%), Query Frame = 0 Query: 54 RIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLP 311 ++D Q ++AV AL ++ AK A+ KQ L+ E + + V A IP + S K +PI LPH + G CL VK+ DK ++K ALA + G+++V+G+++L+ + +F++RR+L+ +F FL DDR+LP L LGK FF KK PI++ + G S+P A G T ++ + G C +KVA A ++ N+L+G E V +P WKN+ +IS+KT+ SVALP+Y LP Sbjct: 3 QLDRDQVTRAVGALKEYLAK-----AASANAKQALV--EDAKVISLIVTRATIPPKGSLKAIPIPLPHSIQADGD-------ACLFVKDADKKRIKEALASDPVAGLTKVMGIKKLKKHFGQFKDRRELKASFATFLADDRVLPYLKSLLGKPFFEAKKQPITVHVSGKNVSDPVRRALAG---------TAMFVSTGPCFNVKVAHDGLDTAAIVENILSGTEAVVSYVPKGWKNIKSISIKTNDSVALPIYNALP 236
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_009037332.1 (hypothetical protein AURANDRAFT_37654 [Aureococcus anophagefferens] >EGB07965.1 hypothetical protein AURANDRAFT_37654 [Aureococcus anophagefferens]) HSP 1 Score: 152.1 bits (383), Expect = 4.500e-33 Identity = 102/262 (38.93%), Postives = 145/262 (55.34%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKMEG---VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAV-EALPGKWKNVMAISLKTSASVALPLYQRLP 311 S + A +KAV+ALL A SK+G DL A D++ VQ+ L + P SPKP + LPHPL D E + CLIVK DK +K + G V +V+ +LR+ Y++++++R+LRD FD+FL DDR+ P+LGK LG TFF +KK PI +K+ + P S+A +I A H+ G C+A +A T +ANV+AG+ V + +P KW NV+++SLK S ALPLY P Sbjct: 4 SPLVASDVTKAVKALL--------AYRSKQGRGLDLDA----DFLTVQIGLKQAPITPSPKPRLVALPHPL-----KDASELSCCLIVKAADKPWLKALAVDGEAPGPKLVDKVLAFDKLRSSYKQYKDKRELRDRFDVFLADDRVAPMLGKLLGSTFFGRKKQPIVVKV-----TRPESLAA---QIRKATASAHVVLKEGTCVAANLAHTDMSADECVANVVAGVNAVVGDLVPKKWNNVLSVSLKLPESAALPLYNADP 240
BLAST of NO11G02560 vs. NCBI_GenBank
Match: OUW42288.1 (hypothetical protein CBD41_09255 [bacterium TMED181]) HSP 1 Score: 151.8 bits (382), Expect = 5.900e-33 Identity = 96/275 (34.91%), Postives = 153/275 (55.64%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEA-GDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEA 324 SR++ Q KAV AL +H K +A GK L + GD+ + V+ ++P++ S K VP+++PHPL K + +CLIVK+ + K+ +A M++ GV++V+G+ +LR +Y+ + +R+L D++DLF D R+LP+L K LGK+FF KKK PI + + A K+ AA T+ + G C+ +KV + V N +A IE V+ +P KW NV +I +KT+ SVALP++ LP +K ++A Sbjct: 5 SRVNPAQVKKAVAALAKHLEKVKAE------GKVQLFEEDGDGDHYSILVSTRRVPQKGSNKLVPVKIPHPLLNPDKTE-----ICLIVKDHEGEGHKAAKKKVADMEVCGVAKVLGISKLRNNYKPHEAKRQLCDSYDLFCADARVLPILPKLLGKSFFKKKKQPIPVDL------TKKDWAAQIKKAAAA---TYAHMGAGTCIHLKVGTSGMEVGKVTENAIAAIENLVQHVPRKWSNVQSIYMKTNESVALPVFSALPDPEEEKAAREEDA 259
BLAST of NO11G02560 vs. NCBI_GenBank
Match: EJK66104.1 (hypothetical protein THAOC_12993 [Thalassiosira oceanica]) HSP 1 Score: 151.4 bits (381), Expect = 7.700e-33 Identity = 105/284 (36.97%), Postives = 153/284 (53.87%), Query Frame = 0 Query: 51 PPSRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPL--------HGSGKDDEEEHAVCLIVKEDDKAKVKRALAVMKME--GVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEAV 325 P ++ +A++ALL+H H+A K LL E V VQ LA+IP R SPKP+ I +PH L G +D E C+IVKE+ K V+ +A E + +V+GLQ LRT ++ F +RR+L FD+F DDRILP+L KALG FF KKK PI +K+ + + I + T +Y + G C+ +K T+ P + +L N++A +P KW NV +IS+KTS+SV+LP+Y++ PQ L + I +E V Sbjct: 8 PTVGVEEALTDRALRALLKH---HEAT-----SSKDQLLGDELD--VQVQFGLARIP-RGSPKPIRIEIPHSLVKVDGDGQEGGNEDYIREVDACIIVKEESKPWVQELIARFPSELGCIKKVLGLQSLRTKHKSFTQRRELLARFDVFFADDRILPMLTKALGGKFFEKKKQPIPVKL--------TRKEALPFMIQKCLKSTFMYLSAGTCITVKAGNTAMPSSKLLDNIVAVCAEVPTKVPRKWANVGSISIKTSSSVSLPIYKKTPQELEQIRILAEEQV 272
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_005651651.1 (ribosomal protein L1 [Coccomyxa subellipsoidea C-169] >EIE27107.1 ribosomal protein L1 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32 Identity = 101/272 (37.13%), Postives = 148/272 (54.41%), Query Frame = 0 Query: 59 QASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERV-SPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVKKPIEPQEAVMQ 327 Q KAV ALL+H K QA K + L E LV +AL K P+ KP+ + LPH L+ D + VCLIVK+ + K+ + K+ VS+VVG+ +LRT Y + +R L A+DLFL D+R+LP L K LGKTFF KKK PI + + G +++ A + T+++ G C+ I+VA++SF N++ I+GA+ +P KW NV A+ +KT+ S ALP+YQ LP+ + I Q A ++ Sbjct: 11 QIRKAVAALLKHVEKQQA--------KANELLEEEELLYLVIIALKKTPQEARKDKPLRLPLPHSLY-----DFDGAEVCLIVKDHKGEGHKAAKQRVKEEKLAKVSKVVGVSKLRTKYESAEAKRALCTAYDLFLADERVLPSLPKLLGKTFFKKKKQPIPVDLTG---------KDWARQVRKATEATYMHHTGGTCINIRVARSSFSAEQCTENIVEAIKGALPHIPKKWNNVQALHVKTATSAALPIYQTLPEQPQRIEIPKQAAQVE 260
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_024383641.1 (ribosomal L1 domain-containing protein 1-like [Physcomitrella patens] >PNR49116.1 hypothetical protein PHYPA_011012 [Physcomitrella patens]) HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32 Identity = 104/268 (38.81%), Postives = 150/268 (55.97%), Query Frame = 0 Query: 54 RIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKEDDKAKVK----RALAVMKMEG--VSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 +++A+ +AV AL++ A A K+ K LL + YV+ V + K+P++ P + LPHPL+ + H VCLI+ + + AK K A A ++ EG +S+V+ L +L+TDY + +RKL ++D FL DDRIL L K LGKTFF KKKHPI + + + A +I AA T+LY + G C A+KVA+ S ++ NV A IEG + +P KW NV + LKT SV+LPLYQ LP +K Sbjct: 21 KVNAVLVERAVDALVKWCA------AQKQKEKAQLLEDDQLLYVV--VGMKKVPDKGRTNPYVLELPHPLY----QPDGNHEVCLIISDREHAKQKLDKQMAKARIEKEGLKISKVIPLSKLKTDYFAHEAKRKLCGSYDTFLADDRILGELPKLLGKTFFKKKKHPIPVNL---------TRAQWTGQISAALNSTYLYMSGGTCSAVKVARMSQARDEIVQNVNAVIEGIAQQIPKKWANVRSFFLKTLDSVSLPLYQSLPDMPLK 267
BLAST of NO11G02560 vs. NCBI_GenBank
Match: XP_002508838.1 (predicted protein, partial [Micromonas commoda] >ACO70096.1 predicted protein, partial [Micromonas commoda]) HSP 1 Score: 149.8 bits (377), Expect = 2.200e-32 Identity = 91/262 (34.73%), Postives = 147/262 (56.11%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEA-GDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLP 311 SR++ Q KAV AL +H K +A GK L + GDY V ++ ++P++ S K VP+++P+PL K + +CLIVK+ + + K+ +A M+ GV++V+G+ +LR +Y+ + +R+L D++DLF D R+LP+L K LGK+FF KKK P+ + + + +I A T+ + G C+ +KV + V N +A I+ V+ +P KW NV +I +KT+ SVALP+Y LP Sbjct: 1 SRVNPAQIKKAVAALAKHLEKVKAE------GKTQLFEEDGDGDYYSVMLSTRRVPQKGSNKLVPVKIPNPLLNPDKTE-----ICLIVKDHQGEGHKEAKKKVADMEACGVAKVLGISKLRNNYKPHEAKRQLCDSYDLFCADARVLPILPKLLGKSFFKKKKQPVPVDL---------TKKDWAAQIRKAAAATYAHMGAGTCIHVKVGTSGMEVTKVAENAIAAIDDLVQHVPRKWSNVQSIYMKTNESVALPVYNALP 242
BLAST of NO11G02560 vs. NCBI_GenBank
Match: GAQ84363.1 (Ribosomal protein L1p/L10e family [Klebsormidium nitens]) HSP 1 Score: 149.4 bits (376), Expect = 2.900e-32 Identity = 100/266 (37.59%), Postives = 145/266 (54.51%), Query Frame = 0 Query: 53 SRIDALQASKAVQALLQHYAKHQAAVASKKGGKQDLLASEAGDYVLVQVALAKIPERVSPKPVPIRLPHPLHGSGKDDEEEHAVCLIVKE---DDKAKVKRALAVMKMEGVSEVVGLQELRTDYREFQERRKLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPISLKIGGLLSSNPSSMATVGKRIIAAQQRTHLYRNHGNCLAIKVAKTSFPPAFVLANVLAGIEGAVEALPGKWKNVMAISLKTSASVALPLYQRLPQYLVK 316 S + Q +KAV ALL+ + KK K LL + D + ++L K P+R P I +PH L+ + VCL+VK+ + + + K +AV GVS+V+G+ +L+T Y+ ++ +R+L ++DLF+ DDRIL +L K LGKTFF KKKHPI + + G I A T+LY + G+C ++VA+ S P V+ NV+A EG + LP KW N+ A+ LKTS S ALPLY LP K Sbjct: 10 SELSKEQVTKAVTALLKW------VDSRKKQQKPQLLDDD--DMFHLVISLKKTPDREKTNPYRISIPHSLYPL----DAAREVCLLVKDVSGEGQKEAKHQIAVEAGTGVSKVIGVSKLKTKYKPYEAKRRLCGSYDLFVADDRILGVLPKLLGKTFFKKKKHPIPVTLKG---------KNWAGAIRKACDSTYLYVSGGSCSDVRVARISQEPQEVVENVVAAAEGISKILPKKWANIQALYLKTSESAALPLYNALPDTTAK 254 The following BLAST results are available for this feature:
BLAST of NO11G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02560 ID=NO11G02560|Name=NO11G02560|organism=Nannochloropsis oceanica|type=gene|length=3154bpback to top protein sequence of NO11G02560.1 >NO11G02560.1-protein ID=NO11G02560.1-protein|Name=NO11G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bpback to top Synonyms
Publications
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