NO11G02530, NO11G02530 (gene) Nannochloropsis oceanica

Overview
NameNO11G02530
Unique NameNO11G02530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1953
Alignment locationchr11:799687..801639 +

Link to JBrowse

Properties
Property NameValue
DescriptionRing zinc finger-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:799687..801639 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016528VPS11
IPR024763VPS11_C
Homology
BLAST of NO11G02530 vs. NCBI_GenBank
Match: EWM24929.1 (ring zinc finger-containing protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 389.4 bits (999), Expect = 1.900e-104
Identity = 273/462 (59.09%), Postives = 313/462 (67.75%), Query Frame = 0
Query:  101 PPSLPPSLDPKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLEQSCLAQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLNV 563
            P SL P+LD   RA AEDF H+F+D P WLR FLE     XXXXXXXXXXXXX    +   +A P+   +  PS   +V N LL+LL+ DWK+A                          G                                              AES+LLSFLE   GRY+EDQAL+LVQMHNF+PGQL L +++RQVE+VLE YME GEVGLVLQRM RKEN+KNA LW KVLAW+VGR      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    V+RVLQM+EREHVLPP +V++ LSQH  LPL V R ++ RLLKEA  D+ + Q  I SLRKST EKRAEV+DLR++ARLFQ+TTC +C+RPLELPAVHFLCMHSYHL+  CLAQEG+CNECAAD HHYERIQLKDQRGKA EHE FF+ELE+ GFAAVASYFGKGVLNV
Sbjct:    1 PLSLAPALD-APRASAEDFFHVFIDQPHWLRTFLEGVIREXXXXXXXXXXXXXXXLVSRGGYARPSPLPT--PSPPLLVGNTLLELLLLDWKQAVEDATARG----------------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 443          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_005854301.1 (ring zinc finger-containing protein [Nannochloropsis gaditana CCMP526] >EKU22062.1 ring zinc finger-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 258.8 bits (660), Expect = 3.800e-65
Identity = 127/169 (75.15%), Postives = 146/169 (86.39%), Query Frame = 0
Query:  394 VMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLEQSCLAQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLNV 563
            V+RVLQM+EREHVLPP +V++ LSQH  LPL V R ++ RLLKEA  D+ + Q  I SLRKST EKRAEV+DLR++ARLFQ+TTC +C+RPLELPAVHFLCMHSYHL+  CLAQEG+CNECAAD HHYERIQLKDQRGKA EHE FF+ELE+ GFAAVASYFGKGVLNV
Sbjct:   80 VVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 248          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_023690971.1 (vacuolar protein sorting-associated protein 11 homolog [Paramormyrops kingsleyae])

HSP 1 Score: 203.8 bits (517), Expect = 1.400e-48
Identity = 155/558 (27.78%), Postives = 249/558 (44.62%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPPSLD--PKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLE--QSCLAQEGKCNECAADHHH-YERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLN 562
            DVE A+ VLR AGY  HA+ +A K+  H+WYL+IQLE    +Y++AL YI  LPF  A   +  +G  L+H  P+ TT +L  LCT + P    +   SL+  P  +A +E F+ +F ++P+ LR FLE                                     P SS  V + LL+L +QDW                                                                   +  V   K  + A LS L++ +  +  D+ALVL QMHNFK G L L++K +  + ++ ++M+  E G V++   ++  ++ A LW + L    G   +KE                                   +  VLQ +ER +++PP LV+  L+ ++   L V++ +L   L+     +   ++KI   ++ TT+ R+E+++LR++A++FQ T C+ C  PLELP+VHFLC HS+H    +S    E +C  C  ++    + ++ +DQ+    +H        + GF+ VA YFG+GV N
Sbjct:  469 DVETAIRVLRQAGYHSHAVFLAEKHAHHEWYLKIQLE-DLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHVPDGTTLLLKGLCTDYQPRRDSADRDSLERAPGNKASSEMFIPIFANNPRELRAFLEHMIEVD-------------------------------PLSSQGVYDTLLELRLQDWAH-----------------------------------------------------------------EQDVEKKKVLQEAALSLLKSDNTVF--DKALVLCQMHNFKEGVLYLYEKGKLYQQIMHYHMQNEEYGQVVEAC-KRYGEQEACLWEQAL----GYFARKEE-----------------------------DCKPYISEVLQHIERHNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIGQYQQETTQLRSEIQELRTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPTCTPENRKVMDMLRAQDQKRDLHDHFARQLRCSNDGFSVVADYFGRGVFN 893          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: CBN79204.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 198.7 bits (504), Expect = 4.700e-47
Identity = 196/587 (33.39%), Postives = 269/587 (45.83%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSP-----------------PSLPPSLDPKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKK--------------ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLEQSCLAQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELED--QGFAAVASYFGKGVLNV 563
            DV  A+ VL++AG+ +HA E+AR++  HDW+LRIQLE+  P +  ALAYI+SLPF  A   L   G  L+ A PE+TTGVLMALCTG +   P                               AEDF+HL+VD P+WLR+FL                     GG     A PT            VA+ LL+LL+++W                                                        +                    E  +++ L+     YD D ALVLVQM NFKPGQL L++K    E+VLEHY++ G+   ++ R+ RKE   N  LW +VL+++V                    +     XXXXXXXXXXXXXXXXXXXXXXXX      V  +L ++ER+ VL P  V+ +LSQ++ LPL+V R FL R L  +             LR+ST + RAE++ LR+T    Q+++ +  R  +ELP   F+           L+  G       +      I+    R  A++HE FF  LE+   GF  VASYFGKGV+++
Sbjct:  634 DVATAIRVLKSAGHADHAAELARRHGEHDWFLRIQLERSQPDFSGALAYIASLPFSEASKQLRRRGKPLVAALPEDTTGVLMALCTGRYSSMPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEDFVHLYVDEPRWLRIFLTYVLR---------------EGGR----AGPT------------VADTLLELLLREW-------------------------------------------------------AAXXXXXXXXXXXXXXXXXXXXEDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTELVLEHYVDTGDTRNMI-RVCRKEGNNNPDLWVQVLSYLVNNVPSSGDIQESSPLPDNAGDGNPAGXXXXXXXXXXXXXXXXXXXXXXXXEGRWDDVRELLALMERDQVLSPLQVVSILSQNSQLPLWVTRDFLPRYLSTSAXXXXXXXXXXXXLRESTNKMRAEIQGLRATV---QSSSSSGSRVAMELPT--FMASELEKGGSKTLSSSG-LGGLGGEQAKIHDIKAAQAR-SALDHEQFFKGLEEAADGFGQVASYFGKGVMSM 1126          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: OQR92954.1 (vacuolar protein sorting-associated protein [Thraustotheca clavata])

HSP 1 Score: 197.2 bits (500), Expect = 1.400e-46
Identity = 170/569 (29.88%), Postives = 251/569 (44.11%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPS--------YRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPS-LPPSLDPKQRAPAE----DFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVL--PPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLEQSCLAQ-EGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELED--QGFAAVASYFGKGV 560
            DVE A+TVLR   YP+HAL +A+K+  H WYL+IQL++ S S          DAL YI  L F  A   L  +G  L+   P  TT +L  LCTG F  +  S   P       AP +    DFLHLFV H   LR FLE                        SV             S++ + N LL++++ D                                    +KS   P      L E + +     PT              +E+A+LS L+    +YDED AL+L+QMH  K G+  L+ K     M+L+H+ME GE   VL+ +   + + ++ LW   L +   R    +                                   + ++L +V+ +  L  PP  V+ +LSQ   +PL VVRP++   LK+  + +    ++I   ++ T + R+++  L S A +FQ T C  C   L+LP VHF+C HSYH  Q+C+++ E +C  CA +H H   ++ +    KA  HE FF++LE    GF  +A YFGKG+
Sbjct:  539 DVETALTVLR-ENYPQHALALAKKHNEHSWYLKIQLDRISDSLSDVEQARVADALEYIRGLSFAEADMNLRKYGRTLVTHLPGPTTELLKQLCTGRFSANTNSKSDPGKITLTCAPTKIALGDFLHLFVSHRAQLREFLEYIVQ------------------VESV-------------SNTSIGNTLLEMVLND-----------------------------------THKSTTDP--AGDELDEDHAVAEEPVPTQ-----------STSEAAVLSLLDNPRVKYDEDHALILMQMHGLKQGKRYLYQKLHMYHMLLQHHMEEGEDAAVLELV---KQQTDSNLWLLALRYFAERGPYPKN-------------------------GPNTDEWSELKQLLSLVDVQPSLQIPPLQVVSILSQSREIPLSVVRPYVVSQLKKDQAHIEADTEEIKKYKQDTQKMRSQMAALSSKAVVFQATKCDLCNHDLDLPVVHFMCGHSYH--QNCISETERECITCAPEHRHLLSLK-QSLEVKAGNHEQFFNQLETAADGFNTIAEYFGKGI 996          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_007258189.1 (vacuolar protein sorting-associated protein 11 homolog [Astyanax mexicanus])

HSP 1 Score: 196.4 bits (498), Expect = 2.300e-46
Identity = 152/558 (27.24%), Postives = 242/558 (43.37%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPPSLDPK--QRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLE--QSCLAQEGKCNECAADHHHY-ERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLN 562
            DVE A+ VLR AGY  HA+ +A K+  H+WYL+IQLE    +Y++AL YI  LPF  A   +  +G  L+H  PE TT +L  LCT + P    +   SLD     +A +E+F+ +F ++P+ LR FLE                                     PSS   V + LL+L +QDW                                                            P  K+ ++    SL   E+ +             D+ALVL QMHNFK G L L++K +  + ++ ++M+  E   V++   +    K   LW + L    G   +KE                                   +  VLQ +++ +++PP LV+  L+ ++   L V++ +L   L+     +   ++KI   R+ T   R+E+++LR++A++FQ T C+ C  PLELP+VHFLC HS+H    +S    E +C  C  ++    + ++ +DQ+    +H     +  + GF+ VA YFG+GV N
Sbjct:  469 DVEIAIKVLRQAGYHSHAVFLAEKHSHHEWYLKIQLE-DLKNYQEALRYIGRLPFEQAETNMKHYGKTLMHHVPESTTVLLKRLCTDYQPSKDSTDQDSLDRSMVDKANSEEFIPIFANNPRELRAFLEHMIKVE-------------------------------PSSPQGVYDTLLELRLQDWAH-------------------------------------------------------EQEPEKKKALQEAALSLLRRENTVF------------DKALVLCQMHNFKEGVLYLYEKGKLYQQIMHYHMQNEEYSKVVEAC-KTYGDKEVCLWEQAL----GYFARKEE-----------------------------DCKAYISEVLQHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEEDERKIRQYREETAHLRSEIQELRTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPTCTPENRKVKDMLRAQDQKRDLHDHFNRQLKSSNDGFSVVADYFGRGVFN 893          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_006822187.1 (PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Saccoglossus kowalevskii])

HSP 1 Score: 196.4 bits (498), Expect = 2.300e-46
Identity = 160/565 (28.32%), Postives = 251/565 (44.42%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPP-----SLDPK-QRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLEQSCL----AQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELE--DQGFAAVASYFGKGVLN 562
            DVE A+ V R A Y  HAL +A K+  HDWYL+IQLE     Y  AL YI  L F  A   L  +G  L++  P +TT +L  LCT + P   P + P     SL P+  +A AE+F+H+FV++   L  FLE                                     PS SS++ N LL+L + D                                 +++ K +                        +++V          E   L  L+    +YD DQALVL QMHNFK G L L++K +  + +L ++ME  E   ++    ++  +++ +LW + L++    AGK+E                                   +M VL  ++++++LPP LVI  L+ ++   L VV+ ++ R L+     +   ++ I   +  T + R+++++L+S+A++FQ + C+ C  PLELP+VHFLC HSYH  Q C       E +C  C +++     I    +  K + HE F  +L+    GF+ VA YFG+GV N
Sbjct:  466 DVETAIKVCRQASYYAHALFLAEKHGQHDWYLKIQLE-DIKDYTKALNYIGKLEFEEAESNLKKYGKILMNEVPHDTTELLKLLCTDYRPSDKPLVDPASMDGSLPPRINKAHAEEFIHIFVNNSSRLTEFLEHMVKVQ-------------------------------PSCSSLIYNTLLELHLHD---------------------------------VVHEKEI------------------------QKRVD--------IERKTLDLLQNTEAQYDIDQALVLCQMHNFKAGMLYLYEKAKLYQQILRYHMEHDEHIHIID-CCKRFGQQDPSLWVQALSYF---AGKEE------------------------------DCKPQIMEVLSHIDKKNLLPPLLVIQTLAHNSTATLSVVKDYIVRRLQLENDQIAEDERLIKQYKDETQKMRSQIEELKSSAKIFQVSKCSVCNHPLELPSVHFLCQHSYH--QHCFEGYAESESECPACMSENRKVLDIIRAQEHSKDL-HEQFHHQLDRATDGFSVVADYFGRGVFN 896          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: KPP60880.1 (vacuolar protein sorting-associated protein 11-like [Scleropages formosus])

HSP 1 Score: 196.1 bits (497), Expect = 3.000e-46
Identity = 152/558 (27.24%), Postives = 244/558 (43.73%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPPSLD--PKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLE--QSCLAQEGKCNECAADHHH-YERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLN 562
            DVE A+ VLR AGY  HA+ +A ++  H+WYL+IQLE    +Y++AL YI  LPF  A   +  +G  L+H  PE TT +L  LCT + P    +   SLD  P  +A +E+F+ +F ++P  LR FLE                                     P SS  V + LL+L +QDW                                                            P  K+ ++    SL  +++ +             D+ALVL QMH+FK G L L++K +  + ++ ++M+  E G V++   ++  ++   LW + L    G   +KE                                   +  VLQ +E+ +++PP LV+  L+ ++   L V++ +L   L+     +   ++KI   R+ T   RAE+++LR++A++FQ T C+ C  PLELP+VHFLC HS+H    +S    E +C  C   +    + ++ +DQ+    +H        + GF+ VA YFG+GV N
Sbjct:  478 DVEIAIKVLRQAGYHSHAVFLAERHAHHEWYLKIQLE-DLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHVPEGTTLLLKRLCTDYQPSRDSADRDSLDRMPGNKASSEEFIPIFANNPHELREFLEHMIEVE-------------------------------PRSSQGVYDTLLELRLQDWAH-------------------------------------------------------EQDPENKKILQEAALSLLKSDNTVF------------DKALVLCQMHSFKEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEAC-KRYGEQEVCLWEQAL----GYFARKEE-----------------------------DCKTYISEVLQHIEQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQYREETAHLRAEIQELRTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPTCTPGNRKVMDMLRAQDQKRDLHDHFTRQLRCSNDGFSVVADYFGRGVFN 902          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_018610531.1 (PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Scleropages formosus])

HSP 1 Score: 196.1 bits (497), Expect = 3.000e-46
Identity = 152/558 (27.24%), Postives = 244/558 (43.73%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPPSLD--PKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLE--QSCLAQEGKCNECAADHHH-YERIQLKDQRGKAMEHELFFSELEDQGFAAVASYFGKGVLN 562
            DVE A+ VLR AGY  HA+ +A ++  H+WYL+IQLE    +Y++AL YI  LPF  A   +  +G  L+H  PE TT +L  LCT + P    +   SLD  P  +A +E+F+ +F ++P  LR FLE                                     P SS  V + LL+L +QDW                                                            P  K+ ++    SL  +++ +             D+ALVL QMH+FK G L L++K +  + ++ ++M+  E G V++   ++  ++   LW + L    G   +KE                                   +  VLQ +E+ +++PP LV+  L+ ++   L V++ +L   L+     +   ++KI   R+ T   RAE+++LR++A++FQ T C+ C  PLELP+VHFLC HS+H    +S    E +C  C   +    + ++ +DQ+    +H        + GF+ VA YFG+GV N
Sbjct:  469 DVEIAIKVLRQAGYHSHAVFLAERHAHHEWYLKIQLE-DLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHVPEGTTLLLKRLCTDYQPSRDSADRDSLDRMPGNKASSEEFIPIFANNPHELREFLEHMIEVE-------------------------------PRSSQGVYDTLLELRLQDWAH-------------------------------------------------------EQDPENKKILQEAALSLLKSDNTVF------------DKALVLCQMHSFKEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEAC-KRYGEQEVCLWEQAL----GYFARKEE-----------------------------DCKTYISEVLQHIEQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQYREETAHLRAEIQELRTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPTCTPGNRKVMDMLRAQDQKRDLHDHFTRQLRCSNDGFSVVADYFGRGVFN 893          
BLAST of NO11G02530 vs. NCBI_GenBank
Match: XP_006642339.1 (PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Lepisosteus oculatus])

HSP 1 Score: 195.3 bits (495), Expect = 5.200e-46
Identity = 158/557 (28.37%), Postives = 247/557 (44.34%), Query Frame = 0
Query:    9 DVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPSYRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPSPPSLPPSLDPKQRAPAEDFLHLFVDHPKWLRLFLEXXXXXXXXXXXXXXXXXXLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAXXXXXXXXXXXXXXXXXXXXXXALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWVVGRAGKKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHLE--QSCLAQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSEL--EDQGFAAVASYFGKGVLN 562
            DVE A+ VLR AGY  HA+ +A K+  H+WYL+IQLE    +Y++AL YI  LPF  A   +  +G  L+H  PEETT +L  LCT + P    +   SL  K  A +E+F+ +F ++P  LR FLE                                     P S   V + LL+L +QDW                                                  E +  K S                 A + A L  L++ +  +  D+ALVL QMHNFK G L L++K +  + ++ ++M+  E   V++   ++  ++ A LW + L    G   +KE                                   + +VL  ++R +++PP LV+  L+ +++  L V++ +L   L+     +   ++KI   R+ T + R E+++L+++A++FQ T C+ C  PLELP+VHFLC HS+H    +S    E +C  C  D+     + L+ Q  K   HE F  +L   + GF+ VA YFG+GV N
Sbjct:  469 DVEIAIKVLRQAGYHSHAVFLAEKHEHHEWYLKIQLE-DLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHVPEETTLLLKGLCTDYQPRRDSADRDSLGSK--ANSEEFIPIFANNPHELRAFLEHMIEVE-------------------------------PRSPQGVYDTLLELRLQDWAH------------------------------------------------EQDPQKKS-----------------ALQDAALCLLKSDYTVF--DKALVLCQMHNFKEGVLYLYEKGKLYQQIMHYHMQNEEYAKVVEAC-KRYGEQEACLWEQAL----GYFARKEE-----------------------------DCKTYISQVLHHIDRNNLMPPLLVVQTLAHNSSATLSVIKDYLISKLQRESEQIEDDERKIRQYREDTAQLRTEIQELKNSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPTCTPDNRKVMDM-LRAQDQKRDLHENFARQLRCSNDGFSVVADYFGRGVFN 889          
The following BLAST results are available for this feature:
BLAST of NO11G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24929.11.900e-10459.09ring zinc finger-containing protein, partial [Nann... [more]
XP_005854301.13.800e-6575.15ring zinc finger-containing protein [Nannochlorops... [more]
XP_023690971.11.400e-4827.78vacuolar protein sorting-associated protein 11 hom... [more]
CBN79204.14.700e-4733.39conserved unknown protein [Ectocarpus siliculosus][more]
OQR92954.11.400e-4629.88vacuolar protein sorting-associated protein [Thrau... [more]
XP_007258189.12.300e-4627.24vacuolar protein sorting-associated protein 11 hom... [more]
XP_006822187.12.300e-4628.32PREDICTED: vacuolar protein sorting-associated pro... [more]
KPP60880.13.000e-4627.24vacuolar protein sorting-associated protein 11-lik... [more]
XP_018610531.13.000e-4627.24PREDICTED: vacuolar protein sorting-associated pro... [more]
XP_006642339.15.200e-4628.37PREDICTED: vacuolar protein sorting-associated pro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL112nonsL112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR020ngnoR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02530.1NO11G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100086g1gene5564Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02530.1NO11G02530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02530 ID=NO11G02530|Name=NO11G02530|organism=Nannochloropsis oceanica|type=gene|length=1953bp
ATGAGGATGAGGAGGGGAGGGGTGGACGTGGAGGCCGCTGTGACAGTGTT
GAGGGCGGCAGGATACCCGGAACATGCCTTGGAGGTGGCGAGGAAGTATC
Ggtgagtgcatccaatattcttcgtcttgccttcctccctccctctctcc
cttcctccctctccctcctccccctcctcaggcggtaccaatggatcatc
ccgtagatgataaagggaactccccccgttttccttctttcctctccctc
tctctcctttcctttttcctggcttcctactttcgatcctggggaaagtg
tcgcgtaaccattattttaccctccctccctccctccctcccttgcttcc
ttcctccctcctcagAGCCCATGACTGGTACCTTCGCATTCAACTTGAAA
AGCCCTCCCCCTCGTACCGTGACGCACTGGCCTACATATCCTCCCTCCCA
TTCCTCCCCGCCCGCCACTTCCTCTCCCTCCACGGCCACCGCCTCCTCCA
TGCCTACCCGGAGGAAACTACCGGCGTCCTCATGGCTCTCTGCACGGGGC
ACTTCCCTCCCTCCCCCCCCTCCCTCCCTCCTTCCCTCGACCCCAAGCAA
AGGGCACCGGCGGAAGACTTCCTCCACCTTTTTGTGGACCATCCGAAATG
GTTGCGGTTGTTTCTAGAATGCGTCATGCGTGAACCCCCTGCCCCTCCCT
CCCTCCCTCCCTCCCTCCCTTCCCTGTCGGGCGGTGCCTCGTCAGTCTTC
GCCTCGCCTACCCTCGCTTCCTCTTCCCTACCCTCCTCCTCGAGCGTCGT
GGCAAATGCGCTATTAGATCTGTTGATCCAAGATTGGAAGGAGGCGGCGG
CTGCTGCTGCTGCTGCTGCTGCTTCTGCTGCAGCCGCTCCTGTTCCTACT
CCTGCGTCATCAGCATTGAGCAACGGCACCAACATCATTAACAACAAGAG
CGTCCCCACCCCCTTCTCCCCTTCGTCTAGGCTCTCGGAAACGAACGGCA
TGAAGAGCAGCAGTGCGCCGACCATGAAAGAGCAGGTGAAGCACACTGTT
GCTTCCCTCAAGGCCGCTGAGTCCGCCCTCCTCTCCTTCCTCGAAACCTA
CCACGGACGGTACGATGAAGATCAGGCCCTCGTCCTGGTCCAGATGCACA
ACTTCAAGCCGGGACAGCTGCTTTTATTCGACAAGAGGCGACAGGTGGAG
ATGGTGTTGGAGCACTATATGGAGGCAGGGGAGGTTGGCCTGGTCCTGCA
GCGGATGGGAAGGAAGGAGAATAAAAAAAATGCTGCGCTGTGGGGGAAGG
TGCTGGCGTGGGTGGTGGGGAGGGCGGGGAAGAAGGAGAGGAAGGAGGGG
TCGGAAGAGAAGGAGAGTGACGACGAGGAGGTGGAGGACGACGAGGACGA
GGACGAGGAGGTGAGCGAGGACGAGGAGGCGGTGTGGGATGACGTGATGC
GGGTGCTACAGATGGTCGAAAGGGAGCACGTCCTCCCCCCGCACCTTGTC
ATTGACATGCTCTCCCAACACGCGAATCTTCCTTTATTCGTGGTCCGACC
TTTTCTGACACGTCTCTTAAAGGAGGCATACAGCGACGTCCACACCAGCC
AACAAAAGATCAATTCCCTTCGCAAAAGCACCACCGAAAAACGAGCCGAA
GTCAAGGATCTTCGCTCCACCGCGCGTCTCTTTCAAACAACCACCTGTAC
ATCCTGCCGGCGGCCATTGGAGCTCCCAGCTGTGCATTTTTTGTGCATGC
ATTCTTATCACTTGGAACAAAGCTGTTTAGCACAGGAGGGAAAGTGCAAT
GAGTGTGCGGCGGATCATCATCACTATGAACGGATCCAGTTGAAGGATCA
GAGAGGGAAGGCGATGGAGCATGAGCTGTTCTTCTCCGAGTTGGAAGACC
AGGGGTTTGCGGCGGTCGCATCATACTTTGGAAAAGGGGTGCTTAATGTT
TAG
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protein sequence of NO11G02530.1

>NO11G02530.1-protein ID=NO11G02530.1-protein|Name=NO11G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MRMRRGGVDVEAAVTVLRAAGYPEHALEVARKYRAHDWYLRIQLEKPSPS
YRDALAYISSLPFLPARHFLSLHGHRLLHAYPEETTGVLMALCTGHFPPS
PPSLPPSLDPKQRAPAEDFLHLFVDHPKWLRLFLECVMREPPAPPSLPPS
LPSLSGGASSVFASPTLASSSLPSSSSVVANALLDLLIQDWKEAAAAAAA
AAASAAAAPVPTPASSALSNGTNIINNKSVPTPFSPSSRLSETNGMKSSS
APTMKEQVKHTVASLKAAESALLSFLETYHGRYDEDQALVLVQMHNFKPG
QLLLFDKRRQVEMVLEHYMEAGEVGLVLQRMGRKENKKNAALWGKVLAWV
VGRAGKKERKEGSEEKESDDEEVEDDEDEDEEVSEDEEAVWDDVMRVLQM
VEREHVLPPHLVIDMLSQHANLPLFVVRPFLTRLLKEAYSDVHTSQQKIN
SLRKSTTEKRAEVKDLRSTARLFQTTTCTSCRRPLELPAVHFLCMHSYHL
EQSCLAQEGKCNECAADHHHYERIQLKDQRGKAMEHELFFSELEDQGFAA
VASYFGKGVLNV*
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Synonyms
Publications