NO11G02420, NO11G02420 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G02420
Unique Name	NO11G02420
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3526
Alignment location	chr11:767119..770644 -

Link to JBrowse

Properties


Property Name	Value
Description	Enhancer of mrna-decapping protein 4

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:767119..770644 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR032401	EDC4_WD40
IPR001680	WD40_repeat

Homology

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BLAST of NO11G02420 vs. NCBI_GenBank
Match: EWM24973.1 (enhancer of mrna-decapping protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 901.4 bits (2328), Expect = 2.800e-258
Identity = 612/1089 (56.20%), Postives = 708/1089 (65.01%), Query Frame = 0

Query:    1 MDNFNSFFQTLSRG-----ASTVTGPASGTTSAPAPAPGILGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGNGDGERASGTVAGMEVTTPAFTFSTPQGGLPHPQCTPIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHKKPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQDGKYIVTAGADGWARVWEVESKQAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTTLSPINTQSLTFVPPPPDRDVGKGGRAFHLEADESGEFLLLADAVRPLLYAAHVVLGPSSAKVDRLTPFQLKHPVLSLLSLPGVAIDAHEGQADKTGASEVQLFCVQTQAIQIYHLKPEDCLAGSGSTITAPASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITQAVAASLTEAKQTGGAQTTEEKGQVRSSREGRGLGSRNISAQRFATGGAGEESS---------------GVGGGVASGQASRDATSGMGPVAXXXXXXXXXXXXXXXXXXXXXGMPHRAAVASGETSGGISLAAASAATSATVNTEVVLAGLRDMEHRLGQLLTQNTKKAVADAIAGMDKKIEKSIKAALALQLGDVSGQVKEAALAGLGDAVKEPMGASFKQCFLETLLPAMQNTTQRMFAQINDSINKNLPGAVTAXXXXXXXXXXXXXXXXXXVKGEFRQVRSELASVANAVTVLSAQLAAWGSRLENGDDV--MDLGGGXXXXXXXXXXXXXXXXXXXAPVISATQKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPEVVAVGHPRLVKDFKRVQKAIQNLARGT 1068
            MDNFNSFFQTLSRG      S+  G  SG T APAP  G+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ASG VAGMEV TP+FTFSTPQ GLPHPQCTPIAFYNS+A YGSGRLIAVSDA+ICYAIKDGHIRGINRQ+VQRTLLKGHKKP+IDMAFA RSTC L SLGGDGSF+LWTI E+ ADKSLT+VPLL+VT V LQR+VWHP + H +AVVAP GE+ALINTQ LIQ+ GG+ G  A  +AAT GL DL PEW L+ A+N+CLDLSFS+DGKY+VTAG DGW RVWEVES+ AMGRWQPY GEPVSRALFLHRT G ++GEKVFVVTGGKQASE+KLFRAWTTLSPINTQ+LTF PPPPDRD G+G RAFHLE D++GEFLLLADA RPLLY AHVVLGPS+AKVDRLTP+QLKHPVLSL +L GV +DAHEG++ ++GASE+  +CVQTQAIQ YHL+P+DCL  S ST+    S                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     T +VAAS TE +QTGG  TTEEK           LG+ N        GG GE++                      AS   SR  + G                          G        SGE SG                      G  DME  +G+++++ TK+A+A+A                                AGLG AVK+P+ +SFKQCF + L+PAMQ+TTQRMFAQ+ + ++KN+  A  +                  VKG                              ENGD V        XXXXXXXXXXXXX      A ++   +KE++LRD++AG+ ++VFV+VLSSQDLDL LWLCSE+PKDDIFDSEPP+LSQPTMFCLLQQL+F LG+HT +KLEWMQELVLA+DP ++V+ SY+GEVCPELI+NFNEAAPEV A+GHP+LVKDFK VQKAIQNLARG+
Sbjct:    1 MDNFNSFFQTLSRGRAGNEKSSGGGETSGATQAPAPLQGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGIVAGMEVNTPSFTFSTPQDGLPHPQCTPIAFYNSEAPYGSGRLIAVSDAYICYAIKDGHIRGINRQTVQRTLLKGHKKPIIDMAFASRSTCMLGSLGGDGSFYLWTITESAADKSLTSVPLLAVTGVDLQRVVWHPKQVHMLAVVAPKGEIALINTQKLIQQRGGRVGDPAKVVAAT-GLADLMPEWCLT-AANQCLDLSFSKDGKYLVTAGEDGWVRVWEVESQVAMGRWQPYRGEPVSRALFLHRTGGPATGEKVFVVTGGKQASEIKLFRAWTTLSPINTQTLTFAPPPPDRDAGRGTRAFHLEVDQTGEFLLLADAARPLLYVAHVVLGPSTAKVDRLTPYQLKHPVLSLSALEGVGVDAHEGRSGRSGASEIHAYCVQTQAIQFYHLRPKDCLP-SASTLPNTGS------------------------------------ADATAPVGRSEPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLKAQSLASGSGRRAWEAASTHSVAASGTEERQTGGTHTTEEK----------ILGNAN-------AGGGGEDAGEXXXXXXXXXXXXXXXXXXXXASLPLSRSPSEGSSAT------------PVVSVHTPSSGRAPARRTLSGEGSGRKGAPEP--------------GGRADMEAGMGEVVSRRTKEAIAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLGQAVKDPISSSFKQCFQDMLIPAMQSTTQRMFAQMKEGLSKNI-AAARSDAGPGQGLNGAGAAALTEVKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGDTVGFXXXXXXXXXXXXXXXXXXXAVPAASASIVPGGRKEELLRDVRAGRFEDVFVSVLSSQDLDLLLWLCSEAPKDDIFDSEPPMLSQPTMFCLLQQLTFQLGKHTAQKLEWMQELVLAVDPKDAVIGSYLGEVCPELIRNFNEAAPEVAALGHPQLVKDFKMVQKAIQNLARGS 1006

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BLAST of NO11G02420 vs. NCBI_GenBank
Match: XP_009524080.1 (hypothetical protein PHYSODRAFT_262909 [Phytophthora sojae] >EGZ21363.1 hypothetical protein PHYSODRAFT_262909 [Phytophthora sojae])

HSP 1 Score: 149.8 bits (377), Expect = 4.700e-32
Identity = 122/392 (31.12%), Postives = 190/392 (48.47%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEADESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   NG V  I   T +   G             + L D+         S +  D++FS  +G+ +VTAG+DG  +V+ V+ +      + + R++P+ GE V+    LH   G+ S +    + GG+  + + L+ A  T   +P+  Q++T      D              D +  FL +AD  +PL+YA H  L PSS      + D +T F L +PVLS  LL+  G +  A +G AD   A       +QL+C+QTQAIQ YH+   DC
Sbjct:  280 PITLYNSERASQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVSELAFFNSKSDLLLSAGSDHHVAIWAIQNDPMSRE-----LVKLVPTQAQRVKWHPSDSNKIAIA--NGSVVFIADLTDVDADG----------TGAENLYDMSV--VCGQTSGQINDMAFSPGNGECVVTAGSDGLVQVYRVQGRLPGQPAEFIQRFEPFRGEEVNS---LHFYGGNFSNQPGLFI-GGEANTRLSLWNAALTENTTPVCYQTVTI----RDETQEDSELIHETILDPTTHFLFVADRAKPLVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRTGQSQSARDG-ADFASALGGLNFSMQLYCLQTQAIQRYHVAASDC 641

HSP 2 Score: 60.8 bits (146), Expect = 2.900e-5
Identity = 34/113 (30.09%), Postives = 53/113 (46.90%), Query Frame = 0

Query:  928 TQKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPE 1041
            TQK  +L  L     +E F   L +Q ++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L ++  +  +  ++  V  EL    N    E
Sbjct: 1039 TQKGTVLDYLARNDWEEAFKFALGAQSVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLADDLETKLNWLRESLLVMNIRDQSIAGFVTSVLQELQTGLNSVPAE 1151

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BLAST of NO11G02420 vs. NCBI_GenBank
Match: XP_002908587.1 (enhancer of mRNA-decapping protein, putative [Phytophthora infestans T30-4] >EEY61670.1 enhancer of mRNA-decapping protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 149.4 bits (376), Expect = 6.200e-32
Identity = 118/395 (29.87%), Postives = 196/395 (49.62%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSV----ASNRCLDLSFS-QDGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEADESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGAS----EVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+ +   G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   NG V LI   + +   G              G D+L   + +SV     S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T      D  +           D + +FL +AD  +PL+YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G    +        +QL+C+QTQAIQ YH+  ++C
Sbjct:  230 PITLYNSERISQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFSSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--NGSVVLIADLSGVDADG-------------SGADNL---YDISVVCGQTSGQINDMAFSLGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFNGEAVNSLHFY----GGNFLNQPGLLIGGEANTQLSLWNAALTENTPPVCYQTVTL----RDETLTDSSLIHETILDPTTQFLFVADRSKPLVYAFH--LAPSSDARTPRRFDNVTDFALAYPVLSMGLLNRTSQSQPARDGSGVSSPLGGLNFTMQLYCLQTQAIQRYHVGAKEC 591

HSP 2 Score: 62.4 bits (150), Expect = 9.900e-6
Identity = 34/112 (30.36%), Postives = 53/112 (47.32%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPE 1041
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E
Sbjct:  984 QKNTVLDCLSQNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPAE 1095

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BLAST of NO11G02420 vs. NCBI_GenBank
Match: XP_020990878.1 (enhancer of mRNA-decapping protein 4 [Arachis duranensis])

HSP 1 Score: 147.9 bits (372), Expect = 1.800e-31
Identity = 124/403 (30.77%), Postives = 177/403 (43.92%), Query Frame = 0

Query:  106 PHPQCTPIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHKKPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKS--------LTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLG-GKPGGVAPTLAA--TKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESKQAMGRWQPYGGEPVSRALFL---HRTKGSSSGEKVFVVTGGKQASEVKLF-----RAWTTLSPINTQSLTFVPPPPDRDVG----KGGRAFHLEADESGEFLLLADAVRPLLYAAHVVLG--PSSAKVDRLTPFQLKHPVLSLLSLPGVAIDAHEGQADKTGASEVQLFCVQTQAIQIYHLKPEDCL 483
            P  +  PI  Y SD     GR IAV+ ++ICY +K G+IR +N  +  R+LLKGH + V D+AF       LAS+G DG  F+W I E P D+         +  + ++    V   RI WH  K   + ++     V  I+T     K+G G+      TL     K +D +Q    +        DLS  Q     +V+A  DG  ++WE    Q +   +P+ G PV  A F    HR       + + ++TGG Q  EVKL+       W  L P + +S         R       K      + A      LLLA+A R  +YA H+  G  P S ++D +  F +  P+LS      +            G   VQ++CVQTQAIQ Y L    CL
Sbjct:   47 PQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHK-QEILIIGMGRHVLRIDT----TKVGNGEAFVTEDTLRCPLDKLIDGVQ---LVGTHDGEVTDLSMCQWMRNRLVSASHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRP------DHIVLITGGPQNREVKLWVSASEEGW--LLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDIL---------PHGEHIVQVYCVQTQAIQQYALDLAQCL 424

HSP 2 Score: 66.6 bits (161), Expect = 5.200e-7
Identity = 62/315 (19.68%), Postives = 124/315 (39.37%), Query Frame = 0

Query:  722 ATVNTEVVLAGLRDMEHRLGQLLTQNTKKAVAD-AIAGMDKKIEKSIKAALALQLGDVSGQVKEAALAGLGDAVKEPMGASFKQCFLETLLPAMQNTTQRMFAQINDSINKNLPGAVTAXXXXXXXXXXXXXXXXXXVKGEFRQVRSELASVANAVTVLSAQLAAWGSRLENGDDVMDLGGGXXXXXXXXXXXXXXXXXXXAPVISATQKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFN 1036
            A+V    V A    +E  +   + ++ ++ V D A+  +DK +   ++A +A Q+        +A     G   K+ +  S K  F  +++PA + + + MF Q++ +  K +    TA                         +R  + S ++    LS ++     +L         G                        +    K+++ R +   K +E F   L   D+ +  WLCS+     +    P  L+Q  +  LLQQL+  +   T +K+ WM ++  AI+PS+ ++  ++  +  ++ Q  N
Sbjct:  896 ASVGPAAVHAMTPTIEKIISSAIVESFQRGVGDKAVNQLDKSVNAKLEATVARQI--------QAQFQTTG---KQVLQDSLKSSFEISVVPAFEKSCKAMFDQVDSTFQKGMVEHSTAVQQRLESGHTSLA----------MTLRESINSASSVTQTLSREVLEGQRKLM---AYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDPKQELARLITERKFEEAFTGALKRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQLACDINNDTSRKIAWMMDVAAAINPSDPMIAMHVRPIFEQVYQMLN 1186

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: XP_015931799.2 (enhancer of mRNA-decapping protein 4-like [Arachis duranensis])

HSP 1 Score: 147.9 bits (372), Expect = 1.800e-31
Identity = 124/403 (30.77%), Postives = 177/403 (43.92%), Query Frame = 0

Query:  106 PHPQCTPIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHKKPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKS--------LTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLG-GKPGGVAPTLAA--TKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESKQAMGRWQPYGGEPVSRALFL---HRTKGSSSGEKVFVVTGGKQASEVKLF-----RAWTTLSPINTQSLTFVPPPPDRDVG----KGGRAFHLEADESGEFLLLADAVRPLLYAAHVVLG--PSSAKVDRLTPFQLKHPVLSLLSLPGVAIDAHEGQADKTGASEVQLFCVQTQAIQIYHLKPEDCL 483
            P  +  PI  Y SD     GR IAV+ ++ICY +K G+IR +N  +  R+LLKGH + V D+AF       LAS+G DG  F+W I E P D+         +  + ++    V   RI WH  K   + ++     V  I+T     K+G G+      TL     K +D +Q    +        DLS  Q     +V+A  DG  ++WE    Q +   +P+ G PV  A F    HR       + + ++TGG Q  EVKL+       W  L P + +S         R       K      + A      LLLA+A R  +YA H+  G  P S ++D +  F +  P+LS      +            G   VQ++CVQTQAIQ Y L    CL
Sbjct:   91 PQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHK-QEILIIGMGRHVLRIDT----TKVGNGEAFVTEDTLRCPLDKLIDGVQ---LVGTHDGEVTDLSMCQWMRNRLVSASHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRP------DHIVLITGGPQNREVKLWVSASEEGW--LLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDIL---------PHGEHIVQVYCVQTQAIQQYALDLAQCL 468

HSP 2 Score: 64.3 bits (155), Expect = 2.600e-6
Identity = 62/315 (19.68%), Postives = 123/315 (39.05%), Query Frame = 0

Query:  722 ATVNTEVVLAGLRDMEHRLGQLLTQNTKKAVAD-AIAGMDKKIEKSIKAALALQLGDVSGQVKEAALAGLGDAVKEPMGASFKQCFLETLLPAMQNTTQRMFAQINDSINKNLPGAVTAXXXXXXXXXXXXXXXXXXVKGEFRQVRSELASVANAVTVLSAQLAAWGSRLENGDDVMDLGGGXXXXXXXXXXXXXXXXXXXAPVISATQKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFN 1036
            A+V    V A    +E  +   +  + ++ V D A+  +DK +   ++A +A Q   +  Q +      L DA+        K  F  +++PA + + + MF Q++ +  K   G V                    ++       S   +++  V     +L A+ +   N   +  L                         +    K+++ R +   K +E F   L   D+ +  WLCS+     +    P  L+Q  +  LLQQL+  +   T +K+ WM ++  AI+PS+ ++  ++  +  ++ Q  N
Sbjct:  940 ASVGPAAVRAMTPTIEKIISSAIVDSFQRGVGDKAVNQLDKSVNAKLEATVARQ---IQAQFQTTGKQVLQDAL--------KSSFEISVVPAFEKSCKAMFDQVDSTFQK---GMVEHSTSVQQRLESGHTSLAMTLRESINSASSVTQTLSREVLEGQRKLMAYATAGANSGTLNPL----------PIQLNNGPLLREKVEVPLDPKQELARLIAERKFEEAFTGALQRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQLACDINNDTSRKIAWMTDVAAAINPSDPMIAMHVRPIFEQVYQILN 1230

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: ETI56004.1 (hypothetical protein F443_01376, partial [Phytophthora parasitica P1569])

HSP 1 Score: 147.5 bits (371), Expect = 2.300e-31
Identity = 119/394 (30.20%), Postives = 197/394 (50.00%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEA--DESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   +G V LI   + +   G             + L D+         S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T       RD  +G  +   E   D + +FL +AD  +P++YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G +D T A       +QL+C+QTQAIQ YH+   +C
Sbjct:  272 PITLYNSERTSQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFNSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--SGSVVLIADLSDVDADG----------TGAENLYDISV--VCGQTSGQINDMAFSPGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFSGEAVNSLHFY----GGNFLNQPGLLIGGEANTKLSLWNAALTENTPPVCYQTVTL------RDETRGDSSLIHETILDPTTQFLFVADRSKPVVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRSSQSQPARDG-SDVTSALGGLNFTMQLYCLQTQAIQRYHVGAREC 633

HSP 2 Score: 62.0 bits (149), Expect = 1.300e-5
Identity = 34/112 (30.36%), Postives = 53/112 (47.32%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPE 1041
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E
Sbjct: 1026 QKNTVLDCLSRNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPME 1137

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: ETK95816.1 (hypothetical protein L915_01307, partial [Phytophthora parasitica] >ETL49199.1 hypothetical protein L916_01287, partial [Phytophthora parasitica])

HSP 1 Score: 147.5 bits (371), Expect = 2.300e-31
Identity = 119/394 (30.20%), Postives = 197/394 (50.00%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEA--DESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   +G V LI   + +   G             + L D+         S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T       RD  +G  +   E   D + +FL +AD  +P++YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G +D T A       +QL+C+QTQAIQ YH+   +C
Sbjct:  272 PITLYNSERTSQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFNSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--SGSVVLIADLSDVDADG----------TGAENLYDISV--VCGQTSGQINDMAFSPGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFSGEAVNSLHFY----GGNFLNQPGLLIGGEANTKLSLWNAALTENTPPVCYQTVTL------RDETRGDSSLIHETILDPTTQFLFVADRSKPVVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRSSQSQPARDG-SDVTSALGGLNFTMQLYCLQTQAIQRYHVGAREC 633

HSP 2 Score: 62.0 bits (149), Expect = 1.300e-5
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPEV 1042
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E+
Sbjct: 1026 QKNTVLDCLSRNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPMEL 1138

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: ETM02253.1 (hypothetical protein L917_01267, partial [Phytophthora parasitica])

HSP 1 Score: 147.5 bits (371), Expect = 2.300e-31
Identity = 119/394 (30.20%), Postives = 197/394 (50.00%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEA--DESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   +G V LI   + +   G             + L D+         S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T       RD  +G  +   E   D + +FL +AD  +P++YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G +D T A       +QL+C+QTQAIQ YH+   +C
Sbjct:  272 PITLYNSERTSQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFNSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--SGSVVLIADLSDVDADG----------TGAENLYDISV--VCGQTSGQINDMAFSPGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFSGEAVNSLHFY----GGNFLNQPGLLIGGEANTKLSLWNAALTENTPPVCYQTVTL------RDETRGDSSLIHETILDPTTQFLFVADRSKPVVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRSSQSQPARDG-SDVTSALGGLNFTMQLYCLQTQAIQRYHVGAREC 633

HSP 2 Score: 62.0 bits (149), Expect = 1.300e-5
Identity = 34/112 (30.36%), Postives = 53/112 (47.32%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPE 1041
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E
Sbjct: 1026 QKNTVLDCLSRNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPME 1137

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: ETM55498.1 (hypothetical protein L914_01296, partial [Phytophthora parasitica])

HSP 1 Score: 147.5 bits (371), Expect = 2.300e-31
Identity = 119/394 (30.20%), Postives = 197/394 (50.00%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEA--DESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   +G V LI   + +   G             + L D+         S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T       RD  +G  +   E   D + +FL +AD  +P++YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G +D T A       +QL+C+QTQAIQ YH+   +C
Sbjct:  272 PITLYNSERTSQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFNSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--SGSVVLIADLSDVDADG----------TGAENLYDISV--VCGQTSGQINDMAFSPGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFSGEAVNSLHFY----GGNFLNQPGLLIGGEANTKLSLWNAALTENTPPVCYQTVTL------RDETRGDSSLIHETILDPTTQFLFVADRSKPVVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRSSQSQPARDG-SDVTSALGGLNFTMQLYCLQTQAIQRYHVGAREC 633

HSP 2 Score: 62.0 bits (149), Expect = 1.300e-5
Identity = 34/112 (30.36%), Postives = 53/112 (47.32%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPE 1041
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E
Sbjct: 1026 QKNTVLDCLSRNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPME 1137

[Close]

BLAST of NO11G02420 vs. NCBI_GenBank
Match: ETP25819.1 (hypothetical protein F441_01353, partial [Phytophthora parasitica CJ01A1] >ETP53832.1 hypothetical protein F442_01314, partial [Phytophthora parasitica P10297])

HSP 1 Score: 147.5 bits (371), Expect = 2.300e-31
Identity = 119/394 (30.20%), Postives = 197/394 (50.00%), Query Frame = 0

Query:  112 PIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQSVQRTLLKGHK-KPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSLTTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGKPGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQ-DGKYIVTAGADGWARVWEVESK------QAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQASEVKLFRAWTT--LSPINTQSLTFVPPPPDRDVGKGGRAFHLEA--DESGEFLLLADAVRPLLYAAHVVLGPSS-----AKVDRLTPFQLKHPVLS--LLSLPGVAIDAHEGQADKTGA-----SEVQLFCVQTQAIQIYHLKPEDC 482
            PI  YNS+     G LI+V++ FI Y I++G IR I++ SV R LL+ H+   V ++AF    +  L S G D    +W I  +P  +      L+ +     QR+ WHP+  + +A+   +G V LI   + +   G             + L D+         S +  D++FS  +G+ +VTAG+DG+ +V+ V+ +      + + R++P+ GE V+   F     G +   +  ++ GG+  +++ L+ A  T    P+  Q++T       RD  +G  +   E   D + +FL +AD  +P++YA H  L PSS      + D +T F L +PVLS  LL+    +  A +G +D T A       +QL+C+QTQAIQ YH+   +C
Sbjct:  272 PITLYNSERTSQLGNLISVNEHFISYPIRNGLIRVISQSSVDRLLLRKHEHHAVTELAFFNSKSDLLLSSGTDHHIAIWAIQNDPMSRE-----LIKLVPTQAQRVKWHPSDSNKIAIA--SGSVVLIADLSDVDADG----------TGAENLYDISV--VCGQTSGQINDMAFSPGNGECVVTAGSDGFVQVYRVQDRLPGQPAEFIQRFEPFSGEAVNSLHFY----GGNFLNQPGLLIGGEANTKLSLWNAALTENTPPVCYQTVTL------RDETRGDSSLIHETILDPTTQFLFVADRSKPVVYAFH--LAPSSDARTPRRFDNVTEFALAYPVLSMGLLNRSSQSQPARDG-SDVTSALGGLNFTMQLYCLQTQAIQRYHVGAREC 633

HSP 2 Score: 62.0 bits (149), Expect = 1.300e-5
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0

Query:  929 QKEKMLRDLKAGKIDEVFVNVLSSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEKKLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPEV 1042
            QK  +L  L     +E F   L +Q+++L  + C +     +  S PP LSQ  + CL+QQL   L    E KL W++E +L +D  +  +  ++  V  EL    N    E+
Sbjct: 1026 QKNTVLDCLSRNDWEEAFKFALGAQNVNLVAFTCQQCDPRLVLSSRPPKLSQMLILCLVQQLGADLVDDLETKLNWLRESLLVMDVRDQTIAGFVTSVLQELQTGLNSVPMEL 1138

The following BLAST results are available for this feature:

BLAST of NO11G02420 vs. NCBI_GenBank

BLAST of NO11G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24973.1	2.800e-258	56.20	enhancer of mrna-decapping protein 4 [Nannochlorop...	[more]
XP_009524080.1	4.700e-32	31.12	hypothetical protein PHYSODRAFT_262909 [Phytophtho...	[more]
XP_002908587.1	6.200e-32	29.87	enhancer of mRNA-decapping protein, putative [Phyt...	[more]
XP_020990878.1	1.800e-31	30.77	enhancer of mRNA-decapping protein 4 [Arachis dura...	[more]
XP_015931799.2	1.800e-31	30.77	enhancer of mRNA-decapping protein 4-like [Arachis...	[more]
ETI56004.1	2.300e-31	30.20	hypothetical protein F443_01376, partial [Phytopht...	[more]
ETK95816.1	2.300e-31	30.20	hypothetical protein L915_01307, partial [Phytopht...	[more]
ETM02253.1	2.300e-31	30.20	hypothetical protein L917_01267, partial [Phytopht...	[more]
ETM55498.1	2.300e-31	30.20	hypothetical protein L914_01296, partial [Phytopht...	[more]
ETP25819.1	2.300e-31	30.20	hypothetical protein F441_01353, partial [Phytopht...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL115	nonsL115	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR010	ncniR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002013	NSK002013	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G02420.1	NO11G02420.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591513	gene_5137	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100186g5	gene5523	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G02420.1	NO11G02420.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G02420 ID=NO11G02420|Name=NO11G02420|organism=Nannochloropsis oceanica|type=gene|length=3526bp
AGCGCGCACTTGGCTTGCCTGCTGTCGGATCTGCCTGCCTAAAAAGAAGG
ACTTGTTTGGGGTTGGGGGCGACTCTCTAGCTTGGCCTGTGGATAAGGTA
GCACACACCACTTCTACCGCGCGCCACCTAGAAGCACGATGGACAATTTC
AACTCCTTCTTCCAGACCCTGTCGCGCGGTGCGTCGACGGTTACGGGTCC
TGCATCTGGCACCACGTCTGCCCCGGCGCCTGCGCCGGGCATCCTTGGGA
CTGCGGTGACGACGACCACCACTCAGAGGAACTCGACCAGCAGCACGGCG
GCCGCGTCTCCTTCTTCTTCCTCAGTATCCTCTCTCTCCTCATCAATCTC
GTCCATTCCGGGAAATGGAGACGGGGAACGGGCTTCAGGTACGGTTGCCG
GTATGGAAGTGACGACTCCGGCCTTCACATTCTCAACGCCGCAGGGGGGG
CTGCCTCACCCGCAGTGTACGCCCATTGCCTTTTATAATTCAGACGCACT
CTATGGGAGTGGACGTCTTATTGCCGTGTCGGATGCGTTCATTTGCTACG
CCATCAAGGATGGGCACATTCGCGGGATCAATCGCCAGTCGGTGCAACGC
ACTCTGCTGAAAGGACACAAGAAGCCGGTGATCGATATGGCTTTTGCGCG
TCGCTCCACCTGCACCCTGGCATCTTTAGGTGGGGATGGATCATTTTTCT
TGTGGACCATCGGCGAGAACCCTGCAGATAAGTCTCTGACCACCGTCCCT
CTCCTGAGCGTGACCAACGTTCACTTGCAGCGAATCGTCTGGCACCCCAC
CAAGCCTCACACCGTTGCCGTCGTCGCCCCAAACGGCGAAGTTGCCTTGA
TCAATACTCAAACATTGATCCAAAAGCTGGGCGGGAAACCGGGGGGGGTT
GCACCGACGCTAGCGGCTACGAAGGGATTAGATGATTTGCAGCCCGAGTG
GAAGCTCTCGGTAGCGAGCAACCGATGCCTAGACCTGAGCTTTTCACAGG
ACGGAAAATATATAGTAACGGCGGGGGCAGATGGCTGGGCAAGGGTGTGG
GAAGTGGAGTCGAAGCAGGCCATGGGGAGATGGCAGCCTTATGGAGGGGA
GCCGGTATCTAGGGCATTGTTTCTGCATCGGACCAAGGGATCATCGTCGG
GCGAGAAGGTCTTCGTGGTCACGGGGGGAAAGCAAGCGAGTGAAGTGAAG
CTGTTTAGGGCGTGGACGACGCTGTCGCCGATCAATACCCAGAGCTTGAC
GTTTGTCCCGCCGCCGCCTGATCGGGATGTTGGGAAAGGCGGGAGGGCGT
TCCACCTGGAAGCGGACGAGTCGGGCGAGTTTTTGCTCTTGGCGGATGCC
GTACGGCCCTTGTTGTACGCGGCACACGTGGTCCTGGGTCCGAGCAGTGC
CAAGGTGGATAGATTGACCCCCTTCCAATTAAAGCACCCGGTCTTGAGCT
TGTTGTCGTTGCCAGGAGTGGCGATAGATGCCCACGAGGGACAAGCAGAC
AAGACGGGCGCCTCGGAAGTGCAGCTCTTCTGTGTGCAAACCCAAGCTAT
ACAAATCTACCATTTGAAGCCTGAAGATTGCCTCGCCGGCAGTGGCAGCA
CTATCACAGCCCCTGCCTCCCTCCCTTCTACTACCGCTGCTGCTGCTGCT
CCTGCCCCTGCTCCTACTACTTCTGCTCGATTCTCGCACCAGACAACAGC
CGCCCCCCCTTCTGGCCAATCACCTGCCATCCTGCAGATGCTCCTGCAAG
CTAGTCAAGCCGCAGGCAGCAGCGGCAACAACACCACCACCGGCAGCAGC
AGCGCGCCTGGGTTACTCGCCTCGAAGTCTCTGACAGCGTCGGCTGCGTC
CAACGGGCGACGCGCAGCAGCTGGCGGTGATGGTGAAGAAGAAAAGGGAG
GACGCGGAGAAGAAGCTGGCATTACCCAAGCAGTTGCTGCCTCCTTGACA
GAAGCGAAGCAAACGGGTGGGGCGCAGACCACGGAAGAAAAAGGGCAAGT
TCGGAGCTCTAGGGAAGGGCGGGGGTTGGGGAGCCGAAATATATCTGCGC
AGCGATTCGCGACCGGCGGCGCTGGAGAGGAGAGTAGTGGAGTGGGTGGT
GGAGTTGCCTCGGGGCAAGCAAGTCGAGATGCTACAAGTGGCATGGGTCC
GGTGGCAACTGTCTCGCCTTCGGAGCCTGCTTCTCCTTCCGTTCCTTCTC
CCCCTCCTCCTCCTTCCTCGGGCATGCCTCACCGAGCCGCTGTGGCATCA
GGAGAAACAAGTGGAGGCATAAGCCTCGCGGCCGCATCAGCAGCAACATC
GGCAACGGTCAACACGGAAGTGGTCTTGGCGGGCTTACGAGACATGGAGC
ACCGTTTAGGTCAACTGCTCACTCAAAACACCAAAAAGGCAGTGGCCGAT
GCAATCGCAGGAATGGACAAAAAAATAGAGAAATCAATCAAAGCTGCTCT
GGCCTTGCAGCTGGGCGACGTATCGGGCCAGGTAAAGGAGGCTGCTCTTG
CGGGGCTAGGGGACGCGGTGAAGGAGCCTATGGGTGCGTCGTTCAAGCAA
TGCTTTCTAGAAACGCTTTTGCCTGCCATGCAAAATACCACCCAGAGAAT
GTTTGCACAAATCAATGACAGCATTAACAAGAATCTACCCGGAGCTGTAA
CCGCGGCTGTTGCTGCTTCGGGTGGAGGAGGTACTGCAGGTTTGACTGGT
TTGACCGAGGTCAAGGGGGAGTTCAGGCAGGTCCGAAGTGAGCTGGCTTC
CGTTGCGAATGCAGTGACTGTCTTGTCTGCGCAGCTTGCAGCTTGGGGTA
GCCGGTTGGAGAATGGGGACGATGTGATGGATTTGGGGGGAGGCTTGGGA
GGAGGCGCGTGGCGGGGCAAAGCAGCCCCGGCAGCAGCGCCTGCCCCGGC
TGCGCCTGTGATTTCGGCCACGCAAAAGGAGAAGATGCTCAGGGATTTGA
AGGCGGGGAAGATTGATGAGGTGTTTGTCAATGTCCTATCGTCGCAGGAC
CTGGACTTGTCGTTGTGGCTATGTTCAGAGTCGCCCAAGGACGATATTTT
CGATTCGGAACCGCCCTTGCTCTCGCAGCCGACCATGTTCTGCCTTTTGC
AACAATTGTCTTTTCATCTAGGACAGCACACTGAAAAAAAGTTGGAATGG
ATGCAGGAGCTGGTCTTGGCTATCGATCCCAGTAATTCTGTGGTCAAATC
GTATATTGGGGAGGTCTGCCCGGAGTTGATCCAAAATTTCAATGAGGCGG
CACCGGAGGTGGTGGCAGTGGGACACCCTCGACTGGTGAAGGACTTTAAG
AGGGTTCAGAAGGCGATTCAGAATTTAGCACGTGGCACTTAGAGGAAATG
AGGGAGGACGGGTAGGATGAGGGTAGAGAGGGAGACGAGAGGTGTAGGAA
AGACGAGTTTAAAGTAAGCCGTAAAGGAAGGAAAGCAAGCAAGCAAGAAA
GAAAGAAAGAAAGAAAGAGGAAAGATTACTGGCATAAATTCTCTATCTTA
GTGGGGTCCTCAAGAGTGTCGCTTTG

protein sequence of NO11G02420.1

>NO11G02420.1-protein ID=NO11G02420.1-protein|Name=NO11G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1068bp
MDNFNSFFQTLSRGASTVTGPASGTTSAPAPAPGILGTAVTTTTTQRNST
SSTAAASPSSSSVSSLSSSISSIPGNGDGERASGTVAGMEVTTPAFTFST
PQGGLPHPQCTPIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQ
SVQRTLLKGHKKPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSL
TTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGK
PGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQDGKYIVTAGADGW
ARVWEVESKQAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQA
SEVKLFRAWTTLSPINTQSLTFVPPPPDRDVGKGGRAFHLEADESGEFLL
LADAVRPLLYAAHVVLGPSSAKVDRLTPFQLKHPVLSLLSLPGVAIDAHE
GQADKTGASEVQLFCVQTQAIQIYHLKPEDCLAGSGSTITAPASLPSTTA
AAAAPAPAPTTSARFSHQTTAAPPSGQSPAILQMLLQASQAAGSSGNNTT
TGSSSAPGLLASKSLTASAASNGRRAAAGGDGEEEKGGRGEEAGITQAVA
ASLTEAKQTGGAQTTEEKGQVRSSREGRGLGSRNISAQRFATGGAGEESS
GVGGGVASGQASRDATSGMGPVATVSPSEPASPSVPSPPPPPSSGMPHRA
AVASGETSGGISLAAASAATSATVNTEVVLAGLRDMEHRLGQLLTQNTKK
AVADAIAGMDKKIEKSIKAALALQLGDVSGQVKEAALAGLGDAVKEPMGA
SFKQCFLETLLPAMQNTTQRMFAQINDSINKNLPGAVTAAVAASGGGGTA
GLTGLTEVKGEFRQVRSELASVANAVTVLSAQLAAWGSRLENGDDVMDLG
GGLGGGAWRGKAAPAAAPAPAAPVISATQKEKMLRDLKAGKIDEVFVNVL
SSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEK
KLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPEVVAVGHPRLV
KDFKRVQKAIQNLARGT*

Synonyms

Publications