NO11G02400, NO11G02400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02400 vs. NCBI_GenBank
Match: XP_005853437.1 (transport protein particle bet3 containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU22923.1 transport protein particle bet3 containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.5 bits (807), Expect = 1.200e-82 Identity = 160/183 (87.43%), Postives = 168/183 (91.80%), Query Frame = 0 Query: 1 MVADLPKQPSS----QQGKKAEYAESLFDYLFAAMIDTLRTGGDQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADDEATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIKRS 180 M ADL K+PSS Q KK E A+SLFDYLFAAMIDTLRTGGDQGPR EELLAETVRAIGFDVGYRLAES QGRVL A++LEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRD+KFRWLAPFTA+DE+TRRAAATVLNFPCGLIKGALENLGI STVQAEVAPAVPSCSFTIKI+RS Sbjct: 8 MAADLLKKPSSTSSQHQNKKVECADSLFDYLFAAMIDTLRTGGDQGPRKEELLAETVRAIGFDVGYRLAESIAQGRVLAAESLEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDAKFRWLAPFTANDESTRRAAATVLNFPCGLIKGALENLGINSTVQAEVAPAVPSCSFTIKIRRS 190
BLAST of NO11G02400 vs. NCBI_GenBank
Match: EWM24968.1 (transport protein particle bet3 containing protein [Nannochloropsis gaditana]) HSP 1 Score: 315.5 bits (807), Expect = 1.200e-82 Identity = 160/183 (87.43%), Postives = 168/183 (91.80%), Query Frame = 0 Query: 1 MVADLPKQPSS----QQGKKAEYAESLFDYLFAAMIDTLRTGGDQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADDEATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIKRS 180 M ADL K+PSS Q KK E A+SLFDYLFAAMIDTLRTGGDQGPR EELLAETVRAIGFDVGYRLAES QGRVL A++LEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRD+KFRWLAPFTA+DE+TRRAAATVLNFPCGLIKGALENLGI STVQAEVAPAVPSCSFTIKI+RS Sbjct: 1 MAADLLKKPSSTSSQHQNKKVECADSLFDYLFAAMIDTLRTGGDQGPRKEELLAETVRAIGFDVGYRLAESIAQGRVLAAESLEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDAKFRWLAPFTANDESTRRAAATVLNFPCGLIKGALENLGINSTVQAEVAPAVPSCSFTIKIRRS 183
BLAST of NO11G02400 vs. NCBI_GenBank
Match: XP_009042422.1 (hypothetical protein AURANDRAFT_59697 [Aureococcus anophagefferens] >EGB02881.1 hypothetical protein AURANDRAFT_59697 [Aureococcus anophagefferens]) HSP 1 Score: 146.7 bits (369), Expect = 7.300e-32 Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 0 Query: 42 GPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADD-EATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 GP+ E + G++VGYR E Q R L AD LE V+KFICK+ W EIF KQIDKLQTN++GVFVL+D FRWLA ++DD EA +R A +L FPCG+++GAL NLGI++TV AE +PSCSF+I+I+ Sbjct: 19 GPQPGETASSRPELHGYEVGYRFVERIAQARALAADHLE--VIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEYG-TLPSCSFSIRIQ 152
BLAST of NO11G02400 vs. NCBI_GenBank
Match: CCI44811.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 144.4 bits (363), Expect = 3.600e-31 Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = 0 Query: 40 DQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTAD-DEATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 +Q E + + +GFDVGYR AE + R P + ++V+KFICKEFWI +FKKQIDKLQTN++GVFVL+D FRWL+ F+A DE+TR A L FPCG I+GAL NLGI + V A+V ++P C F IKIK Sbjct: 41 EQSRAMREDFLKKLEGLGFDVGYRFAERYAKDR--PRMTMPLDVIKFICKEFWISVFKKQIDKLQTNHRGVFVLQDFSFRWLSSFSASADESTREMALVYLVFPCGFIRGALTNLGITAIVNADVT-SLPGCLFNIKIK 176
BLAST of NO11G02400 vs. NCBI_GenBank
Match: CCI44812.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 142.9 bits (359), Expect = 1.100e-30 Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 0 Query: 53 VRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTAD-DEATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 + +GFDVGYR AE + R P + ++V+KFICKEFWI +FKKQIDKLQTN++GVFVL+D FRWL+ F+A DE+TR A L FPCG I+GAL NLGI + V A+V ++P C F IKIK Sbjct: 9 LEGLGFDVGYRFAERYAKDR--PRMTMPLDVIKFICKEFWISVFKKQIDKLQTNHRGVFVLQDFSFRWLSSFSASADESTREMALVYLVFPCGFIRGALTNLGITAIVNADVT-SLPGCLFNIKIK 131
BLAST of NO11G02400 vs. NCBI_GenBank
Match: XP_009039529.1 (hypothetical protein AURANDRAFT_7703, partial [Aureococcus anophagefferens] >EGB05689.1 hypothetical protein AURANDRAFT_7703, partial [Aureococcus anophagefferens]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0 Query: 57 GFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADD-EATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 G++VGYR E Q R L AD LE +KFICK+ W EIF KQIDKLQTN++GVFVL+D FRWLA ++DD EA +R A +L FPCG+++GAL NLGI++TV AE +PSCSF+I+I+ Sbjct: 12 GYEVGYRFVERIAQARALAADHLE--AIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEYG-TLPSCSFSIRIQ 130
BLAST of NO11G02400 vs. NCBI_GenBank
Match: CCA17537.1 (trafficking protein particle complex subunit 6B put [Albugo laibachii Nc14]) HSP 1 Score: 140.2 bits (352), Expect = 6.800e-30 Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 0 Query: 40 DQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTAD-DEATRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 +Q E L + + +GFDVGYR AE + R P ++V+KFICKEFWI +FKKQIDKLQTN++GVFVL+D FRWL+ F++ E+TR A L FPCG I+GAL NLGI + V A+V +P C F IKIK Sbjct: 41 EQNRAMREDLLKKLEGLGFDVGYRFAERYAKDR--PRMLEHLDVIKFICKEFWISVFKKQIDKLQTNHRGVFVLQDFSFRWLSSFSSSTSESTREMALVYLVFPCGFIRGALTNLGITAIVNADVT-TLPGCLFNIKIK 176
BLAST of NO11G02400 vs. NCBI_GenBank
Match: XP_008863329.1 (hypothetical protein H310_01802 [Aphanomyces invadans] >ETW07236.1 hypothetical protein H310_01802 [Aphanomyces invadans]) HSP 1 Score: 139.4 bits (350), Expect = 1.200e-29 Identity = 79/178 (44.38%), Postives = 116/178 (65.17%), Query Frame = 0 Query: 12 QQGKKA--EYAESLFDYLFA----AMIDTLRTGGDQGPR-----NEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADDEA-TRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 QQG+ E AES F L+A +M++ T ++ P ++EL A+ + A G+DVGYR E + R P ++V+KF+CK+FWI IFKKQIDKLQTN++GVFVL+D FRW+ + +++A +++ A L FPCGL++GAL NLGI++ V A++ AVP C F IK++ Sbjct: 2 QQGQSGPHEVAESCFLQLYAEAVRSMVERHPTSAEKSPEDVWTPSDELTAK-LEAFGYDVGYRFVERFSRDR--PRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGENDAESKQKALVFLIFPCGLLRGALANLGILAIVNADL-NAVPGCVFNIKLR 175
BLAST of NO11G02400 vs. NCBI_GenBank
Match: XP_002909490.1 (trafficking protein particle complex subunit 6B [Phytophthora infestans T30-4] >EEY58304.1 trafficking protein particle complex subunit 6B [Phytophthora infestans T30-4]) HSP 1 Score: 139.4 bits (350), Expect = 1.200e-29 Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 0 Query: 18 EYAESLFDYLFAAMIDTLRTG-------GDQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFT-ADDEATRRAAATVLNFPCGLIKGALENLGIISTVQAEV--APAVPSCSFTIKIKR 179 E A+ F LF ++ ++ G ++ + E + + A+G+DVG R AE + + R P ++V+KF+CK+FWI IFKKQIDKLQTN++GVFV++D FRWLA + A D+ TR A L FPCGLI+GAL NLG+ + V A+V A+P C F IKIK+ Sbjct: 3 EVADGCFQQLFGEIVRSMVEGAAATTPTAEEEAAHREAVIIKLEAMGYDVGCRFAERSARDR--PRMLEPLDVIKFVCKDFWIAIFKKQIDKLQTNHRGVFVVQDFSFRWLAGISAATDQETREMALLFLVFPCGLIRGALANLGLTAIVNADVPDVRALPGCLFNIKIKQ 171
BLAST of NO11G02400 vs. NCBI_GenBank
Match: OQR81006.1 (trafficking protein particle complex subunit 6B [Achlya hypogyna]) HSP 1 Score: 136.7 bits (343), Expect = 7.600e-29 Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 0 Query: 18 EYAESLFDYLFAAMIDTLRTGGDQGPRNEELLAETVRAIGFDVGYRLAESTVQGRVLPADALEVNVMKFICKEFWIEIFKKQIDKLQTNNQGVFVLRDSKFRWLAPFTADDEA-TRRAAATVLNFPCGLIKGALENLGIISTVQAEVAPAVPSCSFTIKIK 178 E AE+ F +L+ ++ G + +L A+ + A G+DVGYR E + R + L+ ++KFICK+FWI +FKKQIDKLQTN++GVFVL+D FRW+ +A+ +A +++ A L FPCG+++GAL NLG+++ V A++ AVP C F IKI+ Sbjct: 4 EVAETSFLHLYGEAVERHEAATGSGVLDNDLTAK-LEAFGYDVGYRFVERFSRDRARLVEPLD--IIKFICKDFWIHVFKKQIDKLQTNHRGVFVLQDFNFRWIHALSAETDAESKQKALIFLVFPCGVLRGALANLGLLAIVNADL-NAVPGCVFNIKIR 160 The following BLAST results are available for this feature:
BLAST of NO11G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02400 ID=NO11G02400|Name=NO11G02400|organism=Nannochloropsis oceanica|type=gene|length=588bpback to top protein sequence of NO11G02400.1 >NO11G02400.1-protein ID=NO11G02400.1-protein|Name=NO11G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top Synonyms
Publications
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