NO11G02360, NO11G02360 (gene) Nannochloropsis oceanica

Overview
NameNO11G02360
Unique NameNO11G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2736
Alignment locationchr11:751018..753753 -

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Properties
Property NameValue
DescriptionWD-repeat protein, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:751018..753753 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain
Homology
BLAST of NO11G02360 vs. NCBI_GenBank
Match: CBN78604.1 (WD-repeat protein, putative [Ectocarpus siliculosus])

HSP 1 Score: 96.3 bits (238), Expect = 5.300e-16
Identity = 91/348 (26.15%), Postives = 151/348 (43.39%), Query Frame = 0
Query:   98 SLPASFTGPWDFLPIEWSAVKCRVDRVSYSFP-ETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRK-DLSSDDAPAPTYFVVDACFNKAMLHGWEP--RVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPA---ESGEEMPFWESPTL----GKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAMEVLK 435
            + P +   P+ F   + S VKC+V  +S+ FP +TEE  +   S+VCR+SL VL     +   V +               AY   +F P  A   G + +   +   +S  D     + V +  +N+++   W P  RV ++  +      G+      +G +V LG            +   +       PW  L IRWD +         +   +  WE  P    ESG+  P  E  +L     ++ R+ +   +  +A + +   F  PV   ++  Y  +VP+PM+  LIL RL   YY S+ ALE D  LV  NC  +N+PGS+I++ A  +    ++ +K
Sbjct: 1325 TFPENQAPPYKFFKGQPSVVKCQVKEMSFVFPKDTEE--VGNHSVVCRLSLEVLGFPVRVSSSVVA-RTALNQASRGDNPLAYREDSFAPPPAEDGGGSAEAHSQTFSVSLRDCGEADFLVSERRYNESVGRNWRPSERVMMEWKEGEDGEEGEGVLKPYFGVMVRLGMAXXXXXXXXXXSSRNDWP---NSPWDCLSIRWDLD--------NTISSLGPWEPRPVTWDESGDP-PAVEPASLRACIPRDLRDALAAKVREVAESPDAALFAEPV---DVVDYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQAIK 1654          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: XP_012208686.1 (hypothetical protein SPRG_12989 [Saprolegnia parasitica CBS 223.65] >KDO20632.1 hypothetical protein SPRG_12989 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 90.1 bits (222), Expect = 3.800e-14
Identity = 88/345 (25.51%), Postives = 150/345 (43.48%), Query Frame = 0
Query:  111 PIEWSAVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLA--AGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRKDLSSDDAPA---------------PTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAESGEEMPFW----ESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAMEVLK 435
            P + +AV+C++  ++Y+FP   E Y     ++ ++ L V+A  A  F +D  D+                      DP   A+    + V V  +   DDAP+               P + V+ A +       W  +  V+   VL T       G +  +V+++G ++           S+        PW+ L + +D++  G VR       V+ WE+ PA +   +         P++  E R  +L  L ++       +FVPPVP +  P Y + V  PM+  LI  R+  GYYR + AL  DV+L+L NC+ +N   S I ++A+ L AA + +L+
Sbjct: 1317 PRKVAAVQCQIVHIAYTFP-LVETYKPNQRVLMQLHLEVVALPAVYFEDDGTDA----------------------DPCRRAF---NVFVPVNDNFELDDAPSRERRRFRVHMQPSHCPDFIVLFAKYALGFGAPWNVQDAVQ--TVLPTTD---DHGIQIDAVLNMGTVL----------ASDRADPDVDSPWECLTVLFDDD--GTVR-------VSPWELEPASAEARLAQLALAPPVPSIEGERRAGLLRALASIMQLSVALDFVPPVP-ESTPDYYVTVANPMDLSLIRSRVELGYYRQVDALLADVQLILDNCEKYNVETSPIAQNARALVAAMVSILQ 1610          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: OQS06899.1 (hypothetical protein THRCLA_01069, partial [Thraustotheca clavata])

HSP 1 Score: 89.4 bits (220), Expect = 6.400e-14
Identity = 79/347 (22.77%), Postives = 145/347 (41.79%), Query Frame = 0
Query:  100 PASFTGPWDFLPIEWSAVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRKD-----LSSDDAPAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPA-------ESGEEMPFWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAMEVLK 435
            P+ +   +   P  ++ V+CR+  ++Y+FP   E Y+    I+ ++ L VL    F      S                    NF PV+  ++   +D    +D     L +     P + ++ A +    +  W       G +V  T       G +  SVV+ G +  K+ ++               PW+ L + +D++             +N WE+ P        ++    P    P++  E+R  +L G  ++       +FV PVP +    Y + V  PM+  LI  R+   YYR + AL  DV+L+LTNC+ +N   S+I+++A+ L  A + +++
Sbjct: 1249 PSKYQPAYMRFPQRYAVVQCRIVDITYTFP-LVETYVDGQRILMQLHLEVLGIPSFYFHEHSSDDPCRNDFN-----------NFVPVNDHFE---IDESPTRDHFRFLLHTQPNDCPDFILLHAKYALGFVVDW-----AVGDEVQSTLPSLDIHGVQCDSVVNNGVIKAKQRKD----------ADFDSPWECLSVLFDDDEQCP---------INPWELEPGTPEARLLQTANAPPV---PSIDDEKRAALLRGFASIMQLSVSLDFVHPVP-ESTADYHVTVANPMDLSLIRNRIEHSYYRQVEALLADVQLILTNCEKYNIESSQIVQNARSLVQATLAIIR 1552          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: XP_002906135.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65536.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 77.4 bits (189), Expect = 2.500e-10
Identity = 81/334 (24.25%), Postives = 134/334 (40.12%), Query Frame = 0
Query:  116 AVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRKDLSSDDA------------PAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTG-KRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVR------EAGSGEFVNAWEVLPAESGEEMPFWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAM 431
            AVKCRV  V Y FP  EE ++   +I C +SL VLA                          +     F+P S+ +   T   +     +S+ +                + V+D  +   +   W    RV+ P V     G + +    YG+V S+    ++E      A S  G +    PW+ ++I WD              EA S E      +L         F+    +G E+ E +L  +  + +     +F+ PV  +    YP+ +   ++   I +RLR GYYR + A   DVKL+  NC+ +N P S I ++++ L +A +
Sbjct: 1220 AVKCRVVDVKYVFPTAEE-HVRCSTIKCELSLAVLAVPTSAVRPTGDNEEQKQEEETKEDVASDTVDLFNPESSPFAEFTSVDEQLTPAASEPSTRFNFKILYHSNDVANFLVLDHIYESGVCGSWRVGDRVQMPFVQLNDHGLEEEAKMSYGTVQSI----LRE----PLATSSLGEIT---PWECVKINWDAPDDETFAVCPWEIEAASAEEQREKRLLSLRRRSTRLFFSRYIIG-EKCEALLQEMDQVLTLSISRDFMYPVDEETFMDYPISIANSIDLTKIQQRLRLGYYRQVEAFLADVKLLSINCETYNIPSSAISQNSRNLVSAVL 1540          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: XP_005104695.1 (PREDICTED: bromodomain and WD repeat-containing protein 3-like [Aplysia californica])

HSP 1 Score: 77.0 bits (188), Expect = 3.300e-10
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 0
Query:  329 ESPTLGKE-EREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAMEVLK 435
            E  +LG+E E   ++TG+  L        F+ PV   + PTY   VP PM+ + I  RL  G+YR ++AL+ D++L+  N  +FNQ GS I+++A  L  A +  +K
Sbjct: 1232 EWTSLGREAESARLITGMEMLMQHSFAEPFIAPVDLQQFPTYACFVPYPMDLNTIKARLENGFYRRVTALQWDIRLIFANASIFNQSGSTIVKNANVLTEALLRFIK 1338          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: XP_024573111.1 (hypothetical protein F441_11081 [Plasmopara halstedii] >CEG36742.1 hypothetical protein F441_11081 [Plasmopara halstedii])

HSP 1 Score: 75.9 bits (185), Expect = 7.400e-10
Identity = 83/339 (24.48%), Postives = 128/339 (37.76%), Query Frame = 0
Query:  116 AVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRKDLSSDDA------------PAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAESGEEMPFWE------------SPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAM 431
            A+KCRV  V+Y FP  EE Y    +I C + L VLA         DS               A     F P S  +   T   D      S+ +                + V+D  +   +   W    RV+ P V        +FG    + +S G +     E+I              PW+ + + WD+              V  WE+  A + E     E            S  L  ++ + +L  +  + +     +F+ PV  D    YP+ +  PM+   I +RLR GYYR + A   DVKL+ TNC+ +N   S I ++++ L AA +
Sbjct: 1481 AIKCRVVDVTYVFPTAEE-YTRCSTIKCELLLAVLAVP---ASACDSTRDNREHDEEMKEDTAL----FAPESTPFAQFTSVDDQLLPTVSEPSIRYHFKLLYHSNDVANFLVLDYEYENGVWGDWHVGDRVQMPFVQL-----NEFGLEIEAKLSFGTV-----EKIIQRPFPTSNYGELSPWECVMVNWDDPDDDTCA-------VCPWELEAASADERREKRELSLRRRSTRLFFSRYLVGDKSDALLQEMDQILTLSIARDFMYPVDEDTFIDYPISIANPMDLTKIQQRLRLGYYRQVEAFVADVKLLSTNCETYNISSSPISQNSRNLVAAIL 1794          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: XP_009515047.1 (hypothetical protein PHYSODRAFT_308854 [Phytophthora sojae] >EGZ27772.1 hypothetical protein PHYSODRAFT_308854 [Phytophthora sojae])

HSP 1 Score: 74.3 bits (181), Expect = 2.100e-9
Identity = 92/341 (26.98%), Postives = 143/341 (41.94%), Query Frame = 0
Query:  116 AVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDVDVRKDLSSDDAPA-------------PTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAESGEEMP-------------FWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRLQAAAM 431
            AVKCRV  V Y FP  EE +    +I C ++L V             XXXXXXXXXXXX   +     F+P S+ +   T  VD + + ++ +  A               + V+D  +   +   W+   RV+ P V        + G    + +S GK+     + + A+ S E       PW+ + + WD               V  WE+  A   E                F+    +G E+ E +L  +  + +     +F+ PV  +    YP  V  P++   I  RLR GYYR + A   DVKL+  NC+ +N P S I ++++ L AA +
Sbjct: 1189 AVKCRVVDVKYVFPTAEE-HARCSTIKCELALAVXXXXXXXXXXXXXXXXXXXXXXXXXGVPSDTADLFNPESSPFAEFT-SVDEQLNPTTAEPSARFNFKVLYHSNDVANFLVLDHIYESGVCGNWQVGDRVQMPFVQLD-----EHGLEIEAKMSYGKIESVLRKPLVASSSGE-----ISPWECVRVEWDSPDDETCA-------VCPWELEAAADDERREKRQLALGRRSTRLFFSRSIIG-EKCEALLQEVDQVLTLSFSRDFMYPVDEETFMDYPYSVANPIDLTKIQRRLRLGYYRQVEAFLADVKLLRINCETYNIPSSPISQNSRNLYAAVL 1509          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: CCI44451.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 74.3 bits (181), Expect = 2.100e-9
Identity = 78/332 (23.49%), Postives = 129/332 (38.86%), Query Frame = 0
Query:  116 AVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLA------AGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDV--DVRKDLSSDDAPAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQG--PGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAES------------GEEMPFWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRL 426
            AV+C+V  + Y FP  EE Y    +I C ++L+VLA      +    E                    A  +  F  V    + C  D     +  L         + ++D  +   + H W+   RV+ P VL       K+G    S +S G         I A    +   +G     ++ +++ WD+   G         FV+ WE+ P ++             EE   + S  L    R  +L+ +  +       +FV  V  +    Y + +  P+    I ER+R GYYR   AL  D KL+ +NC+L+N   S I ++A+ +
Sbjct: 1442 AVRCKVINIDYVFPAIEE-YDQTQTIRCELTLSVLAVPTSRISTSLEESNRGWDTNGRYQMEALDQDFASYFRTFQSVDENLQTCLNDTTRHFQFKLQYHSHDVANFLILDYQYMNGVNHKWKLGDRVETPFVLLD-----KYGMEIESKLSCG--------TISAINVHKSTAEGISCSSYECIKVSWDDGDNGEC-------FVSPWELEPLDTRRREDKQRRDYEREESVLFRSRRLDGTVRLALLSEINNIMELSISRDFVDAVD-ESFLDYLITIANPINLTQIRERIRLGYYRQAEALLADAKLLTSNCELYNVDSSTIAQNARTI 1751          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: CCI44452.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 74.3 bits (181), Expect = 2.100e-9
Identity = 78/332 (23.49%), Postives = 129/332 (38.86%), Query Frame = 0
Query:  116 AVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVLA------AGEFIEDMVDSXXXXXXXXXXXXXXXAYGWWNFDPVSAAWKGCTLDV--DVRKDLSSDDAPAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKFGFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQG--PGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAES------------GEEMPFWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRL 426
            AV+C+V  + Y FP  EE Y    +I C ++L+VLA      +    E                    A  +  F  V    + C  D     +  L         + ++D  +   + H W+   RV+ P VL       K+G    S +S G         I A    +   +G     ++ +++ WD+   G         FV+ WE+ P ++             EE   + S  L    R  +L+ +  +       +FV  V  +    Y + +  P+    I ER+R GYYR   AL  D KL+ +NC+L+N   S I ++A+ +
Sbjct: 1443 AVRCKVINIDYVFPAIEE-YDQTQTIRCELTLSVLAVPTSRISTSLEESNRGWDTNGRYQMEALDQDFASYFRTFQSVDENLQTCLNDTTRHFQFKLQYHSHDVANFLILDYQYMNGVNHKWKLGDRVETPFVLLD-----KYGMEIESKLSCG--------TISAINVHKSTAEGISCSSYECIKVSWDDGDNGEC-------FVSPWELEPLDTRRREDKQRRDYEREESVLFRSRRLDGTVRLALLSEINNIMELSISRDFVDAVD-ESFLDYLITIANPINLTQIRERIRLGYYRQAEALLADAKLLTSNCELYNVDSSTIAQNARTI 1752          
BLAST of NO11G02360 vs. NCBI_GenBank
Match: GAN11175.1 (bromodomain and WD repeat-containing protein 3-like [Mucor ambiguus])

HSP 1 Score: 74.3 bits (181), Expect = 2.100e-9
Identity = 42/142 (29.58%), Postives = 70/142 (49.30%), Query Frame = 0
Query:  284 PGPWKWLEIRWDEEGGGGVREAGSGEFVNAWEVLPAESGEEMPFWESPTLGKEEREVMLTGLTALASTDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETDVKLVLTNCQLFNQPGSEIIESAKRL 426
            P PW +  + WD+        + + E ++ WE++P      M +    TL   + +     +  LAS D+FY +V  V + + P Y  V+  P+  D ++ERL  GYYR++  L  DV+L+  N   +N   S   ++A RL
Sbjct: 1280 PSPWAFYHVIWDD-------ASSNAEDLSPWELVPTGEDFRMRYDVGSTLTPAQIKRAKDTIAWLASVDDFYLYVHQVNYYDYPPYLSVIAYPICLDTVVERLDNGYYRTVDGLIDDVELIKKNAMKYNAESSPAHKNAIRL 1414          
The following BLAST results are available for this feature:
BLAST of NO11G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN78604.15.300e-1626.15WD-repeat protein, putative [Ectocarpus siliculosu... [more]
XP_012208686.13.800e-1425.51hypothetical protein SPRG_12989 [Saprolegnia paras... [more]
OQS06899.16.400e-1422.77hypothetical protein THRCLA_01069, partial [Thraus... [more]
XP_002906135.12.500e-1024.25conserved hypothetical protein [Phytophthora infes... [more]
XP_005104695.13.300e-1036.45PREDICTED: bromodomain and WD repeat-containing pr... [more]
XP_024573111.17.400e-1024.48hypothetical protein F441_11081 [Plasmopara halste... [more]
XP_009515047.12.100e-926.98hypothetical protein PHYSODRAFT_308854 [Phytophtho... [more]
CCI44451.12.100e-923.49unnamed protein product [Albugo candida][more]
CCI44452.12.100e-923.49unnamed protein product [Albugo candida][more]
GAN11175.12.100e-929.58bromodomain and WD repeat-containing protein 3-lik... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002018NSK002018Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02360.1NO11G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630817gene_5131Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100122g1gene5518Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02360.1NO11G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02360 ID=NO11G02360|Name=NO11G02360|organism=Nannochloropsis oceanica|type=gene|length=2736bp
ATGGAGATGGCAAGGGAGTGGTTGAGGGCATCGACGCAGGAGCAGGACGT
GAGCGGGTTGTTGGTGCCACAGCAGGGAGATGAGGTTATTTATTTGCCCC
GGGCACATTATGAGGCTCAGGTCCGGGTGCAGTGGAAAGAGATGGAGTTT
ACGAAGGCCGCAGGTGGAGGCGGGGGAGGGGGAAAGAAAAAAGCAGGCGC
CACAGCTGCAGCAGTTGCAGGAGCAGGAGCAGGAGGAGGAGGAGGAGTAG
GATTGTCGGTCTTGCCAGCAGCTGGAGGAGGAGCACCAGCGTCTCTGCCC
GCTTCATTTACCGGCCCATGGGATTTCCTCCCGATTGAGTGGTCGGCGGT
GAAGTGTAGGGTAGACAGGGTCTCGTACTCATTCCCTGAGACGGAAGAGG
CCTACCTGGCCGCTCCCTCGATCGTTTGCCGTGTCTCTCTGACCGTATTG
GCGGCAGGCGAGTTTATCGAGGACATGGTGGACAGCGAGGAGGAGGAGGA
GGCCATGAAGGAGGGAGGGGGGGGGAAACAGGCTTATGGATGGTGGAATT
TCGACCCGGTCTCGGCGGCTTGGAAGGGATGCACCCTTGATGTGGATGTG
AGGAAGGATCTGAGCAGCGACGACGCCCCGGCACCCACCTATTTCGTGGT
GGATGCGTGTTTTAATAAGGCCATGCTGCATGGATGGGAGCCACGGGTGA
GGGTGAAGGGGCCGCAGGTGCTCTATACGAGGACGGGGAAGAGAAAGTTT
GGGTTCAGGTATGGGTCAGTGGTGTCCCTGGGCAAAATGATGATGAAGGA
GGATGAGGAGATCCAGGCGGCGGGCTCGGAGGAAGGCGCAGTCCAGGGGC
CAGGTCCGTGGAAGTGGTTGGAGATCCGGTGGGATGAAGAGGGGGGAGGA
GGAGTAAGAGAAGCAGGGAGTGGGGAGTTTGTGAATGCGTGGGAGGTGTT
GCCCGCGGAGTCGGGGGAGGAAATGCCGTTCTGGGAGTCTCCCACGTTGG
GGAAGGAGGAGAGGGAGGTAATGTTGACGGGATTGACGGCGCTTGCGTCT
ACAGATGAGTTTTATAACTTTGTTCCACCCGTACCTTGGGACGAGCTGCC
GACGTACCCGCTGGTGGTTCCATTGCCGATGGAATATGACTTGATTTTGG
AGAGGTTAAGGGGAGGTTACTATCGTTCGCTTTCAGCGTTGGAGACGGAT
GTGAAGCTGGTGCTAACGAATTGTCAGCTTTTCAACCAGCCCGGTTCGGA
GATAATTGAGAGTGCAAAACGTTTGCAAGCGGCAGCGATGGAGGTGTTGA
AGGAGGGAAAGAAGGCGGCGGCGGTGGCGGCGAGAGAGAAGGAGAAGGAG
AAAAAGCAGAAAAAGACTACGGCAGGAGAGGAAGAGGAGGAGGGGGGAGA
GGTGGGGAGGCTTAAAGGGAGTGGTGTGTTGGCGGCGGCATCGGCCTCGA
TGGGTGGGGTGAAGGTTGGTCAAGGGATGGAGGAAGGGGGAGGGGGTGGG
GGGAGAGGGCAGGAAGGGGGAGCGTTTCGTCGGAGTGGCCGCGAGCGCAA
GCGACGACAGGCGTTTGATGGGGAAGAAGAGGAGGATGAGGAAGAGGAGG
AGGTGCAGGGGCATCAGCGTCGGCTTCGAGGTGGAGGACACCATGCCGCT
GCTTCCGTTACTGCCGTTACTGGGTCGTCCGAACGGTCTCGTCGGGAGCG
AAAGCGGAATCGGATTTACGAAGATGATGGAGACGAGGAGAACGGGGGCA
TTGAGCACAAGCACGCAGGGCTGGGCATCACTGATGGGCACCGCTATCGC
AGTGTACGACTCGCGACCAGCCAGGCGATTGCTGCGTCTCTCGCGGAAAC
TAATGGCAGCCATGGCAATAACAACTTAGCCATCATCAACGGCAGCAGCA
ACAGCAACAGTCGTCGTTCCACCCGTCGCGGCACAAGGCTTGCTTCGCAC
TCCTCTCCCACTTTCCCCCGTGCCGCAGCTGCCCTTACGCAGCAGCAACA
ACGGCACCAGCATCAAGAGCCTCGGCAGCAGCTGCCTGTGCGACGTTTTC
GTGTAGTGGATTCCCCTGTGGTGTGTGAAGGAGGGAGGGCAGGACTGCGT
ACTTACAATATGTGCATCCGTCTCAGGCGTCTCTCGGTAGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGAGGACAGCCATGACCGGAAAGAAGCGGAAGAAGAGAATGAGGAG
GACGAGCACGACGGCAACGGCGGCGCTTGCGTGGCTGGGGAGTCCTCGAA
GGAAGGGGAGGATAGGGAAAGCGGAAATATGGGGTTGGGTATGCGCCGCA
TGCGTCTGAGCGTGGATCAAAGGTCTACCGCTCCTGGTGCTCGCGGAGCC
TTGGTAAGTGGTGGTACTGCCTCCTCCTCCTTCACCTCGTCACCTGCTCT
GACCGAGGGACTTTCTACCGAACGGATGCAAAAAGTAATTAGATGTTTTT
TGGACAAGCTGGTGCTTGCGGACCACTACCAAGTCTTGACTGACCAAGGC
GCATGGGCGGATATCTACAGGCGGGGAATGACGGCACGGTTTGGGTCGGT
GGATGAGGTGGAAGGGGAGGTTAGGGTGTTGGTGGAGGGGGTGGCAAGGA
GCAGTGAGACGATATTTATGTCGGAAGGACGACGGATGTTAAATCATTTG
CCGACACTGATTCAGGAGGCGGTAAATGAAAGTTAG
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protein sequence of NO11G02360.1

>NO11G02360.1-protein ID=NO11G02360.1-protein|Name=NO11G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=912bp
MEMAREWLRASTQEQDVSGLLVPQQGDEVIYLPRAHYEAQVRVQWKEMEF
TKAAGGGGGGGKKKAGATAAAVAGAGAGGGGGVGLSVLPAAGGGAPASLP
ASFTGPWDFLPIEWSAVKCRVDRVSYSFPETEEAYLAAPSIVCRVSLTVL
AAGEFIEDMVDSEEEEEAMKEGGGGKQAYGWWNFDPVSAAWKGCTLDVDV
RKDLSSDDAPAPTYFVVDACFNKAMLHGWEPRVRVKGPQVLYTRTGKRKF
GFRYGSVVSLGKMMMKEDEEIQAAGSEEGAVQGPGPWKWLEIRWDEEGGG
GVREAGSGEFVNAWEVLPAESGEEMPFWESPTLGKEEREVMLTGLTALAS
TDEFYNFVPPVPWDELPTYPLVVPLPMEYDLILERLRGGYYRSLSALETD
VKLVLTNCQLFNQPGSEIIESAKRLQAAAMEVLKEGKKAAAVAAREKEKE
KKQKKTTAGEEEEEGGEVGRLKGSGVLAAASASMGGVKVGQGMEEGGGGG
GRGQEGGAFRRSGRERKRRQAFDGEEEEDEEEEEVQGHQRRLRGGGHHAA
ASVTAVTGSSERSRRERKRNRIYEDDGDEENGGIEHKHAGLGITDGHRYR
SVRLATSQAIAASLAETNGSHGNNNLAIINGSSNSNSRRSTRRGTRLASH
SSPTFPRAAAALTQQQQRHQHQEPRQQLPVRRFRVVDSPVVCEGGRAGLR
TYNMCIRLRRLSVEEEEEEEEEEEEEEEEEEEEEEEDSHDRKEAEEENEE
DEHDGNGGACVAGESSKEGEDRESGNMGLGMRRMRLSVDQRSTAPGARGA
LVSGGTASSSFTSSPALTEGLSTERMQKVIRCFLDKLVLADHYQVLTDQG
AWADIYRRGMTARFGSVDEVEGEVRVLVEGVARSSETIFMSEGRRMLNHL
PTLIQEAVNES*
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Synonyms
Publications