NO11G02350, NO11G02350 (gene) Nannochloropsis oceanica

Overview
NameNO11G02350
Unique NameNO11G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length489
Alignment locationchr11:750128..750616 -

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Properties
Property NameValue
DescriptionPhenylpyruvate tautomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:750128..750616 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014347Tautomerase/MIF_sf
IPR001398Macrophage_inhib_fac
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_005852670.1 (phenylpyruvate tautomerase, partial [Nannochloropsis gaditana CCMP526] >EKU23162.1 phenylpyruvate tautomerase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 213.4 bits (542), Expect = 5.300e-52
Identity = 113/162 (69.75%), Postives = 132/162 (81.48%), Query Frame = 0 
Query:    6 LLAVLTLGCSCLHHAIAFMAASPLS-----SASRHAGTFARKGVMLKPTLIVHHTGGELAEDKKEAFLKEASKTVSTTLGKAESYVMVSLNPSAMSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTFG 163
            LL ++    + +H   AFMA  P+S      ++ +A +FAR  V++KPTLIVHHTGGEL  D+K AFL EASKTVS TLGKAESYVMVS+ PS+MSF G  GNAAFLYLASIGHIGPETNKPAAKEL+ALVEKH+GIP++RVFIQFSDAAAANFAW+GNTFG
Sbjct:   23 LLPLVAFLIAQMHQVNAFMAYRPISLTTHVDSTPYARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNTFG 184
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BLAST of NO11G02350 vs. NCBI_GenBank
Match: EWM24991.1 (macrophage migration inhibitory factor [Nannochloropsis gaditana])

HSP 1 Score: 211.5 bits (537), Expect = 2.000e-51
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0 
Query:    6 LLAVLTLGCSCLHHAIAFMAASPLS-----SASRHAGTFARKGVMLKPTLIVHHTGGELAEDKKEAFLKEASKTVSTTLGKAESYVMVSLNPSAMSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNT 161
            LL ++    + +H   AFMA  P+S      ++ HA +FAR  V++KPTLIVHHTGGEL  D+K AFL EASKTVS TLGKAESYVMVS+ PS+MSF G  GNAAFLYLASIGHIGPETNKPAAKEL+ALVEKH+GIP++RVFIQFSDAAAANFAW+GNT
Sbjct:   45 LLPLVAFLIAQMHQVNAFMAYRPISLTTYVDSTPHARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204
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BLAST of NO11G02350 vs. NCBI_GenBank
Match: CEM24109.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 120.2 bits (300), Expect = 6.100e-24
Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 0 
Query:   46 LKPTLIVHHTGGELAEDKKEAFLKEASKTVSTTLGKAESYVMVSLNPSAMSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            + P+LIV  T  +L +  ++AFL EAS  V++ LGK ESY++VS   S M FGG+ G  AF+YLASIG IGP+TN   +  +S LVEKHLG+PSDR +IQF D+  +NF +RG TF
Sbjct:    1 MMPSLIVTST-ADLDKAAEDAFLTEASSAVASGLGKPESYMLVSYTRSNMRFGGSEGPVAFVYLASIGKIGPDTNPKVSATISGLVEKHLGVPSDRCYIQFVDSPGSNFGYRGGTF 115
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_006429494.1 (macrophage migration inhibitory factor homolog isoform X2 [Citrus clementina] >XP_006481117.1 PREDICTED: macrophage migration inhibitory factor homolog isoform X2 [Citrus sinensis] >ESR42734.1 hypothetical protein CICLE_v10013125mg [Citrus clementina])

HSP 1 Score: 89.4 bits (220), Expect = 1.200e-14
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:   66 AFLKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            + L EA+ TV+  +GK E+YVM+ L  S  MSFGGT   AA+  L SIG + P+ NK  +  +SA++EK L +P  R FI+F D   +NF W G+TF
Sbjct:   19 SILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 115
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_002966661.1 (macrophage migration inhibitory factor homolog [Selaginella moellendorffii] >XP_024527047.1 macrophage migration inhibitory factor homolog [Selaginella moellendorffii] >EFJ20734.1 hypothetical protein SELMODRAFT_271294 [Selaginella moellendorffii] >EFJ32688.1 hypothetical protein SELMODRAFT_144009 [Selaginella moellendorffii])

HSP 1 Score: 87.4 bits (215), Expect = 4.400e-14
Identity = 43/95 (45.26%), Postives = 65/95 (68.42%), Query Frame = 0 
Query:   68 LKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            LK+AS+TV+  LGK ESYVM+ +N +  +SFGG+   AA+  L SIG I P++NK  +K ++ L++  L +P +R +I+F D   +NF W G+TF
Sbjct:   21 LKDASRTVARVLGKPESYVMIIINGAVPISFGGSEEPAAYGELVSIGAISPDSNKKLSKAIAELLQSKLAVPPNRFYIKFYDVKGSNFGWNGSTF 115
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_024538805.1 (macrophage migration inhibitory factor homolog [Selaginella moellendorffii] >XP_002978077.2 macrophage migration inhibitory factor homolog [Selaginella moellendorffii])

HSP 1 Score: 87.4 bits (215), Expect = 4.400e-14
Identity = 43/95 (45.26%), Postives = 65/95 (68.42%), Query Frame = 0 
Query:   68 LKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            LK+AS+TV+  LGK ESYVM+ +N +  +SFGG+   AA+  L SIG I P++NK  +K ++ L++  L +P +R +I+F D   +NF W G+TF
Sbjct:   50 LKDASRTVARVLGKPESYVMIIINGAVPISFGGSEEPAAYGELVSIGAISPDSNKKLSKAIAELLQSKLAVPPNRFYIKFYDVKGSNFGWNGSTF 144
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: PSC70071.1 (DNA ligase [Micractinium conductrix])

HSP 1 Score: 87.0 bits (214), Expect = 5.700e-14
Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:   48 PTLIVHHTGGELAEDKKEAFLKEASKTVSTTLGKAESYVMVSLNP-SAMSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            P+ + +  G  ++  +  A   + SK VS   GK E+YVMVS  P  AM FGGT    A+  L SIG IG E NK  +  L+ +V++HLG+PS R +I+F D + ++F W G TF
Sbjct: 1796 PSAVTNVPGDRVSSSQINA---DLSKAVSAATGKPEAYVMVSFEPGKAMIFGGTEEPCAYGELISIGAIGGEKNKKISTALAEVVQRHLGVPSSRFYIKFYDVSRSDFGWSGTTF 1907
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: ACJ86191.1 (unknown [Medicago truncatula])

HSP 1 Score: 86.7 bits (213), Expect = 7.500e-14
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:   66 AFLKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            + L EA+ TV+T +GK ESYVM+ L  S  +SFGGT   AA+  L SIG + P+ NK  +  ++A++E  L +P  R F++F D   +NF W G TF
Sbjct:   19 SILSEATSTVATLIGKPESYVMIMLKGSVPISFGGTEQEAAYGELVSIGGLNPDVNKKLSAAIAAILETKLSVPKTRFFLKFYDTKGSNFGWNGTTF 115
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_009387626.1 (PREDICTED: macrophage migration inhibitory factor homolog [Musa acuminata subsp. malaccensis])

HSP 1 Score: 86.7 bits (213), Expect = 7.500e-14
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:   66 AFLKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            A L EASKTV+  +GK E+YVM+ L  SA MSFGGT   AA+  L SIG +  + NK  +  ++A++E  L +P  R F++F D   +NF W G+TF
Sbjct:   19 AILSEASKTVARLIGKPEAYVMIVLKGSAPMSFGGTEQPAAYGELVSIGGLNADVNKKLSAAVAAILETKLSVPKSRFFLKFYDTKGSNFGWNGSTF 115
[Close]
BLAST of NO11G02350 vs. NCBI_GenBank
Match: XP_010921043.1 (PREDICTED: macrophage migration inhibitory factor homolog [Elaeis guineensis])

HSP 1 Score: 86.7 bits (213), Expect = 7.500e-14
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:   66 AFLKEASKTVSTTLGKAESYVMVSLNPSA-MSFGGTLGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAAAANFAWRGNTF 162
            A L EA+KTV+  +GK E+YVM+ L  S  MSFGGT   AA+  L SIG + P+ NK  +  +++++E  L +P  R FI+F D   +NF W G+TF
Sbjct:   19 AILSEATKTVAKLIGKPEAYVMIVLKGSVPMSFGGTEQPAAYGELVSIGGLNPDVNKKLSGAIASILETKLSVPKSRFFIKFYDTKGSNFGWNGSTF 115
The following BLAST results are available for this feature:
BLAST of NO11G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852670.15.300e-5269.75phenylpyruvate tautomerase, partial [Nannochlorops... [more]
EWM24991.12.000e-5170.00macrophage migration inhibitory factor [Nannochlor... [more]
CEM24109.16.100e-2453.45unnamed protein product [Vitrella brassicaformis C... [more]
XP_006429494.11.200e-1446.39macrophage migration inhibitory factor homolog iso... [more]
XP_002966661.14.400e-1445.26macrophage migration inhibitory factor homolog [Se... [more]
XP_024538805.14.400e-1445.26macrophage migration inhibitory factor homolog [Se... [more]
PSC70071.15.700e-1441.74DNA ligase [Micractinium conductrix][more]
ACJ86191.17.500e-1444.33unknown [Medicago truncatula][more]
XP_009387626.17.500e-1446.39PREDICTED: macrophage migration inhibitory factor ... [more]
XP_010921043.17.500e-1445.36PREDICTED: macrophage migration inhibitory factor ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002019NSK002019Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02350.1NO11G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100122g2gene5517Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02350.1NO11G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02350 ID=NO11G02350|Name=NO11G02350|organism=Nannochloropsis oceanica|type=gene|length=489bp
ATGCGCACCTCTGAGCTGCTTGCCGTTCTCACGCTGGGCTGCTCCTGCCT
CCATCATGCCATCGCCTTTATGGCAGCCTCTCCCTTGTCATCCGCATCTC
GGCATGCTGGGACGTTTGCCCGCAAAGGCGTGATGCTTAAGCCTACCTTA
ATTGTCCATCACACGGGCGGAGAGCTGGCGGAGGACAAAAAGGAAGCGTT
TCTGAAGGAAGCAAGCAAGACTGTTAGTACTACCCTTGGCAAAGCAGAGA
GCTACGTTATGGTGTCCTTAAACCCGTCCGCCATGTCCTTTGGCGGCACA
CTAGGCAATGCTGCCTTTCTTTACCTTGCTAGCATTGGTCACATTGGACC
AGAGACGAACAAACCTGCTGCCAAGGAATTGTCTGCGTTGGTCGAGAAGC
ACCTGGGGATTCCTAGCGACCGTGTTTTTATCCAATTTTCCGATGCGGCC
GCTGCAAATTTTGCATGGCGAGGGAATACGTTTGGTTGA
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protein sequence of NO11G02350.1

>NO11G02350.1-protein ID=NO11G02350.1-protein|Name=NO11G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bp
MRTSELLAVLTLGCSCLHHAIAFMAASPLSSASRHAGTFARKGVMLKPTL
IVHHTGGELAEDKKEAFLKEASKTVSTTLGKAESYVMVSLNPSAMSFGGT
LGNAAFLYLASIGHIGPETNKPAAKELSALVEKHLGIPSDRVFIQFSDAA
AANFAWRGNTFG*
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Synonyms
Publications