NO11G02260, NO11G02260 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G02260
Unique Name	NO11G02260
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2942
Alignment location	chr11:730127..733068 +

Link to JBrowse

Properties


Property Name	Value
Description	Chaperonin

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:730127..733068 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0042026	protein refolding
GO:0009987	cellular process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0016020	membrane
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR027410	TCP-1-like_intermed
IPR027409	GroEL-like_apical_dom
IPR027413	GROEL-like_equatorial
IPR002423	Cpn60/TCP-1
IPR001844	Chaprnin_Cpn60

Homology

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: EWM24977.1 (chaperonin [Nannochloropsis gaditana])

HSP 1 Score: 987.3 bits (2551), Expect = 2.100e-284
Identity = 557/592 (94.09%), Postives = 576/592 (97.30%), Query Frame = 0

Query:    1 MKWGVLGAIIATLAVGTTAFLPPAALPELASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFDGGGQYM 593
            MK GV   ++ATL V T+AFL PAALPEL+  R   +RRG+ +TTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIEL+DPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGI H +K+LCDT+KQMAKPVESNKDLFDIATVATGGNAEMGAVIAKA+ELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDV+GEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVT+S YA+AIKERILAI+REMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIA+NAGIDGGIVVERIFENQEWGWGYNAA+GVYENLL+TGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFDGGGQYM
Sbjct:   15 MKRGVSMVVMATLLVSTSAFLAPAALPELSKTRSVAARRGSLTTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELSDPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIQHTAKILCDTVKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAFELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVSGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTNSNYAEAIKERILAIRREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAENAGIDGGIVVERIFENQEWGWGYNAASGVYENLLNTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFDGGGQYM 606

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: CBJ29911.1 (chaperonin cpn60 [Ectocarpus siliculosus])

HSP 1 Score: 654.8 bits (1688), Expect = 2.500e-184
Identity = 354/566 (62.54%), Postives = 443/566 (78.27%), Query Frame = 0

Query:   29 LASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD--GGGQYM 593
            ++S+ G  SR G A  +M AK+V   E +R+KL +GIN VA+AVKVTLGPKGRNVVLER YG PEIVNDGVTIARDIE+ + E+NVGVKLVQEVA KSD +AGDGTTTST++TQ IVNQGMR VT+GANPV LR+GI+  S ++ + IK++A PV  N+DL ++AT+A+ G++ MG +IAKA+E VGD+GSTVVEESQT+ DEVEFTEGL+IDRGY+SPYF+ DQER L E + P++LVT+ KI  V++++PLLE + ++KEPL I+AEDV GEALSALVVNKMRGVLDVVA+KAP FG+RRK  LQDIA+ATG+T+VAEEVG+TL+ V  EMLG A+++VV K+ TTIV+     +A+K RI  I+++ +  DS FDKEKA +RVAALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA+E+G+VP                           G  I+ RSLSAP+MQIA+NAG++GGIVV +  +N+EWG+GYNAA   Y +LL  GV+D AKV INA+ENSAS+AS+VLTTECLI EIP + S  Q   ++D  GGG YM
Sbjct:   58 VSSLAGRRSRAGTA-LSMGAKSVVFGEDARKKLADGINAVADAVKVTLGPKGRNVVLERAYGAPEIVNDGVTIARDIEVENHEENVGVKLVQEVAQKSDNRAGDGTTTSTLLTQEIVNQGMRLVTSGANPVELRQGILAASGMIIEEIKKLAVPVGKNEDLLNVATIAS-GSSTMGGIIAKAFERVGDTGSTVVEESQTLGDEVEFTEGLTIDRGYLSPYFISDQERSLCEFKNPKILVTDKKIDQVNDLIPLLEAMVQAKEPLLIMAEDVVGEALSALVVNKMRGVLDVVAVKAPSFGERRKNYLQDIAIATGSTYVAEEVGLTLDQVKIEMLGTADRIVVMKEQTTIVSDGRNDEAVKARIKTIRKDAETSDSAFDKEKADERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALELGIVPGGGACLQYLQRMDEEFRARVEGEDRKAGVGILMRSLSAPMMQIAKNAGVEGGIVVAKC-DNKEWGFGYNAANSEYCDLLEAGVLDPAKVTINAVENSASVASLVLTTECLIAEIPVKVSEAQQQANYDAMGGGDYM 620

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: XP_009038899.1 (hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens] >EGB06320.1 hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens])

HSP 1 Score: 654.8 bits (1688), Expect = 2.500e-184
Identity = 361/579 (62.35%), Postives = 439/579 (75.82%), Query Frame = 0

Query:    6 LGAIIATLAVGT-TAFLPPAALPELASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIP-ERKSLDQAA 583
            +  +I  L  GT  AF P A  P+             A+T + AK V   + SR +LV GIN VA+AVKVTLGPKGRNVVLER YG PEIVNDGVTIARDIEL DP  N+G KL+QEVA+KSD KAGDGTTTST++TQ +VNQGM+ V++G NPVALRRG+   +  L   +  +AKPV+SN +L +IATVAT GNA MGA+IAKA+E VGD+GST +EESQT+ DEVEFTEGL+IDRGYVSPYFV DQERQL E+  P++LVT+ KI  V++++PLLE   K+KE L I+AEDV GEALSALVVNKMRGVLDVVAIKAPGFG RRK LLQDIA+ATGAT+VA+EVGV L++VTPEMLG  E++VVGK+ TTI+T    ADA+++RI  IK E +  DS FDKEKA++RVAALGGGIARIKVGAATETELKDKKLRYEDALN+VKSA++MG++P                           GADIVF SL+APV QIA+NAG++G +V+ ++ E + +G+GYNAATG Y +L   GVVDSA+V ++ALENSASIA +VLTTE LI EIP E   +D+ A
Sbjct:    1 MSKLILALMCGTAAAFAPSAPAPK-------------ATTKLEAKKVLFGDASRAQLVAGINAVADAVKVTLGPKGRNVVLERAYGAPEIVNDGVTIARDIELDDPAMNIGAKLIQEVASKSDSKAGDGTTTSTLLTQELVNQGMKAVSSGVNPVALRRGMSKATDALIVEVTALAKPVDSNDELLNIATVATSGNAVMGAIIAKAFEKVGDTGSTTMEESQTLTDEVEFTEGLTIDRGYVSPYFVNDQERQLCEMLDPKILVTDQKIENVNDLIPLLEACVKTKERLVIIAEDVVGEALSALVVNKMRGVLDVVAIKAPGFGTRRKDLLQDIAIATGATYVAQEVGVALDTVTPEMLGTCERIVVGKEETTIITDGKQADAMEKRIAQIKLEAENTDSMFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDALNAVKSALKMGILPGGGSTLSYLLRKRDAIAGAMDDEDERRGADIVFNSLAAPVCQIAKNAGLEGQVVLSKV-EGKPFGFGYNAATGEYCDLFEAGVVDSAQVTLSALENSASIAGLVLTTEALIHEIPVEMSEMDKLA 565

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: AFA52570.1 (chaperonin [Vaucheria litorea])

HSP 1 Score: 650.2 bits (1676), Expect = 6.200e-183
Identity = 359/587 (61.16%), Postives = 441/587 (75.13%), Query Frame = 0

Query:    9 IIATLAVG-TTAFLPPAALPELASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD--GGGQYM 593
            ++  LAV   ++F PP  L    S          +   M AK V   E+SR+KLVEGIN VANAV+VTLGPKGRNVVLER YG PEIVNDGVTIARDI L DPE NVG +LVQEVA KSD +AGDGTTT+TVMTQAIVN G+R VT+GANPV LRRGI   S+ L   IK+++KPV   KDL  +AT+A+ G+A MG++I++A+E VG++GSTVVEESQT+ DEV+FTEGL+I+RGY+SPYFV D+ERQ+ E+ KP++LVT+ KI  V+E++PLLE + KSKEPLFIVAEDV GEALSALVVNKMRGVLDV AIKAP FGDRRK  LQDIA+ATGAT+VAEEVG++L+ VT +MLG   ++VV K+ TTIVT    A+A+ +RI AI++E    D++FD+EK  +R+AALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA+EMG+VP                           GA I+F+SLSAP  QIA NAG++GG+V E+   N E+G+GYNAA   Y +L   GV+D AKV INA+ENSAS+AS+VLTTE LITEIP + +  Q  + +D  GGG YM
Sbjct:   10 VLLLLAVAQISSFAPPIHLKSHVS--------NKSPFMMAAKKVSFGEESRKKLVEGINQVANAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLEDPEHNVGARLVQEVAQKSDNRAGDGTTTATVMTQAIVNNGLRSVTSGANPVELRRGIKIASEFLIKQIKELSKPVNGIKDLNSVATIAS-GSAVMGSIISQAFEKVGETGSTVVEESQTLTDEVDFTEGLTIERGYLSPYFVGDKERQVCEMLKPKILVTDRKIDQVNELIPLLESMVKSKEPLFIVAEDVTGEALSALVVNKMRGVLDVCAIKAPSFGDRRKAYLQDIAIATGATYVAEEVGISLDQVTDDMLGTCARLVVSKEGTTIVTDGAQAEAVAKRIEAIRKEKSSTDNQFDQEKCDERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMVYLQRYQDKVCSLCANEDEVLGAGILFKSLSAPCKQIAYNAGVEGGVVWEKT-RNMEFGFGYNAAKDEYGDLFEMGVIDPAKVTINAIENSASVASLVLTTEALITEIPVKLTPQQEQEQYDEMGGGNYM 586

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: XP_002291674.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91781.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 623.6 bits (1607), Expect = 6.200e-175
Identity = 345/596 (57.89%), Postives = 440/596 (73.83%), Query Frame = 0

Query:    1 MKWGVLGAIIATLAVGTTAFLPPAALPELASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFE---NQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFDGGGQYM 593
            MK+ V    +  LA   +AF         A+     + R  +ST + AK V   E+SR+KLV+GIN VANAVKVTLGPKGRNVVLER YG PEIVNDGVTIAR+I LADPE NVGV+LVQEVA+KSD KAGDGTTTST+MTQAIVN GM+ VT+G NP+AL  GI   + ++   IK++++ +   +DL  +AT+A+ G+ +MG +IA+A++ VG++GSTV+EESQT+ DE+EFTEGL+IDRGY+SPYFVKDQERQ+ EL  PR+LVT+ KI  V+EI+PLLE + K+KEP+ ++AEDV G+ALSALVVNKMRGVLDVVAI+APGFG RRK  LQDIA+ATGAT+VAEEVG+TL+SVT +MLG A++ V+ K+ TTIVT     DA+  RI  IKRE +  D+ FD++KAQ+RVAALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+G+VP                            GA I+ +SLS P  Q+A+NAG++G +V+ +I E    + +G G++A+   Y +L+  GVVD AKV INA+ENSAS+A +VLTTECL+TEIP  +S +   + FD  G  M
Sbjct:    1 MKFHVTALSMVYLASECSAF--------TANSNSFQATRRLSSTALSAKRVSFKEESRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLADPECNVGVRLVQEVASKSDSKAGDGTTTSTIMTQAIVNNGMKAVTSGVNPIALNAGIKKSAGMVAAKIKELSQKINGVEDLQSVATIAS-GSVDMGRIIAQAFDKVGENGSTVIEESQTLFDEIEFTEGLTIDRGYISPYFVKDQERQVAELVNPRILVTDAKIDNVNEIVPLLEQLVKTKEPVLMIAEDVTGDALSALVVNKMRGVLDVVAIRAPGFGQRRKAYLQDIAIATGATYVAEEVGITLDSVTTDMLGTADRCVIAKELTTIVTDGKQEDAVIARIAQIKREGEEADTDFDRDKAQERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYIQDQFTDEILAAFDDEDQRAGAAILMKSLSEPCCQVAENAGVEGAVVLSKIVELTREKGFGHGWDASKNNYCDLMEAGVVDPAKVTINAVENSASVAGLVLTTECLVTEIPVFESEEDMQRRFDAEGMGM 587

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: GAX15522.1 (chaperonin GroEL [Fistulifera solaris])

HSP 1 Score: 617.1 bits (1590), Expect = 5.800e-173
Identity = 332/543 (61.14%), Postives = 417/543 (76.80%), Query Frame = 0

Query:   48 AKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFE---NQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD 587
            AK V   E+SRQ LV+GIN VA+AV+VTLGPKGRNVVLER YG PEIVNDGVTIAR+I L DPEQNVG KL+QEVA+KSD KAGDGTTTST+MTQA+VN GM+ VT+G NPV L RGI   ++V+ D IK++AKPV    DL ++AT+A+ G+ EMG +IA A + VGD+GSTVVEESQT+ DEVEFTEGL+IDRGY+SPYFVKDQERQ+ EL  P++LVT+ KI  V++I+PLLE I K+K+PL I+AEDV GEALSALVVNKMRGVLDVVAIKAPGFG+RR++  QDIA+ATGA+FVAEE+G+TL+SVT +MLG A+++V+ K+TTTIVT     +AI  RI  ++RE +  ++ +D EK  +R+A+LGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+G+VP                            GA I+ ++L  P MQ+A NAG++G +V+ +I E    + +G G++AA   Y +L+  GV+D AKV INA+ENSASIA +VLTTECL+TEIP   S +   + FD
Sbjct:   34 AKKVSFREQSRQALVDGINQVADAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIAREIVLRDPEQNVGAKLIQEVASKSDSKAGDGTTTSTIMTQALVNNGMKAVTSGVNPVGLNRGIRKAARVITDEIKRIAKPVSGIDDLKNVATIAS-GSIEMGRIIAMAADKVGDTGSTVVEESQTLVDEVEFTEGLTIDRGYISPYFVKDQERQVAELVNPKILVTDAKIDDVNDIVPLLEQIVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVIAKETTTIVTDGKQQEAIDARIAQLRREAENAENDYDAEKCTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYLQLTMEDKIMEAMDDEDEKQGAKILIKALGFPAMQVASNAGLEGAVVLAKIQELAMTKGFGHGWDAAAMEYCDLMERGVIDPAKVTINAIENSASIAGLVLTTECLVTEIPIEMSEEDKQRLFD 575

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BLAST of NO11G02260 vs. NCBI_GenBank
Match: GAX09481.1 (chaperonin GroEL [Fistulifera solaris])

HSP 1 Score: 616.3 bits (1588), Expect = 9.900e-173
Identity = 332/543 (61.14%), Postives = 417/543 (76.80%), Query Frame = 0

Query:   48 AKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFE---NQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD 587
            AK V   E+SRQ LV+GIN VA+AV+VTLGPKGRNVVLER YG PEIVNDGVTIAR+I L DPEQNVG KL+QEVA+KSD KAGDGTTTST+MTQA+VN GM+ VT+G NPV L RGI   ++V+ D IK++AKPV    DL ++AT+A+ G+ EMG +IA A + VGD+GSTVVEESQT+ DEVEFTEGL+IDRGY+SPYFVKDQERQ+ EL  P++LVT+ KI  V++I+PLLE I K+K+PL I+AEDV GEALSALVVNKMRGVLDVVAIKAPGFG+RR++  QDIA+ATGA+FVAEE+G+TL+SVT +MLG A+++V+ K+TTTIVT     +AI  RI  ++RE +  ++ +D EK  +R+A+LGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+G+VP                            GA I+ ++L  P MQ+A NAG++G +V+ +I E    + +G G++AA   Y +L+  GV+D AKV INA+ENSASIA +VLTTECL+TEIP   S +   + FD
Sbjct:   33 AKKVSFREQSRQALVDGINQVADAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIAREIVLRDPEQNVGAKLIQEVASKSDSKAGDGTTTSTIMTQALVNNGMKAVTSGVNPVGLNRGIRKAARVITDEIKKIAKPVSGIDDLKNVATIAS-GSIEMGRIIAMAADKVGDTGSTVVEESQTLVDEVEFTEGLTIDRGYISPYFVKDQERQVAELVNPKILVTDAKIDDVNDIVPLLEQIVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVIAKETTTIVTDGKQQEAIDARIAQLRREAENAENDYDAEKCTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYLQLTMEDKIMEAMDDEDEKQGAKILIKALGFPAMQVASNAGLEGAVVLAKIQELAMAKGFGHGWDAAAMEYCDLMERGVIDPAKVTINAIENSASIAGLVLTTECLVTEIPIEMSEEDKQRLFD 574

[Close]

BLAST of NO11G02260 vs. NCBI_GenBank
Match: OEU12386.1 (CPN60 protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 609.4 bits (1570), Expect = 1.200e-170
Identity = 335/581 (57.66%), Postives = 424/581 (72.98%), Query Frame = 0

Query:   10 IATLAVGTTAFLPPAALPELASVRGAVSRRGAASTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFE---NQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD 587
            ++ LA  +TAF P               + G ++  + AK V   E SR+ LV+GIN VA+AVKVTLGPKGRNVVLER YG PEIVNDGVTIAR+I L DPE+NVG KL+QEVA KSD KAGDGTTTST+MTQAIVN GMR VT+G NPVAL RGI     ++ + IK  A PV   +DL ++AT+A+ G+ +MG +IA+A + VG++GSTVVEESQT+ DE+EFTEGL+IDRGY+SPYFVKDQERQ+ EL  PR+LVT+ KI  V++++PLLE + KSK+PL I+AEDV GEALSALVVNKMRGVLDVVAIKAPGFG+RR++  QDIA+ATGA+FVAEE+G+TL+SVT +MLG A+++VV K++TTIVT   +   I  RI  ++RE D  D+ FDK+K  +R+A+LGGGIARIKVGAATETELKDKKLRYEDALNSV SA E+GVVP                            GA I+  +L AP MQ+A NAGI+G +++ +I      + + WG++A T  + +L   G++D AKV INA+ENSAS+A +VLTTECL+TEIP   S +   + FD
Sbjct:   11 VSVLATSSTAFAPS-------------QKFGKSAVVLEAKKVSFREDSRRALVKGINQVADAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAREIILRDPEENVGAKLIQEVAQKSDSKAGDGTTTSTIMTQAIVNNGMRAVTSGINPVALNRGIRKAGNLVSEKIKFHASPVTGIEDLKNVATIAS-GSVDMGRIIAQAADKVGETGSTVVEESQTLFDEIEFTEGLTIDRGYISPYFVKDQERQIGELVNPRILVTDAKIDNVNDVVPLLEQLVKSKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVVAKESTTIVTDGKHQKDIDARITQLRREADAADTDFDKDKFTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVDSARELGVVPGGGACLAHIQQMYTDEILEAMTDDDERSGAKILLEALGAPAMQVATNAGIEGAVILSKIRTLGVEKGFAWGWDAGTMEFCDLYERGILDPAKVTINAIENSASVAGLVLTTECLVTEIPIEMSEEDKQRMFD 577

[Close]

BLAST of NO11G02260 vs. NCBI_GenBank
Match: XP_002177543.1 (nuclear-encoded-like protein of chloroplast gro [Phaeodactylum tricornutum CCAP 1055/1] >EEC50357.1 nuclear-encoded-like protein of chloroplast gro [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 609.0 bits (1569), Expect = 1.600e-170
Identity = 322/548 (58.76%), Postives = 420/548 (76.64%), Query Frame = 0

Query:   43 STTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIV---VERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERKSLDQAAQDFD 587
            S  + AK V   E SR+ LV GIN VA+AV+VTLGPKGRNVVLER YG PEIVNDGVTIAR+I L DPE+NVG +L+QEVA KSD KAGDGTTTST+MTQA+VN GMR VTAG +PV L RG+   ++++ D I  +A PV   +DL ++AT+A+ G+ EMG +IA+A + VGD+GSTVVEESQT+ DE+EFTEGL+IDRGY+SPYFVKDQERQ+ EL  P++LVT+ KI  V++I+PLLE + K+K+PL I+AEDV GEALSALVVNKMRGVLDVVAIKAPGFG+RR++  QDIA+ATGA+FVAEE+G+TL+SVT +MLG A+++VVGK+ TTIVT     +AI  RI  ++RE +  ++ +D +K ++RVA+LGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+G+VP                            GA I+ ++++ P MQ+A+NAGI+G +V   ++ + E + +G+G++A +  Y +L+  G++D AKV INA+ENSAS+A +VLTTECL+TEIP + S +   + FD
Sbjct:   21 SFALHAKKVSFKEDSRRALVAGINKVADAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLRDPEENVGARLIQEVAAKSDSKAGDGTTTSTIMTQALVNNGMRAVTAGVSPVGLNRGLRKAARIIADEITAIATPVSGIEDLKNVATIAS-GSIEMGRIIAQAADKVGDTGSTVVEESQTLIDEIEFTEGLTIDRGYISPYFVKDQERQVAELVNPKILVTDAKIDDVNDIVPLLEQLVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTIDMLGTADRIVVGKEQTTIVTDGKQQEAIDARIAQLRREEETAETDYDADKCRERVASLGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAHLQITLKEKIMDAMETEDERQGALIMIKAMAYPAMQVAENAGIEGAVVLAKIQNLCEEKGFGYGWDAGSMEYCDLMERGIIDPAKVTINAIENSASVAGLVLTTECLVTEIPIQMSEEDKQRMFD 567

[Close]

BLAST of NO11G02260 vs. NCBI_GenBank
Match: XP_005708129.1 (chaperonin GroEL [Galdieria sulphuraria] >EME31609.1 chaperonin GroEL [Galdieria sulphuraria])

HSP 1 Score: 602.8 bits (1553), Expect = 1.100e-168
Identity = 316/531 (59.51%), Postives = 404/531 (76.08%), Query Frame = 0

Query:   46 MMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVTIARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXGADIVFRSLSAPVMQIAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVINALENSASIASMVLTTECLITEIPERK 577
            M  K +   E SR  L  GIN VA+AV++TLGPKGRNVVLER YG P++VNDGVTIARDI L+DP +N G +LV EVA+K+D KAGDGTTTS V+TQAIVNQG++ V++GAN +++RRGI   ++ +   I+++AKP+   +D+  IAT+A+GG+  +GA IA+AY  VG++GST VEESQ++ DEVE TEG+ +DRG++SPYFVKDQERQ+ EL +PRVLVT+ KIS V E++PLLE + KSKEPL I+ +D+ GEALS LVVNKMRGVLDV AIKAPGFGDRRK  LQDIA+ TGAT+V EE+G TL+ VT +MLG AE+VVVGK+ TTI+++  + + +K+RI  I++E++  DS+FD+EK ++R+A LGGGIARIKVGAATETELKDKKLRYEDALNS K A+E G+VP                           GA IV R+L AP++QIA NAG +G +V+  +   +E GWG+NAAT  Y NLL  G+VD AKVV  ALEN+ASIASMVLTTE L+ EIPE+K
Sbjct:   80 MGPKQIVFREDSRNALARGINAVADAVRITLGPKGRNVVLERSYGAPQVVNDGVTIARDISLSDPLENTGARLVVEVASKTDQKAGDGTTTSAVLTQAIVNQGLKIVSSGANAMSVRRGITKTAEYIVSEIRKVAKPLRGQEDIRAIATIASGGDETIGANIAEAYSRVGENGSTTVEESQSLMDEVEVTEGMELDRGFISPYFVKDQERQVAELTRPRVLVTDSKISVVQELVPLLESLVKSKEPLLIICDDLTGEALSTLVVNKMRGVLDVAAIKAPGFGDRRKAYLQDIAILTGATYVTEELGFTLDQVTLDMLGRAERVVVGKELTTIISTGEHQEGVKKRIAQIRKEIEDTDSQFDREKGEERIARLGGGIARIKVGAATETELKDKKLRYEDALNSTKCALEEGIVPGGGTLLAFLAQKVPDFEKTLHDEDERLGAQIVGRALEAPLVQIAMNAGKEGYVVLNEV-RKKELGWGWNAATDEYVNLLDAGIVDPAKVVCWALENAASIASMVLTTEALVVEIPEKK 609

The following BLAST results are available for this feature:

BLAST of NO11G02260 vs. NCBI_GenBank

BLAST of NO11G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24977.1	2.100e-284	94.09	chaperonin [Nannochloropsis gaditana]	[more]
CBJ29911.1	2.500e-184	62.54	chaperonin cpn60 [Ectocarpus siliculosus]	[more]
XP_009038899.1	2.500e-184	62.35	hypothetical protein AURANDRAFT_72012 [Aureococcus...	[more]
AFA52570.1	6.200e-183	61.16	chaperonin [Vaucheria litorea]	[more]
XP_002291674.1	6.200e-175	57.89	predicted protein [Thalassiosira pseudonana CCMP13...	[more]
GAX15522.1	5.800e-173	61.14	chaperonin GroEL [Fistulifera solaris]	[more]
GAX09481.1	9.900e-173	61.14	chaperonin GroEL [Fistulifera solaris]	[more]
OEU12386.1	1.200e-170	57.66	CPN60 protein [Fragilariopsis cylindrus CCMP1102]	[more]
XP_002177543.1	1.600e-170	58.76	nuclear-encoded-like protein of chloroplast gro [P...	[more]
XP_005708129.1	1.100e-168	59.51	chaperonin GroEL [Galdieria sulphuraria] >EME31609...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL115	nonsL115	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR010	ncniR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002028	NSK002028	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G02260.1	NO11G02260.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|542621	gene_5120	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100122g10	gene5510	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G02260.1	NO11G02260.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G02260 ID=NO11G02260|Name=NO11G02260|organism=Nannochloropsis oceanica|type=gene|length=2942bp
GGAACTTGGCCACCATTTTCCTGTGCAAGAAGTAAGAACGGGAGGAGTTG
CACTAGGATGAGAGGGGGAAGGCCGGCAATGATCGTGCGGGGTCATGTAT
CGGCGGCCTGCGGGCCTTTCACTAAAGATGTAGATGGACCTGGCGTTATT
GTATCAGCAGTTATGAAGAGGATTTTCAAACACCGTAAAGAGTAGCAGAA
TGCTTGTGCTTGGTAGAGGGCGCGGCAGGCGAGCTGCCGTGACCGTAGAG
GCGAGCACACCAACCTCAAATCAGTTCCAGAAACTTGTGCATTTTTCTAT
ACCATACTTACCTCCAAAACCCGCAACTGTGACCACCCATTTATCCTCCA
TCATCTCTTGGTTGTATCTGGGTGGTCTGGGTTTGCTCGAAGGCTGTGTA
TTTGAGTTGGCATGCTTTTGCTTAACTAGAGACGTAAGATACTCCCTCTC
TGTGTTGATGGACGAATGGCCTGCCTTGCGCACTGCAACTTGGCCTGATC
CACCATACATACATGCCGGCTACACAGACGACTGCCCTGAGGAGAAGCCA
ATGTATGTTTACAGTCGACTGCTGGCTTTTGCGGCGATGGGAGTGCACGG
TGCCATGTGCTATAGCCTCCCCACCAAAAGCTTGCCCCTAGCCGCTTATC
GTGCGACTGACCATCCCTTTCCATCCTTTCCACCCCGCGACCACCCACGA
CAGACTTCAGGAACATGAAGTGGGGCGTCCTTGGAGCAATCATAGCCACC
CTGGCCGTGGGCACGACTGCTTTTCTGCCGCCTGgtaagatatcgaattg
tttctcctcttcctcactctcaacctaggttttccagaaaaaattaacgc
cccataccccgtcaaccatcccccccccccttacagCGGCCCTTCCCGAG
CTGGCCAGCGTACGCGGTGCTGTGTCTAGACGGGGCGCGGCATCCACGAC
CATGATGGCCAAGAATGTGCGCCTGAGCGAGAAGAGCCGCCAGAAGCTGG
TGGAGGGGATCAACATTGTGGCTAATGCTGTCAAGGTAACCCTGGGACCG
AAGGGCCGCAACGTGGTGTTGGAACGCAAGTACGGTGTGCCTGAGATTGT
GAACGATGGTGTGACGATTGCCCGTGATATTGAGCTGGCAGACCCTGAGC
AGAATGTAGGGGTGAAGCTCGTGCAGGAGGTCGCTACCAAGTCCGACATG
AAAGCCGGCGATGGTACCACAACCTCCACCGTAATGACCCAAGCCATCGT
CAACCAAGGTATGCGCCAGGTGACGGCAGGTGCAAACCCCGTGGCTCTGC
GCAGGGGTATCATGCACTGCTCTAAGGTTCTGTGTGACACGATCAAACAG
ATGGCGAAGCCCGTGGAGAGCAATAAGGACCTTTTCGATATCGCCACTGT
TGCCACGGGCGGCAACGCGGAGATGGGGGCAGTGATTGCCAAGGCTTATG
AGTTGGTGGGCGACAGCGGCTCGACAGTCGTGGAGGAGTCTCAGACTGTG
CAAGACGAGGTGGAGTTCACGGAAGGGTTGAGCATCGATCGTGGATACGT
CTCTCCTTACTTCGTCAAGGACCAAGAGCGACAGCTGGTAGAGCTGCGTA
AGCCCCGCGTGCTTGTCACCGAGGGGAAGATTTCGGCGGTCCATGAGATT
TTGCCTTTGCTCGAACACATCGCCAAGAGCAAGGAGCCGCTGTTCATTGT
CGCTGAGGACGTTGCCGGGGAGGCTTTGAGCGCGCTGGTGGTGAACAAAA
TGCGTGGAGTGCTTGACGTGGTGGCTATCAAAGCACCTGGCTTCGGAGAC
CGACGCAAACAGCTGTTGCAGGATATTGCCGTTGCCACGGGTGCCACCTT
CGTTGCGGAGGAGGTGGGCGTGACACTTGAAAGTGTGACGCCGGAGATGC
TGGGTGTGGCGGAGAAGGTGGTAGTTGGGAAGGACACCACGACCATTGTC
ACCAGCAGTGGATATGCTGATGCTATCAAGGAGAGGATTCTGGCGATTAA
GCGCGAGATGGACTTGATGGACTCGAAGTTCGATAAGGAGAAGGCGCAGC
AACGTGTGGCGGCTTTAGGGGGGGGGATCGCTCGAATTAAGGTGGGGGCG
GCAACTGAGACGGAGCTGAAGGATAAGAAGCTCAGGTATGAGGACGCATT
AAACTCGGTGAAGAGTGCGATTGAGATGGGTGTTGTGCCGGGGGGAGGGT
CGACTCTGCTGTATATGCTTAAGAAGAGGGATGAAATGTTGGCTGCCATG
GACGATGATGACGAGAAGGCGGGTGCCGACATTGTGTTCCGCTCTTTGTC
GGCGCCCGTGATGCAGATTGCGCAAAATGCTGGCATCGATGGTGGGATTG
TGGTGGAGCGTATTTTCGAGAACCAAGAGTGGGGATGGGGCTACAACGCC
GCTACCGGCGTTTATGAGAACTTGTTGAGCACGGGCGTGGTGGACTCGGC
GAAGGTCGTGATTAATGCGTTGGAAAACTCGGCGTCGATTGCTTCGATGG
TGCTGACGACCGAGTGTTTGATTACTGAGATCCCGGAAAGGAAATCGTTA
GACCAGGCGGCCCAGGATTTTGATGGCGGAGGACAGTACATGTAAGGAAG
TGTCGAGGCCGAGAGGAAGGGGGGAAATAAGGGAGAGAAAGGAAAGGCTG
GCTGGCTAGAGAGGATTATTTGAGATGATGGAGAGAGTGGGTACGAGGGA
AGAGAGGAAGGGAGGGAGGGGTCATGTGCGTGGGTTGAGCGATCTGCTGT
GCGGCGTCACAGACTGGTGGCAGGCATTGCGGTTGTGTGGCTGGTGCACA
ATAGGGCTCGATAGGATTAATAGCAAGGCAGGGAGGGTTAAGCTACCAAC
ATAAAACGAGGGGGAAAGATGACATACCACACTGGAACCCCACCCTGCTC
TCTGCAGCACAAAGAAACAAGCCAAAAGACAGCGGAAATGCC

protein sequence of NO11G02260.1

>NO11G02260.1-protein ID=NO11G02260.1-protein|Name=NO11G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp
MKWGVLGAIIATLAVGTTAFLPPAALPELASVRGAVSRRGAASTTMMAKN
VRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLERKYGVPEIVNDGVT
IARDIELADPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMR
QVTAGANPVALRRGIMHCSKVLCDTIKQMAKPVESNKDLFDIATVATGGN
AEMGAVIAKAYELVGDSGSTVVEESQTVQDEVEFTEGLSIDRGYVSPYFV
KDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVA
GEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEV
GVTLESVTPEMLGVAEKVVVGKDTTTIVTSSGYADAIKERILAIKREMDL
MDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKS
AIEMGVVPGGGSTLLYMLKKRDEMLAAMDDDDEKAGADIVFRSLSAPVMQ
IAQNAGIDGGIVVERIFENQEWGWGYNAATGVYENLLSTGVVDSAKVVIN
ALENSASIASMVLTTECLITEIPERKSLDQAAQDFDGGGQYM*

Synonyms

Publications