NO11G02250, NO11G02250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02250 vs. NCBI_GenBank
Match: EWM24988.1 (20 kda chaperonin [Nannochloropsis gaditana]) HSP 1 Score: 395.6 bits (1015), Expect = 1.200e-106 Identity = 199/253 (78.66%), Postives = 220/253 (86.96%), Query Frame = 0 Query: 1 MVAKFPMRTCLLASLPLLLQAFLLS-SPQRQTAFSYSHRSAKTITQVHNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSKARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 M A +R C+ LP LL AF+L P ++T+FS KT+T+ HNLDG +IPGPL PLANVLLVKVKDA DMSAGGIVLPDQAKEKPTEGEV++AGPGR HPETAVLMPMPVKPG KVLYGKFDGMSV YDGAPHVLIRD+DILLTWTG MT+ AVETVRDRILVKVKKAQ+KSAGGILLAPSM+KARPTEGEVIKVGPGRIAS G+VAD+K+K GD VKFKDFAGTE+K++DENYLVMYSVDVLARW Sbjct: 1 MPAALALRACVFVCLPFLLGAFVLPLFPGQKTSFSARSSFPKTMTRAHNLDGQEIPGPLEPLANVLLVKVKDAEDMSAGGIVLPDQAKEKPTEGEVVAAGPGRQHPETAVLMPMPVKPGSKVLYGKFDGMSVIYDGAPHVLIRDDDILLTWTGSSMTLDAVETVRDRILVKVKKAQEKSAGGILLAPSMTKARPTEGEVIKVGPGRIASTGEVADVKVKPGDGVKFKDFAGTEIKIQDENYLVMYSVDVLARW 253
BLAST of NO11G02250 vs. NCBI_GenBank
Match: XP_002293810.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88819.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 212.2 bits (539), Expect = 1.800e-51 Identity = 112/239 (46.86%), Postives = 158/239 (66.11%), Query Frame = 0 Query: 15 LPLLLQAFLLSSPQRQTAFSYSHRSAKTITQVHNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSK-ARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 LPLL + LS Y+ S++T L+G +I G L P N +LVKV + + +AGGI+L AK K TEG VIS GPG+ H E+ +L PMPV PG+ V+YGK+DG + YDG H LIRD+DIL+ + G K+T+ V+ V D +LVKV Q+ ++GG+L+A + K ++P+ GEV+KVGPGR+ASNG++ + I GD VKF+DFAG EV++E E Y V+ D+LA++ Sbjct: 5 LPLL--SLALSQGTHAFTTPYTSLSSRTRPLSVKLEGREIDGVLTPTNNFVLVKVAEIEEETAGGILLTGSAKIKKTEGTVISTGPGKTHQESGILFPMPVTPGNGVVYGKYDGTEIVYDGDRHTLIRDDDILVKFDG-KLTLDNVDVVSDNVLVKVNDDQEATSGGLLIAATSKKGSKPSTGEVVKVGPGRMASNGEIMTVDISVGDEVKFRDFAGNEVQIEGEEYAVVRMTDILAKF 240
BLAST of NO11G02250 vs. NCBI_GenBank
Match: EJK46404.1 (hypothetical protein THAOC_34927 [Thalassiosira oceanica]) HSP 1 Score: 200.3 bits (508), Expect = 7.200e-48 Identity = 109/243 (44.86%), Postives = 153/243 (62.96%), Query Frame = 0 Query: 11 LLASLPLLLQAFLLSSPQRQTAFSYSHRSAKTITQVH---NLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPS-MSKARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVL 250 LLA + AFL S S S ++H LDG I GP+ PL N +LV+ KD+ D + GGI+LPDQ+KE+PTEGEV++AGPG+LHP T V + PV GD VL+GKFDG + Y+ P +IRD+D+LL + G +MT+ V RD +LV++ K + +++ GI++A S M + P EG+VIKVG GR+ S G+ +D + GD VKFKD+AG VK+E ++ VD+L Sbjct: 9 LLAVVAGTSSAFLQVGRTTLHQSSSSLSSTAVTEELHKQCTLDGKTIRGPITPLGNFVLVRTKDSLDATDGGILLPDQSKERPTEGEVVAAGPGKLHPHTGVRIVNPVSTGDSVLFGKFDGHDMEYNNEPVTMIRDDDVLLHYKGVRMTMENVSPCRDYVLVELTKQKAETSSGIVVAESVMKEYEPCEGKVIKVGEGRMTSKGEFSDSPVSVGDRVKFKDYAGNSVKIEGVECSLVRMVDIL 251
BLAST of NO11G02250 vs. NCBI_GenBank
Match: EJK64207.1 (hypothetical protein THAOC_15086 [Thalassiosira oceanica]) HSP 1 Score: 200.3 bits (508), Expect = 7.200e-48 Identity = 98/205 (47.80%), Postives = 139/205 (67.80%), Query Frame = 0 Query: 49 LDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSK-ARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 L+G +I G L P N +LVK+ D + GGI+L AK K TEG VISAGPG+ H E+ +L PMPV+ GD V+YGK+DG V YDG H LIRD+DIL+ + G K+T+ + + D +LVKV +++A G+L+A S K +P+ G V+KVGPGR+ASNG++ + I GD VK++DFAG EV +E + + V+ D+LA++ Sbjct: 38 LEGREIEGALTPTNNFVLVKIAPIEDETEGGILLTGSAKIKKTEGTVISAGPGKTHQESGLLFPMPVESGDGVVYGKYDGTEVEYDGDKHTLIRDDDILVKFKGDKLTLDTADVISDNVLVKVDDDGEETASGLLIAASAKKGGKPSTGTVVKVGPGRMASNGEIMTVDIGVGDMVKYRDFAGNEVTIEGDEFSVVRMTDILAKF 242
BLAST of NO11G02250 vs. NCBI_GenBank
Match: GAX18559.1 (chaperonin GroES [Fistulifera solaris]) HSP 1 Score: 197.2 bits (500), Expect = 6.100e-47 Identity = 103/225 (45.78%), Postives = 150/225 (66.67%), Query Frame = 0 Query: 31 TAFSYSHR-SAKTIT-QVHNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSKA-RPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 ++F +HR S TIT LDG I G + PL N +LVK A D + GGI+L +AK TEG V + GPG+ H ++ + + MPVK G+ V+YGKFDG + DG PH LIRD+D+L+ + G ++T+ +V+ V D +LV V ++ + GGILLA S S+ R + GEV+KVGPG++ASNG++ + + GD VKF+DFAG EV++E + Y V+ VD+LA++ Sbjct: 17 SSFLVAHRPSTSTITCHAAKLDGRKIKGDVVPLNNFILVKKAPAQDKTEGGILLTGKAKIVKTEGTVQAVGPGKTHQDSGITVQMPVKTGESVVYGKFDGTEIDLDGQPHTLIRDDDVLVKFHGDQLTLESVDVVFDNVLVAVDSSESATEGGILLAKSSSQTKRASTGEVVKVGPGKMASNGELMTMDVAPGDMVKFRDFAGNEVEIEGKEYSVVKMVDILAKY 241
BLAST of NO11G02250 vs. NCBI_GenBank
Match: GAX25044.1 (chaperonin GroES [Fistulifera solaris]) HSP 1 Score: 194.5 bits (493), Expect = 3.900e-46 Identity = 99/225 (44.00%), Postives = 148/225 (65.78%), Query Frame = 0 Query: 31 TAFSYSHRSAKTITQVH--NLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSKA-RPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 ++F +HR + + H LDG I G + PL N +LVK A D + GGI+L +AK TEG V + GPG+ H ++ + + MPVK G+ V+YGKFDG + DG PH LIRD+D+L+ + G ++T+ +V V D +LV V ++ + GGILLA S S+ R + GEV+KVGPG++ASNG++ + + GD +KF+DFAG EV++E + Y V+ VD+LA++ Sbjct: 17 SSFLVAHRPSTSTIICHAAKLDGRKIKGDVVPLNNFILVKKAPAQDKTEGGILLTGKAKIVKTEGTVQAVGPGKTHQDSGITVQMPVKVGESVVYGKFDGTEIDLDGQPHTLIRDDDVLVKFHGDQLTLESVNVVFDNVLVAVDSSESATEGGILLAKSSSQTKRASTGEVVKVGPGKMASNGELMTMDVTPGDMIKFRDFAGNEVEIEGKEYSVVKMVDILAKY 241
BLAST of NO11G02250 vs. NCBI_GenBank
Match: XP_002185710.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65180.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 186.4 bits (472), Expect = 1.100e-43 Identity = 104/246 (42.28%), Postives = 158/246 (64.23%), Query Frame = 0 Query: 10 CLLASLPLLLQAFLLSS--PQRQTAFSYSHRSAKTITQVHNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMS-KARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 C SL ++ AF +S P + AFS + SA T LDG I G + PL N +LVK+ +A + + GGI+L +AK K TEG V++ GPGR H ++ ++ MPV G V+YGKFDG + GA HVLIRD+DIL+ +TG +++ +V+ VRD +LV V+ + ++ GGIL+A S S +P+ G V+KVGPG++AS+G + + + D VKF+DFAG +V+++ + Y V+ D+LA++ Sbjct: 5 CAAISLLVIESAFGFTSLAPGSRPAFSLTQCSATT------LDGRKITGDVKPLNNFVLVKIGEAREQTEGGILLTGKAKIKKTEGTVVAIGPGRTHQDSGIVFDMPVSEGQGVVYGKFDGTEINIGGAKHVLIRDDDILVKFTG-DLSLDSVDMVRDNVLVYVENDESETDGGILIAKSSSADKKPSTGIVVKVGPGKMASDGSLMSMDVAVDDMVKFRDFAGMDVEIDGKEYSVVKMADILAQF 243
BLAST of NO11G02250 vs. NCBI_GenBank
Match: CBJ27594.1 (chaperonin [Ectocarpus siliculosus]) HSP 1 Score: 176.0 bits (445), Expect = 1.500e-40 Identity = 84/200 (42.00%), Postives = 131/200 (65.50%), Query Frame = 0 Query: 54 IPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMS-KARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 I PL P+ N +LVK+ A +AGGIVLPD+A++ P EG V++ GPGR HP T L+PM V GD VL+ ++ G V Y G H+ I D+D++L + GP++T +++ VRD++LV +K + ++ GI++A S + K + ++G V+ +G GR S G++ KAGD+VKF ++A E+K++ Y V+ VD +ARW Sbjct: 73 IDKPLQPVGNYILVKMFAAVSRTAGGIVLPDEAQDVPCEGLVVAHGPGRTHPLTGTLIPMCVSEGDTVLFSRWSGRKVKYCGEDHMFIMDDDLVLVYRGPELTEDSLKMVRDQVLVVTEKGESETDAGIVIAASTAEKEKASQGRVVAIGEGRTGSTGEIVPCPFKAGDNVKFMEYAPVEIKIKGSYYAVVRMVDCIARW 272
BLAST of NO11G02250 vs. NCBI_GenBank
Match: OEU18977.1 (GroES-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 174.5 bits (441), Expect = 4.200e-40 Identity = 88/206 (42.72%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 47 HNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSA---GGILLAPSMSKARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVL 250 + LDG +I GP+ PL N +LVKVKD ++GGI+LPDQ+KE+PTEG VI+AGPG++HP TA+ + P+K G VLYGK+DG ++ Y+ +IRD+D LL + G M + V VRD +LV + + + A G ++ + ++ P EG V+K+G GR+ S+G+++ K G+ +KFKD+AG +V + + Y V+ +V++L Sbjct: 59 YTLDGDEIRGPITPLRNFVLVKVKDTLTATSGGILLPDQSKERPTEGLVIAAGPGKIHPFTAIRIDNPIKEGMSVLYGKYDGKAIVYNDDSCQMIRDDDCLLYYNGITMKLDNVFPVRDYVLVALDEDPESLATKSGVVIASQVVADDVPCEGTVVKLGEGRMNSSGKLSPSPAKVGERIKFKDYAGNDVNINGKPYSVVKNVNIL 264
BLAST of NO11G02250 vs. NCBI_GenBank
Match: XP_009035715.1 (hypothetical protein AURANDRAFT_63307 [Aureococcus anophagefferens] >EGB09668.1 hypothetical protein AURANDRAFT_63307 [Aureococcus anophagefferens]) HSP 1 Score: 163.7 bits (413), Expect = 7.500e-37 Identity = 90/242 (37.19%), Postives = 141/242 (58.26%), Query Frame = 0 Query: 11 LLASLPLLLQAFLLSSPQRQTAFSYSHRSAKTITQVHNLDGVDIPGPLNPLANVLLVKVKDAADMSAGGIVLPDQAKEKPTEGEVISAGPGRLHPETAVLMPMPVKPGDKVLYGKFDGMSVAYDGAPHVLIRDEDILLTWTGPKMTVAAVETVRDRILVKVKKAQDKSAGGILLAPSMSKARPTEGEVIKVGPGRIASNGQVADIKIKAGDSVKFKDFAGTEVKLEDENYLVMYSVDVLARW 253 LLA L + A + ++ R+ A + + RSA H ++ ++ GPL PL+N LLVKV D S GGI+L A E + GEV+SAGPGR PE+ VL+P+ GD+V++G++ G +V YD A H L++D D+ + WTG + +V + +LVKV + +A G+LL GEV++VGPG++ G + + AGDSV+F+D+ EV ++ E Y ++ + V+ +W Sbjct: 773 LLALLAVAGDALVATT--RRAAPAVARRSA-----THTIEAREVEGPLEPLSNYLLVKVDPIKDTSGGGIIL-GSASEPASTGEVVSAGPGREDPESGVLLPVQCAVGDRVMWGRYSGANVRYDNADHTLLKDRDVSMVWTG-DLAADSVRPIGSNVLVKVSENAGATASGLLLGLGAQDKISLTGEVVQVGPGKLLRGGGRGPVPVAAGDSVRFRDYDVVEVVIDGEEYALVGTEHVICKW 1005 The following BLAST results are available for this feature:
BLAST of NO11G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02250 ID=NO11G02250|Name=NO11G02250|organism=Nannochloropsis oceanica|type=gene|length=2472bpback to top protein sequence of NO11G02250.1 >NO11G02250.1-protein ID=NO11G02250.1-protein|Name=NO11G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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