NO11G02180, NO11G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G02180 vs. NCBI_GenBank
Match: EWM19967.1 (hypothetical protein Naga_102579g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 278.9 bits (712), Expect = 2.100e-71 Identity = 133/198 (67.17%), Postives = 160/198 (80.81%), Query Frame = 0 Query: 135 RDVVPKARGLVSMVYKSHIANQNYHESANFFLVTYRDPYDMVCSMAKMFRPIFLTDFAQALHSCHTMAQNERRINELAEAAGPGNALFVHHSALHTLEGMTEVVEAMARMWKVQGGVVDARGVAREVLELQSPPPGVFPVAHPRSELHANHITQSNNTQQDCAPMREALEADERCSAWHRRYERMFPPGTTELVRDSL 333 RDVVPKA+G VSMVYKSH A+Q YH SA+FFLVT+RDPYDMVCSM MFRP+F TDF +A+ SC MA NE+RI L A+ G+AL VHHSAL++ E M +VVEAMA W V GG +DARGVAREVLEL++PP G+FPVAHPR+ELHA+HIT S++T++DC +R ALEAD C AWH RYE+ FPPGT +LVRDS+ Sbjct: 1 RDVVPKAKGQVSMVYKSHWADQEYHNSADFFLVTHRDPYDMVCSMGNMFRPVFFTDFKRAISSCRGMADNEKRI--LRVASKSGSALHVHHSALYSAESMAQVVEAMALKWNVTGGKIDARGVAREVLELRAPPEGIFPVAHPRTELHADHITASSSTKKDCTELRRALEADSVCRAWHDRYEQSFPPGTAQLVRDSI 196
BLAST of NO11G02180 vs. NCBI_GenBank
Match: EWM24604.1 (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 256.5 bits (654), Expect = 1.100e-64 Identity = 123/248 (49.60%), Postives = 166/248 (66.94%), Query Frame = 0 Query: 81 PRLAAPLIVACLANMRTVSTTAYNLARVLMERVDPNSASGWEKDVTGTNTDILIRDVVPKARGLVSMVYKSHIANQNYHESANFFLVTYRDPYDMVCSMAKMFRPIFLTDFAQALHSCHTMAQNERRINELAEAAGPGNALFVHHSALHTLEGMTEVVEAMARMWKVQGGVVDARGVAREVLELQSPPPGVFPVAHPRSELHANHITQSNNTQQDCAPMREALEADERCSAWHRRYERMFPPGTTELV 329 PRL +PL VACL++ RTVSTTA+NL R+LMERVD NS SGWE DV G+ + + D++PK G VS VYKSH +H+ A+F +VTYRDPY+++CSM +MF+P +A+ C MA+NE I + A G +L ++ L + EGMTEVV + W VQGG +D R + REV++L+SPP GVF VA+PRSELH +HIT S +T+ DC ++E L D+ C AWH Y MFP G+ ++ Sbjct: 94 PRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWAGREGT-RSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITGSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSIL 340
BLAST of NO11G02180 vs. NCBI_GenBank
Match: EWM24996.1 (hypothetical protein Naga_100068g30, partial [Nannochloropsis gaditana]) HSP 1 Score: 115.5 bits (288), Expect = 3.100e-22 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 0 Query: 5 RNWPVNYSASRMVLVLLSLIFGAQLVIIARYEKPSPATTTAAVAGQDV-AAPAAVSLTADASTSSQSSSLDTVDPPLPRLAAPLIVACLANMRTVSTTAYNLARVLMERVDPNSASGWEKDVTGTNTDIL 134 R W S +L LL LIF AQL II ++++++ AG++ A P SL A++ S S ++ DPPLPRL+ PLIVACLANMRTVSTTAYNLARVLMERVDPNS SGWEKDVTG+ IL Sbjct: 3 RRWASKQKPSSQLLSLLGLIFCAQLYIIFH------SSSSSSCAGKEQHAIPTPASL---AASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSKKRIL 123
BLAST of NO11G02180 vs. NCBI_GenBank
Match: EWM24994.1 (hypothetical protein Naga_101727g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 102.8 bits (255), Expect = 2.100e-18 Identity = 64/120 (53.33%), Postives = 78/120 (65.00%), Query Frame = 0 Query: 5 RNWPVNYSASRMVLVLLSLIFGAQLVIIARYEKPSPATTTAAVAGQDVAAPAAVSLTADASTSSQSSSLDTVDPPLPRLAAPLIVACLANMRTVSTTAYNLARVLMERVDPNSASGWEKD 125 R W S +L+LL LIF AQL II +++++ + A P SL A++ S S ++ DPPLPRL+ PLIVACLANMRTVSTTAYNLARVLMERVD NS SGWEK+ Sbjct: 25 RRWTSKQKPSSQLLLLLGLIFCAQLYIIFH------SSSSSCAGKEQHAIPTPASL---AASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKN 135 The following BLAST results are available for this feature:
BLAST of NO11G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02180 ID=NO11G02180|Name=NO11G02180|organism=Nannochloropsis oceanica|type=gene|length=1223bpback to top protein sequence of NO11G02180.1 >NO11G02180.1-protein ID=NO11G02180.1-protein|Name=NO11G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=337bpback to top Synonyms
Publications
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