NO11G02030, NO11G02030 (gene) Nannochloropsis oceanica

Overview
NameNO11G02030
Unique NameNO11G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4722
Alignment locationchr11:648300..653021 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:648300..653021 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO11G02030 vs. NCBI_GenBank
Match: EWM25005.1 (hypothetical protein Naga_100068g12 [Nannochloropsis gaditana])

HSP 1 Score: 81.3 bits (199), Expect = 2.800e-11
Identity = 87/201 (43.28%), Postives = 122/201 (60.70%), Query Frame = 0 
Query:   78 ERLKFQLEWQEGERKRTVEQMTKLRRDAEAARQETARLQAVVVQREKALTDARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQCQLQACETELSSLTNQLLEAKDANAEAEAYIRELKEEKKLRQGYEEGSVLPEWQSLSKGLQ--RAQYTRRAMHGILANLEGALTEFRRHEAAGALDARLIEASVA 277
            +R K  L+WQEGERKR   QM KL R+AE +RQE AR+Q ++ QREK   D +R+       XXX XXXXXXXXXXXXXXXXXXXXX       L+ +L    TE+ +L+  L + KDA A+ E  +R+L+EEK   Q  +   VL EW+ L+K ++  + Q+ +R  H  +A LE A+ E ++     A + ++    +A
Sbjct:   19 DRCKSLLDWQEGERKRAAVQMAKLGREAEFSRQEVARMQTLLAQREKEFQDFQRQSAKTLMEXXXGXXXXXXXXXXXXXXXXXXXXXALQERVRLELKLDVKATEMMNLSKDLFDCKDAKADIEKSMRQLREEKHFWQRQDGDQVLLEWEGLAKEMRAMQGQWGQREEH--VARLEKAMEEQKQQIEENARELQVASDRIA 217

HSP 2 Score: 65.1 bits (157), Expect = 2.100e-6
Identity = 104/250 (41.60%), Postives = 129/250 (51.60%), Query Frame = 0 
Query:  929 AYQLGEAREDVRRLSGEVEEMMARL-----EGANEEGWDGRSRK-KGEAMLTDQLERAHKTIETLEMQVGEVRREAELGERELVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVVSLSRRIGLLEKERMESQTRYFERLSRMTEES---------XXXXXXXXXXXXXXXXEGVNTTVPSKVSPLFLAELGRLQQALEESEEDRLTLEQQLVDVLREREELFGLCGLLRHEL 1164
            A +L + REDVR LS EVE +  +      +GA E   D + R+ +       Q E AH  I  LE ++   + EA+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               R+V+LSRR G L+KER++SQ      L    +E                          +  N        P  LAE+ RLQ+A EES EDR+TLEQQL DVLREREEL G   L+ +E+
Sbjct:  454 ALELQKEREDVRVLSREVEFLTQQTGATLPKGAFEARGDEQDREGQVHGDWKHQSEGAHTRIGQLEWELARAQEEADEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEMKRIQAVSDERERRLVALSRRTGFLKKERVDSQGGLCPTLPHRKDEEKNTGNVCELTKEGVFGSQEMANESTDAANGDGKPAGPPGLLAEVRRLQEAFEESVEDRVTLEQQLADVLREREELIGGSRLMGNEV 703
The following BLAST results are available for this feature:
BLAST of NO11G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25005.12.800e-1143.28hypothetical protein Naga_100068g12 [Nannochlorops... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002057NSK002057Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02030.1NO11G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630783gene_5093Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100068g12gene5485Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02030.1NO11G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02030 ID=NO11G02030|Name=NO11G02030|organism=Nannochloropsis oceanica|type=gene|length=4722bp
AAAGGCATTACGGAGACGACAAGCTCGAGACCTGCTGCCAAGGCCTTTCC
GTTCCAACGGCAAATGAGGGAGAGGTAAAACAAGCAAGCAAGCCATCGAC
CTCCCACCATCCCCATCTTCCCGCGCAGCAGCAATGTGGAGTCTGTTGCA
GCAGCGTCAACCACCCGCATCCACTTCTACCCTCCTCCGGCGGGCGCCCG
TAAGCAGCAATACAAGTACGGGCAGCAGTACGTGGAGCAATAGTGGCTGC
AGACAAGACGAAGCATCATCTTCTGGTGCTGACTTTCCCTCTCCATCGTA
CCATGAGACACCCGACTCGACTGCATGGAGCGAGCGGCGTGTCCGCGAGC
AGGCACAAGCTGCAGAACGCTTGAAATTTCAACTTGAGTGGCAGGAGGGC
GAGCGTAAGCGGACCGTGGAGCAAATGACCAAATTGCGACGCGATGCCGA
GGCAGCCCGCCAAGAAACCGCACGTTTGCAAGCCGTGGTGGTCCAACGCG
AGAAGGCCCTGACGGACGCCCGACGGGAAGCTACAAAAAATGAGCTCGTA
GAAAACGAAAGACGACAAAGTGAAAAAGGGGAATATGAGCAAGTCGCCGC
AAAGGAGCACGCGGAAAAAGAGCAGCTGGCACAGGAAAAAGCCCGACTCC
AATGCCAGCTACAGGCCTGTGAGACCGAGCTCTCGAGCTTGACAAATCAG
CTTCTGGAGGCCAAGGATGCCAACGCAGAAGCTGAAGCATATATTCGAGA
ATTAAAGGAGGAGAAAAAGCTGCGCCAGGGGTATGAGGAAGGGAGCGTGT
TGCCGGAGTGGCAAAGCCTTTCCAAAGGGCTGCAGCGGGCGCAGTACACG
CGTCGGGCCATGCATGGGATTTTGGCCAATTTGGAGGGAGCACTGACTGA
GTTTCGACGCCACGAAGCTGCGGGAGCATTAGATGCGCGGCTGATTGAAG
CCTCCGTGGCAATGAGTGCTTCTACTGCCACTGCAACTCCAACTGATCCT
GCCGCTGCCAAACCTGATGGTGCCACCACCAAGAGCACGTGGGAGGGTTT
AACCCAAGACATTCGACGACTACTCGGAAATGCCACGAGGCTCTATCCCT
GTCTCTTGGATGAAATCGAGGCCGGCAAACGCGAGAGCGAAGTCCTAAGC
ACTGAGCTCGAAGACTTATTAGCCCGAGTCAATGGCGGGGTCTCTCGTTG
TGTCTCCACTCCCTCTGCTCTACCTCCTGACCCTCATCGCCTGCGTCGTC
CTAAAGCAGGGAAAGTAGCAGTAGCAAGAGCAGCTGCAGGAAGAGTAGGA
GGAGAAGGAGGAGTGGCAGTGGAGAAAAAAATGCAGTTGGTAGAGCATGT
GGCGGACGAGACAGCGCATTTGCTGCGAGGGATGGCTCGAGGGCACATAC
AGCGGATGCAGACTCTCCTCAAGGCAACGGAAAGCCGACAGGCTGACCTG
GTCACGGAGAACAAGGAATATAAACGGCAGGCGGCAAAGAGAGTGATGGA
AGCGGAGGAGGCTGGTCGGGCACGTGTGGCGGCGGAGGAGGCGATGAGGG
TAATGCGGGAGGAATGGGAGAGGAGGGAGCTACGCTTGGTGGCAGCAGAG
AGAAGGGTGGTGGAGCTTGAAATGTTGTTGGAAGAACAGCAACAGGTACT
GGAGAGTAGTGTACACGACGCTGTCAGCTTGAGGGAGGAAGGACAGGAGC
TGCGCACGGCGTTGACAAAGGGGGAAGAGAAGCAAACTCAGTTGGAAGAG
CTGCTGGCGGTGCAAAATCAAGGGTTACAGCAGGCGACGGCGGAGCTGGC
CGAGCGGAGAGAGGATGTACAAAGGCTTCTGGACGGCATGGAGGGGGCTG
ACGCCGCGGTTGAGACAAGCAGGCATCGAGAGGAAGATGCGCTTCAGCGG
TTGGAGGCAGCAGGGGAGGAAATCTCTTTTTGGGCGGGGCAGGCGGGGGA
GGAGGAGGGAAGGAGGGGAAGGATGGAGGAATGGATAATGCAATACCTAA
AGAAGGAGAGGAGAAGGAGGACGATGGGGAGGGTGTGGCAGGCTTGGCGT
TGGGAGGCGGTGCAGGAGACAGTAAGAAAGTTACATGAAAAGTTGAGGGA
GACGGAAGCACGTTTGGGCTTGTCGGAGGAGCAACACGAGGAAGCGGAGG
AGAGGTGGCAAGAGGAGTGTCTGGCTCGCGAACGGCTAGCAAACCAGAGT
GCAGTGCTTTTGGATCAAAGTGACCACCAGCACAAGGAACGCATGGTGTT
GGTTGCATGGAGGATGCGGGCACGAGAAATGAGGGATCGACGGAGAGATT
TACACAATTATTTAAAGCAGTTTGTCTTGCGAAAGCGCCTGGCAGCTGCA
CATGTGGTGGCCGAGGGGTTTGAAACAAAAGTGGGGGAATATGCGCGTGC
GCTTGAGGAGGTGATGGGGGAGAGGAAGGGGGAGAGGGAGGCAGCGGCTT
TGGAATTGGCGGAGGCAAAAGCTGTCGTCATTGAGAAGGAGGAGGAAGTA
ATGGGATTGAATGAGAGGTTGGAGAGAGAAAAAGGGATGGAGGAGCAGGT
GAGGGCAAGGGAAGTGGAGGTGGCTGAGCTGCAGCAGCAGTTGGAAGAGT
TTCGAGAAATGAAGCGGGAGCTGGATGAGGAGGTGCTTGCGATGCAGCAG
CAGCAACAGTACCAGGAGGAGCAACAGCAGCAGGGCCGATATTTTCATAA
CGGTGCAAGTGAGGTTGATGGGGATGGAGAGGAGCTGCATCAACACCAAG
CGGAGCAGCAGCAGCAACAGCAGCAGCCATTGTCGTCTTTGCCGATACCC
AGTCCAGCTGCAGGCGACCTCCCGCAAGGCAGCAGCAGCAGCGGCAGCGG
CAGTCGTAGCGCGGTGGCTTTCCTGGTGGTACGTGTCCGGCGAGCAGAAA
AGGAGAAGCTGGAGCTGGCCTATCAACTAGGAGAGGCACGAGAAGATGTG
CGACGATTGTCAGGGGAGGTGGAGGAAATGATGGCCAGGTTGGAGGGAGC
GAATGAAGAGGGGTGGGACGGGAGGTCGCGGAAAAAGGGGGAGGCGATGT
TGACAGATCAACTTGAGAGGGCCCATAAAACGATTGAAACGTTGGAGATG
CAGGTGGGGGAGGTGAGAAGGGAGGCAGAGTTGGGGGAAAGGGAACTGGT
AGGAGCGTTAGAGGACGTAGAGACGTTAGAAGAGCAATTAAAGGCGCAAA
ATGAAACGGTGCGGCAGTTGGAAGAAACGGGCAGGGTGCTAGAAGAAGAG
CTGGGGAGGGTGAGGGCTGCTGGGAAGGTGAGAGAGGGGAGAGTGGTAAG
TTTGAGTCGACGAATTGGCCTGTTGGAAAAGGAGAGGATGGAAAGTCAAA
CGAGGTATTTTGAAAGGCTTTCTAGGATGACGGAGGAAAGCGAGGAGGGG
AAAGAGGAGGAAAGAGGGAGGGAGGGTGTGGAAGAAGGAGAGGGAGTTAA
CACGACGGTGCCATCGAAGGTCTCGCCATTGTTCTTGGCGGAGTTGGGGC
GGTTGCAGCAAGCTTTGGAGGAATCGGAGGAGGATCGATTGACCCTGGAG
CAGCAGCTGGTGGATGTGTTGAGGGAGAGGGAAGAGCTGTTCGGGCTTTG
TGGTTTATTGAGGCATGAGTTGGTAGAGGCTGCTACGCCAGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTCGTCATGACAATGCTGTT
GCTACCGCTGCTACTACTACCACCGCTGCTACCGCCGCCTCTACTACACC
CATTGCAGCGTCGTCGTCGACACGCCAACAACATCACCAACTCTTCTTCC
AGCCACAAACCCCCACACTACTGCATTCCCCTCCTCCTTCCTCCCCCCCT
TCTGTCACGGCTGCTGTTGCTGCTAATCGTGCTCTAGATCGAGAACGCGA
GAGAGAAACAGTTGTGCGGTCCGCCCAAGATTTACATTGGGCAGTGCGAC
GATCGCAGGAACGGTTAGAATATTTGTTGGATGAAGGATGTCAGGTTACA
GAGGGGTTGATAAAGGTGGGGAAAGAGAGAAAGGGAGCAAGGAAGGGGAG
AAAGGAGAGGAGGGCGGAGGAATCGATGGTGGTGAAGGAGGAGGAGGGGG
TGGAGGAGGAGGAGGGGAGGAGGCGGAGGAGGAGAAAGAAGGAAAGGAGG
GATAAAGATGATCATTTCCATCATCACCGTCGCCGTATGCGACGCGACAA
ACATCAAGCAGAGACAAAAGCTGATGAGAACGAAAACGAGGAAGAGGAGG
AGGAAAGGGCTGATGATGCGCGAGAAGAGCTTCGGGATTTGATCCAGAGC
ACGCAGAAAGAGGTGGATGCCGCGGCAGCTGAGAATGCTGGACCAGTAAA
TGATGTGTTGGTTGATTATTTGAAGACATTGAAAGTGTCCCTTGGTCGAT
TGGAGGGGAATCGAGAAAGGGGGAGGAAGGAGCAGGAGGAGGGAGCGGAG
GAGGAAGTGAAGGAGGAATAGGGAAGATCAGTCGGAGAGATGGAAACGTG
AGCCATACTCCTCCTTTCGTGTGTATGTATATGCTTGTATTTGTGTGTGT
TGTGCTGCATGAGTGTATTTATAGTCCAGACGCCGGTACAAAGAATCACG
ACCAAGAATAAAGTCACAGCAGCCCATAAGAACGAAATCTATGAAAAAGA
AGCGAAGGACAAAGGCAAAGGCCATGACGAGTACAAATACAGGCCGTTTA
CCCTGAAATTTGTGTAAAAAGA
back to top

protein sequence of NO11G02030.1

>NO11G02030.1-protein ID=NO11G02030.1-protein|Name=NO11G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1446bp
MWSLLQQRQPPASTSTLLRRAPVSSNTSTGSSTWSNSGCRQDEASSSGAD
FPSPSYHETPDSTAWSERRVREQAQAAERLKFQLEWQEGERKRTVEQMTK
LRRDAEAARQETARLQAVVVQREKALTDARREATKNELVENERRQSEKGE
YEQVAAKEHAEKEQLAQEKARLQCQLQACETELSSLTNQLLEAKDANAEA
EAYIRELKEEKKLRQGYEEGSVLPEWQSLSKGLQRAQYTRRAMHGILANL
EGALTEFRRHEAAGALDARLIEASVAMSASTATATPTDPAAAKPDGATTK
STWEGLTQDIRRLLGNATRLYPCLLDEIEAGKRESEVLSTELEDLLARVN
GGVSRCVSTPSALPPDPHRLRRPKAGKVAVARAAAGRVGGEGGVAVEKKM
QLVEHVADETAHLLRGMARGHIQRMQTLLKATESRQADLVTENKEYKRQA
AKRVMEAEEAGRARVAAEEAMRVMREEWERRELRLVAAERRVVELEMLLE
EQQQVLESSVHDAVSLREEGQELRTALTKGEEKQTQLEELLAVQNQGLQQ
ATAELAERREDVQRLLDGMEGADAAVETSRHREEDALQRLEAAGEEISFW
AGQAGEEEGRRGRMEEWIMQYLKKERRRRTMGRVWQAWRWEAVQETVRKL
HEKLRETEARLGLSEEQHEEAEERWQEECLARERLANQSAVLLDQSDHQH
KERMVLVAWRMRAREMRDRRRDLHNYLKQFVLRKRLAAAHVVAEGFETKV
GEYARALEEVMGERKGEREAAALELAEAKAVVIEKEEEVMGLNERLEREK
GMEEQVRAREVEVAELQQQLEEFREMKRELDEEVLAMQQQQQYQEEQQQQ
GRYFHNGASEVDGDGEELHQHQAEQQQQQQQPLSSLPIPSPAAGDLPQGS
SSSGSGSRSAVAFLVVRVRRAEKEKLELAYQLGEAREDVRRLSGEVEEMM
ARLEGANEEGWDGRSRKKGEAMLTDQLERAHKTIETLEMQVGEVRREAEL
GERELVGALEDVETLEEQLKAQNETVRQLEETGRVLEEELGRVRAAGKVR
EGRVVSLSRRIGLLEKERMESQTRYFERLSRMTEESEEGKEEERGREGVE
EGEGVNTTVPSKVSPLFLAELGRLQQALEESEEDRLTLEQQLVDVLRERE
ELFGLCGLLRHELVEAATPAAAAAAAAAAAAAARHDNAVATAATTTTAAT
AASTTPIAASSSTRQQHHQLFFQPQTPTLLHSPPPSSPPSVTAAVAANRA
LDRERERETVVRSAQDLHWAVRRSQERLEYLLDEGCQVTEGLIKVGKERK
GARKGRKERRAEESMVVKEEEGVEEEEGRRRRRRKKERRDKDDHFHHHRR
RMRRDKHQAETKADENENEEEEEERADDAREELRDLIQSTQKEVDAAAAE
NAGPVNDVLVDYLKTLKVSLGRLEGNRERGRKEQEEGAEEEVKEE*
back to top
Synonyms
Publications