NO11G02000, NO11G02000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02000 vs. NCBI_GenBank
Match: KUF77692.1 (Ribulose-phosphate 3-epimerase [Phytophthora nicotianae]) HSP 1 Score: 338.2 bits (866), Expect = 2.100e-89 Identity = 164/233 (70.39%), Postives = 189/233 (81.12%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+V+LVDMVL+MTVEPGFGGQ F ADMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 1 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPFVELVDMVLVMTVEPGFGGQSFMADMMPKVEAIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAADPMAVILQMRHSVEKYGNGKSDDQLTKL 232
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_008895406.1 (ribulose-phosphate 3-epimerase [Phytophthora parasitica INRA-310] >ETN19574.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica INRA-310]) HSP 1 Score: 336.7 bits (862), Expect = 6.000e-89 Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+V+LVDMVL+MTVEPGFGGQ F DMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 32 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPFVELVDMVLVMTVEPGFGGQSFMTDMMPKVEAIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAADPMAVILQMRHSVEKYGNGKSDDQLTKL 263
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_002907019.1 (ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4] >EEY66420.1 ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]) HSP 1 Score: 333.2 bits (853), Expect = 6.700e-88 Identity = 162/233 (69.53%), Postives = 187/233 (80.26%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+VDLVDMVL+MTVEPGFGGQ F DMM KV ++R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ VI +R +VE+ GNGK +++LT L Sbjct: 1 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRAKYPALDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAEDLTAVILQMRHSVEKYGNGKSDDQLTKL 232
BLAST of NO11G02000 vs. NCBI_GenBank
Match: CCI40764.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 332.0 bits (850), Expect = 1.500e-87 Identity = 159/225 (70.67%), Postives = 185/225 (82.22%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGK 226 MCHSC+C IGPS+LASDL+ + EA KV+ GADYLHLDVMDGHFVPNI+WGAPVIK LRKH P FFD HMMVS PE+WV++I DAGGDQ+TFH+E+T DP ALI+QI + MKVG+A++PGT V+ V P V LVDMVL+MTVEPGFGGQ F A+MMPKV LLR YP DI VDGGLGPST++ A+ AGANMIVAGSSVF++ P VIA LR +VERLGNGK Sbjct: 1 MCHSCQCKIGPSLLASDLASIKDEALKVINAGADYLHLDVMDGHFVPNISWGAPVIKCLRKHTPKAFFDVHMMVSEPEKWVQDIADAGGDQFTFHIEATNDPKALIEQIRKANMKVGVAIKPGTEVEHVFPLVHLVDMVLVMTVEPGFGGQVFMANMMPKVELLRNSYPSLDIEVDGGLGPSTVDIASKAGANMIVAGSSVFRADDPGSVIAQLRTSVERLGNGK 225
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_002895391.1 (ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4] >EEY57064.1 ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]) HSP 1 Score: 330.9 bits (847), Expect = 3.300e-87 Identity = 161/233 (69.10%), Postives = 186/233 (79.83%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMV PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+VDLVDMVL+MTVEPGFGGQ F DMM KV ++R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ VI +R +VE+ GNGK +++LT L Sbjct: 1 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVFKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRAKYPALDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAEDLTAVILQMRHSVEKYGNGKSDDQLTKL 232
BLAST of NO11G02000 vs. NCBI_GenBank
Match: CCA14210.1 (ribulosephosphate 3epimerase putative [Albugo laibachii Nc14]) HSP 1 Score: 324.3 bits (830), Expect = 3.100e-85 Identity = 157/225 (69.78%), Postives = 183/225 (81.33%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGK 226 MCH C C IGPS+LASDL+ + EA KV+ GADYLHLDVMDGHFVPNI+WGAPVIK LR H P FFD HMMVS PE+WV++I DAGGDQ+TFH E+TKDP ALI+QI + MKVG+A++P T V+ V P V LVDMVL+MTVEPGFGGQ F A+MMPK+ LR+ YP DI VDGGLGPSTI+ A+ AGANMIVAGSSVF++ PA VIA LRR+VERLGNG+ Sbjct: 1 MCHDCPCKIGPSLLASDLASIKDEALKVLNSGADYLHLDVMDGHFVPNISWGAPVIKCLRMHTPKAFFDVHMMVSEPEKWVQDIADAGGDQFTFHFEATKDPKALIEQIRKAKMKVGVAIKPETEVEQVFPLVHLVDMVLVMTVEPGFGGQVFMANMMPKIESLRKSYPTLDIEVDGGLGPSTIDIASKAGANMIVAGSSVFRADDPATVIAQLRRSVERLGNGR 225
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_024574981.1 (ribulose-phosphate 3-epimerase [Plasmopara halstedii] >CEG38612.1 ribulose-phosphate 3-epimerase [Plasmopara halstedii]) HSP 1 Score: 322.0 bits (824), Expect = 1.500e-84 Identity = 160/235 (68.09%), Postives = 186/235 (79.15%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELT-PLP 235 M ++CKC IGPS+LA+DLSC+ EA KV++ GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP +LI QI + MKVG+A++PGT + P++DLVDMVLIMTVEPGFGGQ F ADMM KV ++R K+ DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI LR +VE GNGK EEELT P P Sbjct: 1 MANTCKCKIGPSLLAADLSCLKEEALKVLSAGADYLHLDVMDGHFVPNISWGPPVIKCLRSHTK-AFFDCHMMVSKPEQWVSDIAAAGGDQFTFHLETTRDPLSLINQIRQAQMKVGLAIKPGTSAEAAFPYLDLVDMVLIMTVEPGFGGQSFMADMMHKVMIIRAKHKTMDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAADPKAVILRLRHSVETFGNGKGEEELTKPYP 234
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_009538653.1 (hypothetical protein PHYSODRAFT_251615 [Phytophthora sojae] >EGZ05792.1 hypothetical protein PHYSODRAFT_251615 [Phytophthora sojae]) HSP 1 Score: 319.7 bits (818), Expect = 7.600e-84 Identity = 161/238 (67.65%), Postives = 186/238 (78.15%), Query Frame = 0 Query: 1 MCH-----SCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCH SC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDG+FVPNI+WG K LR H FFDCHMMV+ PEQWV +I AGGDQ+TFHLESTKDP ALIKQI +GMKVG+A++PGT + P+V+LVDMVL+MTVEPGFGGQ F ADMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 2 MCHMRSVLSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGNFVPNISWG----KCLRPHTK-AFFDCHMMVAKPEQWVSDIAAAGGDQFTFHLESTKDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPYVELVDMVLVMTVEPGFGGQSFMADMMPKVETIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKATDPKAVILQMRHSVEKYGNGKSDDQLTKL 234
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_004346411.1 (ribulose-5-phosphate-3-epimerase [Capsaspora owczarzaki ATCC 30864] >KJE95268.1 ribulose-5-phosphate-3-epimerase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 306.6 bits (784), Expect = 6.700e-80 Identity = 154/225 (68.44%), Postives = 178/225 (79.11%), Query Frame = 0 Query: 3 HSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLG-PSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKK 227 H C C IGPS+LASD+SC+A+E Q+VV GADY+HLDVMDGHFVPNIT GAPVIK LRKH FFD HMMVS PEQWV+++ DAGGDQ+TFHLEST DP ALI+QI A MKVG+A++P TP + V V VDMVL+MTVEPGFGGQKF A MMPKV LR K+PE DI VDGG+G +TI+A A AGANMIVAGSSV+ + PA VI LR +VER GNGK+ Sbjct: 4 HKCNCRIGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSK-AFFDLHMMVSKPEQWVDDMADAGGDQFTFHLESTADPMALIRQIRAKNMKVGVAIKPNTPAESVEYLVPHVDMVLVMTVEPGFGGQKFMAHMMPKVEHLRTKFPEMDIEVDGGVGVGATIDACAKAGANMIVAGSSVYNAADPAAVIRQLRESVERYGNGKE 227
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_003384884.1 (PREDICTED: ribulose-phosphate 3-epimerase-like [Amphimedon queenslandica]) HSP 1 Score: 305.1 bits (780), Expect = 1.900e-79 Identity = 145/216 (67.13%), Postives = 177/216 (81.94%), Query Frame = 0 Query: 5 CKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVER 221 C C IGPS+L +DLSC+A+E+QK++ GADYLHLDVMDGHFVPN+T+GAP+++ LRKH P FFD HMMV+ PE+WV+++ +AG DQYTFHLE+T DP +LIKQI +GMKVGI ++P TPV+DVLP+VD VDMVLIMTVEPGFGGQKF ++MMPKV LREKYP DI VDGG+G STIE A AGANMIV+GS++ KS P VI LR AV + Sbjct: 6 CHCKIGPSILNADLSCLASESQKMLDNGADYLHLDVMDGHFVPNLTFGAPLVQCLRKHIPHAFFDLHMMVAQPEKWVKDMAEAGADQYTFHLEATSDPESLIKQIREAGMKVGIGIKPNTPVEDVLPFVDKVDMVLIMTVEPGFGGQKFMSNMMPKVKCLREKYPRLDIEVDGGVGLSTIEEVAKAGANMIVSGSAIVKSSDPKSVIDQLRAAVNK 221 The following BLAST results are available for this feature:
BLAST of NO11G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02000 ID=NO11G02000|Name=NO11G02000|organism=Nannochloropsis oceanica|type=gene|length=711bpback to top protein sequence of NO11G02000.1 >NO11G02000.1-protein ID=NO11G02000.1-protein|Name=NO11G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top Synonyms
Publications
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