NO11G02000, NO11G02000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02000 vs. NCBI_GenBank
Match: EWM25004.1 (ribulose-phosphate 3-epimerase [Nannochloropsis gaditana]) HSP 1 Score: 410.6 bits (1054), Expect = 3.300e-111 Identity = 193/234 (82.48%), Postives = 212/234 (90.60%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPLP 235 MCH CKCLIGPSMLASDLSCMA EA+KV+AGGADYLHLDVMDGHFVPNITWG PVIKHLRKHCP +FFDCHMMVSNPEQWV+EIKDAGGDQYTFHLE+ +DPA LI+QI A GM+VG+ALRPGTP++D LPWVD VD+VL+MTVEPGFGGQKF ADMMPKVA LR K PEKDI VDGGLGP+T++AAA AGANMIVAGSSVF S PA+VIA LRR+VE+LGNGK EEELT LP Sbjct: 1 MCHGCKCLIGPSMLASDLSCMADEAKKVIAGGADYLHLDVMDGHFVPNITWGPPVIKHLRKHCPDIFFDCHMMVSNPEQWVQEIKDAGGDQYTFHLEAARDPAGLIEQIKAIGMRVGMALRPGTPIEDALPWVDSVDVVLVMTVEPGFGGQKFMADMMPKVAYLRAKCPEKDIEVDGGLGPATVDAAARAGANMIVAGSSVFNSEVPAKVIAALRRSVEKLGNGKSEEELTQLP 234
BLAST of NO11G02000 vs. NCBI_GenBank
Match: OQS06317.1 (ribulose-phosphate 3-epimerase [Thraustotheca clavata]) HSP 1 Score: 362.1 bits (928), Expect = 1.300e-96 Identity = 179/233 (76.82%), Postives = 198/233 (84.98%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPSMLASDLSC+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LRKH FFDCHMMVS PE+WV++IKDAGGDQ+TFHLEST +P ALI+QI A+GMKVG+A++PGT V+ VLP+V LVDMVL+MTVEPGFGGQ F ADMMPKVA LREK+P DI VDGGLGPSTIEAAA AGANMIVAGSSVFK+ PA+VI +R +VE GNGK EELT L Sbjct: 1 MCHSCACQIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKH-TDAFFDCHMMVSEPEKWVDDIKDAGGDQFTFHLESTSNPEALIEQIRAAGMKVGVAIKPGTAVEGVLPYVSLVDMVLVMTVEPGFGGQSFMADMMPKVAFLREKFPSLDIEVDGGLGPSTIEAAAKAGANMIVAGSSVFKASDPAEVILFMRHSVEIHGNGKTTEELTRL 232
BLAST of NO11G02000 vs. NCBI_GenBank
Match: OQR86718.1 (ribulose-phosphate 3-epimerase [Achlya hypogyna]) HSP 1 Score: 354.4 bits (908), Expect = 2.800e-94 Identity = 172/231 (74.46%), Postives = 194/231 (83.98%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELT 232 MCHSC C IGPSMLASDLSC+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LR+H FFDCHMMVS PE+WV++IKDAGGDQ+TFHLEST +P ALI QI A+GMKVG+A++PGTP + VLP V LVDMVL+MTVEPGFGGQ F ADMMPKV LREK+P DI VDGGLGP+TI+AAA AGANMIVAGSSVF++ PA I +R +VERLGNGK + +LT Sbjct: 1 MCHSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQHTT-AFFDCHMMVSEPEKWVDDIKDAGGDQFTFHLESTSNPEALIAQIRAAGMKVGVAIKPGTPAESVLPLVPLVDMVLVMTVEPGFGGQSFMADMMPKVTFLREKFPALDIEVDGGLGPATIDAAAKAGANMIVAGSSVFRAANPADAILLMRHSVERLGNGKADADLT 230
BLAST of NO11G02000 vs. NCBI_GenBank
Match: GAX93181.1 (ribulose-phosphate 3-epimerase [Pythium insidiosum]) HSP 1 Score: 352.1 bits (902), Expect = 1.400e-93 Identity = 173/231 (74.89%), Postives = 193/231 (83.55%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELT 232 MCHSC C IGPSMLASDLSC+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LR+H FFDCHMMV+ PEQWV +I DAGGDQ+TFHLE+T DP AL +QI +GMKVG+A++PGT V+ VLP+VD VDMVL+MTVEPGFGGQKF ADMMPKVA LR K+P DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ PA VI +R +VERLGNGK + LT Sbjct: 1 MCHSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQHTK-AFFDCHMMVAKPEQWVSDIADAGGDQFTFHLEATSDPLALXQQIRDAGMKVGVAIKPGTSVEAVLPYVDKVDMVLVMTVEPGFGGQKFMADMMPKVATLRAKFPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKASDPAAVILEMRHSVERLGNGKSDAXLT 230
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_009832665.1 (ribulose-phosphate 3-epimerase [Aphanomyces astaci] >ETV77555.1 ribulose-phosphate 3-epimerase [Aphanomyces astaci]) HSP 1 Score: 348.2 bits (892), Expect = 2.000e-92 Identity = 172/225 (76.44%), Postives = 191/225 (84.89%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGK 226 MCHSC C IGPSMLASDLSC+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LR+H FFD HMMVS PE+WV++IKDAGGDQ+TFHLEST +P ALI+QI A+GMKVG+AL+PGT V+ VLP V LVDMVL+MTVEPGFGGQ F ADMMPKV+ LRE++P DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ PA VI LRR+VE GNGK Sbjct: 1 MCHSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQH-TNAFFDVHMMVSEPEKWVDDIKDAGGDQFTFHLESTSNPEALIRQIRAAGMKVGVALKPGTAVESVLPLVSLVDMVLVMTVEPGFGGQSFMADMMPKVSFLRERFPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAALPADVITLLRRSVEVHGNGK 224
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_008871862.1 (ribulose-phosphate 3-epimerase [Aphanomyces invadans] >ETV99306.1 ribulose-phosphate 3-epimerase [Aphanomyces invadans]) HSP 1 Score: 346.7 bits (888), Expect = 5.800e-92 Identity = 171/225 (76.00%), Postives = 190/225 (84.44%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGK 226 MCHSC C IGPSMLASDLSC+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LRKH FFD HMMVS PE+WV++IKDAGGDQ+TFHLEST DP ALI+QI A+GMKVG+AL+PGT V+ VLP V LVDMVL+MTVEPGFGGQ F ADMMPKV+ LRE++P DI VDGGLGPSTI+ AA AGANMIVAGSSVFK+ +PA VI +R +VE GNGK Sbjct: 1 MCHSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTT-AFFDVHMMVSEPEKWVDDIKDAGGDQFTFHLESTSDPEALIRQIRAAGMKVGVALKPGTAVESVLPLVSLVDMVLVMTVEPGFGGQSFMADMMPKVSFLRERFPTLDIEVDGGLGPSTIDVAAKAGANMIVAGSSVFKATSPADVIGLMRCSVEVHGNGK 224
BLAST of NO11G02000 vs. NCBI_GenBank
Match: XP_008610147.1 (ribulose-phosphate 3-epimerase [Saprolegnia diclina VS20] >EQC36726.1 ribulose-phosphate 3-epimerase [Saprolegnia diclina VS20]) HSP 1 Score: 342.8 bits (878), Expect = 8.400e-91 Identity = 167/224 (74.55%), Postives = 190/224 (84.82%), Query Frame = 0 Query: 8 LIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELT 232 +IGPSMLASDL+C+ EA KVVA GADYLHLDVMDGHFVPNITWGAPVIK LRKH FFDCHMMV+ PE+WV++IKDAGGDQ+TFHLEST +P ALI QI A+GMKVG+A++PGT VLP+VDLVDMVL+MTVEPGFGGQ F ADMMPKVA LRE++P DI VDGGLGPSTI+AAA AGANMIVAGSSVF++ PA I +R +VERLGNGK + ELT Sbjct: 1 MIGPSMLASDLACLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTT-AFFDCHMMVAEPEKWVDDIKDAGGDQFTFHLESTSNPTALIAQIRAAGMKVGVAIKPGTAADAVLPYVDLVDMVLVMTVEPGFGGQSFMADMMPKVAFLRERFPLLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFRASDPADAILAMRHSVERLGNGKTDAELT 223
BLAST of NO11G02000 vs. NCBI_GenBank
Match: POM60465.1 (Ribulose-phosphate 3-epimerase [Phytophthora palmivora var. palmivora] >POM71768.1 Ribulose-phosphate 3-epimerase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 340.5 bits (872), Expect = 4.200e-90 Identity = 165/233 (70.82%), Postives = 189/233 (81.12%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ EA KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+V+LVDMVL+MTVEPGFGGQ F ADMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 1 MCHSCACKIGPSLLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPYVELVDMVLVMTVEPGFGGQSFMADMMPKVETIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAAEPKDVILQMRHSVEKYGNGKSDDQLTKL 232
BLAST of NO11G02000 vs. NCBI_GenBank
Match: ETL32060.1 (ribulose-phosphate 3-epimerase [Phytophthora parasitica] >ETL85308.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica] >ETP08311.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 339.3 bits (869), Expect = 9.300e-90 Identity = 165/233 (70.82%), Postives = 189/233 (81.12%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A+RPGT + P+V+LVDMVL+MTVEPGFGGQ F ADMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 32 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIRPGTSAEAAFPFVELVDMVLVMTVEPGFGGQSFMADMMPKVEAIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAADPMAVILQMRHSVEKYGNGKSDDQLTKL 263
BLAST of NO11G02000 vs. NCBI_GenBank
Match: ETI38427.1 (ribulose-phosphate 3-epimerase [Phytophthora parasitica P1569] >ETK78629.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica] >ETM38460.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica] >ETO67200.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica P1976] >ETP36365.1 ribulose-phosphate 3-epimerase [Phytophthora parasitica P10297]) HSP 1 Score: 338.2 bits (866), Expect = 2.100e-89 Identity = 164/233 (70.39%), Postives = 189/233 (81.12%), Query Frame = 0 Query: 1 MCHSCKCLIGPSMLASDLSCMAAEAQKVVAGGADYLHLDVMDGHFVPNITWGAPVIKHLRKHCPGVFFDCHMMVSNPEQWVEEIKDAGGDQYTFHLESTKDPAALIKQILASGMKVGIALRPGTPVKDVLPWVDLVDMVLIMTVEPGFGGQKFKADMMPKVALLREKYPEKDIGVDGGLGPSTIEAAADAGANMIVAGSSVFKSPAPAQVIATLRRAVERLGNGKKEEELTPL 234 MCHSC C IGPS+LASDLSC+ E+ KVVA GADYLHLDVMDGHFVPNI+WG PVIK LR H FFDCHMMVS PEQWV +I AGGDQ+TFHLE+T+DP ALIKQI +GMKVG+A++PGT + P+V+LVDMVL+MTVEPGFGGQ F ADMMPKV +R KYP DI VDGGLGPSTI+AAA AGANMIVAGSSVFK+ P VI +R +VE+ GNGK +++LT L Sbjct: 32 MCHSCTCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTK-AFFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSAEAAFPFVELVDMVLVMTVEPGFGGQSFMADMMPKVEAIRAKYPTLDIEVDGGLGPSTIDAAAKAGANMIVAGSSVFKAADPMAVILQMRHSVEKYGNGKSDDQLTKL 263 The following BLAST results are available for this feature:
BLAST of NO11G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02000 ID=NO11G02000|Name=NO11G02000|organism=Nannochloropsis oceanica|type=gene|length=711bpback to top protein sequence of NO11G02000.1 >NO11G02000.1-protein ID=NO11G02000.1-protein|Name=NO11G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top Synonyms
Publications
|