NO11G01950, NO11G01950 (gene) Nannochloropsis oceanica

Overview
NameNO11G01950
Unique NameNO11G01950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length668
Alignment locationchr11:632954..633621 +

Link to JBrowse

Properties
Property NameValue
DescriptionAarF domain-containing protein kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:632954..633621 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: ODU45597.1 (2-polyprenylphenol 6-hydroxylase [Xanthomonadaceae bacterium SCN 69-123] >OJY76386.1 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas sp. 69-14])

HSP 1 Score: 64.7 bits (156), Expect = 3.100e-7
Identity = 49/155 (31.61%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L D   H D H GN I  M DGR+ +ID G++  L           L GL   D + + D +LE+  G VEVDE                                    ++ + L  D+A  I T    EG+  QLDPDFDM   A PF  R
Sbjct:  282 MVLDDGCFHADPHPGN-IFYMPDGRIGIIDFGMVGRLSEQRRFQVARLLHGLVTQDPEAVTDVLLEW-AGGVEVDESRLQQDLGSFVDQYRGVPLKDLRIGLMLGEVTALLRQYGLTLPADLALMIKTFLTLEGMGRQLDPDFDMAGAARPFLER 434
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_100322864.1 (ubiquinone biosynthesis protein UbiB [Xanthomonadaceae bacterium NML91-0213] >PJJ99146.1 ubiquinone biosynthesis protein UbiB [Xanthomonadaceae bacterium NML91-0213])

HSP 1 Score: 64.3 bits (155), Expect = 4.000e-7
Identity = 49/170 (28.82%), Postives = 67/170 (39.41%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR--YKGWSTAEAVMRG 133
            M L D   H D H GN I  +E+G + +ID G++  +           L GL + DV+ + D +L++  G   VDE                                    +  + L  D+A  I      EGL  QLDPDFDM  +A PF  R   +GWS      RG
Sbjct:  282 MVLEDGLFHADPHPGN-IFYLENGGIGLIDFGMVGHVSERRRMQVAQLLYGLVDQDVEAVTDILLDWTEGTSGVDEGRLQVEVGTLIDQYRGLPLKELRIASMLADVAGLLRRHALTLPPDLALMIKAFLTLEGLGRQLDPDFDMASEARPFLRRAMLEGWSPRVLARRG 450
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BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_065723161.1 (2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia] >OCK48102.1 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia])

HSP 1 Score: 63.9 bits (154), Expect = 5.300e-7
Identity = 48/155 (30.97%), Postives = 61/155 (39.35%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L D   H D H GN I+ M DGR+ VID G++ +L           L GL   D   + D +L++  G VEVDE                                     + + L  D+A  I      EG+  QLDPDFDM   A PF  R
Sbjct:  283 MVLEDGSFHADPHPGN-IIYMRDGRIGVIDFGMVGALSEVRRFQVAQLLHGLVEQDPQGVADVLLDW-AGGVEVDENRLQHDISQFVDQYRGVPLKDLRIGLMLGDITQLLRSYSLTLPADLALMIKAFLTLEGMGRQLDPDFDMASAARPFLER 435
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_104939108.1 (2-polyprenylphenol 6-hydroxylase [Stenotrophomonas acidaminiphila] >AUZ55380.1 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas acidaminiphila])

HSP 1 Score: 63.9 bits (154), Expect = 5.300e-7
Identity = 48/155 (30.97%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L D   H D H GN I  + DGR+ +ID G++  L           L GL   D + + D +LE+  G VEVDE                                    ++ + L  D+A  I T    EG+  QLDPDFDM   A PF  R
Sbjct:  282 MVLDDGCFHADPHPGN-IFYLRDGRIGIIDFGMVGRLSEQRRFQVARLLHGLVTQDPEAVTDVLLEW-AGGVEVDESRLQQDLGSFVDQYRGVPLKDLRIGLMLGDVTALLRQYGLTLPADLALMIKTFLTLEGMGRQLDPDFDMAGAARPFLER 434
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_017155111.1 (2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli] >KGT49525.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHD66713.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHD67736.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHD70300.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHS23478.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHS28462.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHS39313.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KHS39842.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KIJ00434.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. phaseoli] >KUF26529.1 ubiquinone biosynthesis protein UbiB [Xanthomonas phaseoli pv. manihotis] >ATS21015.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. phaseoli] >ATS27687.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. phaseoli] >ATS31507.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. phaseoli] >ATS35924.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. phaseoli] >SOO32257.1 Ubiquinone biosynthesis protein [Xanthomonas phaseoli pv. phaseoli] >SON81280.1 Protein kinase [Xanthomonas phaseoli pv. phaseoli] >SON85986.1 Protein kinase [Xanthomonas phaseoli pv. phaseoli] >SON79079.1 Protein kinase [Xanthomonas phaseoli pv. phaseoli])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 44/155 (28.39%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L+D   H D H GN I  + DGR+ VID G++  +           L G+ + D D ++D +LE+    +EVDE                                       + L  D+A  I      EG+  QLDPDFDM  +A P+  R
Sbjct:  282 MVLQDGCFHADPHPGN-IFYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDADAVIDVLLEWAGTSLEVDEARLQQDIGAFVDEYRGVPLKELRIGAMLGDVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDMATEARPYLER 435
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_017166417.1 (2-polyprenylphenol 6-hydroxylase, partial [Xanthomonas phaseoli])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 44/155 (28.39%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L+D   H D H GN I  + DGR+ VID G++  +           L G+ + D D ++D +LE+    +EVDE                                       + L  D+A  I      EG+  QLDPDFDM  +A P+  R
Sbjct:  282 MVLQDGCFHADPHPGN-IFYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDADAVIDVLLEWAGTSLEVDEARLQQDIGAFVDEYRGVPLKELRIGAMLGDVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDMATEARPYLER 435
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_057678232.1 (2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli] >OQP75774.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. dieffenbachiae])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 44/155 (28.39%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L+D   H D H GN I  + DGR+ VID G++  +           L G+ + D D ++D +LE+    +EVDE                                       + L  D+A  I      EG+  QLDPDFDM  +A P+  R
Sbjct:  282 MVLQDGCFHADPHPGN-IFYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDADAVIDVLLEWAGTSLEVDEARLQQDIGAFVDEYRGVPLKELRIGAMLGDVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDMATEARPYLER 435
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: OQP80312.1 (2-polyprenylphenol 6-hydroxylase [Xanthomonas phaseoli pv. syngonii LMG 9055])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 44/155 (28.39%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L+D   H D H GN I  + DGR+ VID G++  +           L G+ + D D ++D +LE+    +EVDE                                       + L  D+A  I      EG+  QLDPDFDM  +A P+  R
Sbjct:  282 MVLQDGCFHADPHPGN-IFYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDADAVIDVLLEWAGTSLEVDEARLQQDIGAFVDEYRGVPLKELRIGAMLGDVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDMATEARPYLER 435
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_062168025.1 (MULTISPECIES: 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas] >AMJ56986.1 ubiquinone biosynthesis protein UbiB [Stenotrophomonas sp. KCTC 12332])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 47/155 (30.32%), Postives = 60/155 (38.71%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L D Y H D H GN I  M DGR+ VID G++ +L           L GL   +   + D +L++  G VEVDE                                     + + L  D+A  I      EG+  QLDP FDM   A PF  R
Sbjct:  282 MVLEDGYFHADPHPGN-IFYMRDGRIGVIDFGMVGALSEARRFQVAQLLHGLVEQEPQAVADVLLDW-AGGVEVDEARLQQDISQFVDQYRGVPLKDLRIGLMLGDITQLLRSYSLTLPADLALMIKAFLTLEGMGRQLDPQFDMASAARPFLER 434
[Close]
BLAST of NO11G01950 vs. NCBI_GenBank
Match: WP_104621168.1 (2-polyprenylphenol 6-hydroxylase [Xanthomonas axonopodis] >PPT35668.1 2-polyprenylphenol 6-hydroxylase [Xanthomonas axonopodis pv. begoniae])

HSP 1 Score: 63.5 bits (153), Expect = 6.900e-7
Identity = 44/155 (28.39%), Postives = 62/155 (40.00%), Query Frame = 0 
Query:    1 MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLRGLCNSDVDVIVDKILEFNVGKVEVDE------------------------------------KFKIVLRGDVAASIMTISVSEGLILQLDPDFDMVRQALPFFVR 120
            M L+D   H D H GN I  + DGR+ VID G++  +           L G+ + D D ++D +LE+    +EVDE                                       + L  D+A  I      EG+  QLDPDFDM  +A P+  R
Sbjct:  282 MVLQDGCFHADPHPGN-IFYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDADAVIDVLLEWAGTSLEVDEARLQQDIGAFVDEYRGVPLKELRIGAMLGDVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDMASEARPYLER 435
The following BLAST results are available for this feature:
BLAST of NO11G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ODU45597.13.100e-731.612-polyprenylphenol 6-hydroxylase [Xanthomonadaceae... [more]
WP_100322864.14.000e-728.82ubiquinone biosynthesis protein UbiB [Xanthomonada... [more]
WP_065723161.15.300e-730.972-polyprenylphenol 6-hydroxylase [Stenotrophomonas... [more]
WP_104939108.15.300e-730.972-polyprenylphenol 6-hydroxylase [Stenotrophomonas... [more]
WP_017155111.16.900e-728.392-polyprenylphenol 6-hydroxylase [Xanthomonas phas... [more]
WP_017166417.16.900e-728.392-polyprenylphenol 6-hydroxylase, partial [Xanthom... [more]
WP_057678232.16.900e-728.392-polyprenylphenol 6-hydroxylase [Xanthomonas phas... [more]
OQP80312.16.900e-728.392-polyprenylphenol 6-hydroxylase [Xanthomonas phas... [more]
WP_062168025.16.900e-730.32MULTISPECIES: 2-polyprenylphenol 6-hydroxylase [St... [more]
WP_104621168.16.900e-728.392-polyprenylphenol 6-hydroxylase [Xanthomonas axon... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01950.1NO11G01950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01950.1NO11G01950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01950 ID=NO11G01950|Name=NO11G01950|organism=Nannochloropsis oceanica|type=gene|length=668bp
ATGTTTTTAAGGGATAACTACGTGCATGGGGACATGCATGCGGGGAATTT
GATTGTGTCGATGGAGGACGGCCGGGTCACAGTCATCGACGCGGGGTTGA
TTACGTCCTTGAAGTCAGATGTTGCTAATCCGTTCGGGGACTTCCTGAGG
GGGTTGTGTAACTCAGATGTGGATGTGATTGTGGATAAGATATTGGAATT
TAACGTGGGGAAAGTGGAGGTGGATGAGgtggggtttaggaagaaaattg
aggagataacggatcattttaagactaaggaagctgcggttgggggaaac
ggggggggggggggaaggggattgatgtgaatgggaagaaggacgagggg
aagttcgcattgggtgatgtggtgggggaaattctcttaaatttgcagAA
GTTCAAGATCGTGTTGAGAGGGGATGTGGCCGCTTCGATTATGACGATTT
CTGTGTCGGAAGGTTTGATATTGCAGTTGGATCCGGATTTCGATATGGTC
CGGCAGGCGTTGCCTTTCTTTGTAAGGTACAAAGGATGGAGCACGGCGGA
GGCCGTCATGCGGGGAGGAGGGTCGAAGTCCAAGTCCAAGACTTCTCTTT
CTTCCTCTTCTCCTCCTCCGTCAGAGACAGTAGAGGCTGCTGCGACGCTC
TCGGCGGCGCCTGCGTAG
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protein sequence of NO11G01950.1

>NO11G01950.1-protein ID=NO11G01950.1-protein|Name=NO11G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=166bp
MFLRDNYVHGDMHAGNLIVSMEDGRVTVIDAGLITSLKSDVANPFGDFLR
GLCNSDVDVIVDKILEFNVGKVEVDEKFKIVLRGDVAASIMTISVSEGLI
LQLDPDFDMVRQALPFFVRYKGWSTAEAVMRGGGSKSKSKTSLSSSSPPP
SETVEAAATLSAAPA*
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Synonyms
Publications