NO11G01880, NO11G01880 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G01880 vs. NCBI_GenBank
Match: EWM25033.1 (hypothetical protein Naga_100049g4 [Nannochloropsis gaditana]) HSP 1 Score: 674.9 bits (1740), Expect = 7.100e-190 Identity = 561/1777 (31.57%), Postives = 790/1777 (44.46%), Query Frame = 0
Query: 63 MQPPLEQLLIPSIHDGDCHETVVCDEEAQTRFCLECALECLKEKDLLVVRKRRLLRGIDAA---LERLSVACNIYDSNS--GSFMESGSGCEDEGLIMMVTQRRAGPRPVVVAANHILFSFLQYVILQPMDGKDRAEMVPALLKTSIRLFTLVTWDDQVLASVYGPLLDACRAQGTRESLHLIQLLSAMLNAANDDGSIPHLDRLLEGGHEEVGEREAEVEEGLFDATLPSFTSSLAAFVKMLAGECFINGLGSLPSNQRQRHHSLIEEGDEEKHVELLHLILLIIQAPRAKTFLLQTTSVLPRYLNQIQSLAHLAQGPSAAAALGRGVTGAWAKNLLALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--GEVRKGEVVL--LRPYHTTIATTLAKGLLVSTDMDLAIGAASYLLRLLRWLPVGVXXXXXXXXXXXXXXXXXXXXXGERAVMAEAMLQNGTVDYCLEGLRNALTXXXXXXXXXXXXXXXXXXXXXXXXXXXCVRLTHRLCRLLWVLSRAEPLGFFAPQRFRPLLMNELVALLQRL----EIASTAGGGGE-GDQEEANIYQAEE--DWIEEDNEGFGKSAPILVLDILQASLAQTRVIYDEEIMESLLEMLPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRFVLHLLLFMSEYLGAISNKLLFPSPSSLDNYLLGLRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFQLSRAALHLLALFDVTSPRTAGEEYAVCRFFLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRQSLLEAGVLEVALLHLGELVNMSAGQEGXXXXXXEEAHVFSLLVMVLMQEETGVGKGKKGARLLLDFVQQDLKPSNGASFPQKVSELWAWLLMQDMRRFCRWSRAYVEVERGREEGKEGGAKDEFWSRFELLLALSLCFRRRGGPIGRASTMGVHNLLVMWGTCVQQGEQQEQQQAYLGRALSPLSIRLLIDLTLQSNDTNXXXXXXXXXXXXXXXXXXPAPLLLALPIALRPGLQEALHALTSTDPTAADTYCSLFLPPSLPSALLPFLYLGHSPGAQCIIHRWLTCRAEE-------GGKEGWKKEDPVWATALLLYFEHAGGEGSAVLLALLEYVRAVPPVSLPRRLVHALAAFKVASAWPGLWSSCINVSGDVLGFLHDIVLPALVQDEK-------------GREE-------RGLPVEIIMVTTAALRHANWNTHPGGFAPIVKLASRLLLLVSSALPISFHLQEQKEQXXXQLENPAVVAALLSLTNQLVVYGQGSFFLNQHETILELAWSFHNSNSSGNWRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVSHPFFSLPFLQMCLEPCVEEAEGQQIKKAALGLLCRLYSSGHVLREGARGEEREGDVAKGEDGHTEVEGEEFIREVGRGDRGGDMWGTTDDRRRLRLQVQTCVLHRDPSLRECALALLLQLWDSSTPTAWDIFLLQSPSLNSSLAS--SLYAPLYVAACIVHPSKEGAAATXXXXXXXXXXXXXXEPAVRFLFDHLLHTLRDTTRNLVAGERGSLPAWFPSVLFLLHALARTGRLERRQRQELRXXXXXXXXXXXXXXXXXXXXGRERYALVFGDARLVDYEEEAGLEEEWQKGEGGERKKVWFPPGYLSMYLY-DGGNGQIAKHLNMRQEKGKEERVELPTHPREVDLKRVLEDLQ 1794
M LEQ+L P IHD DCHE VV DEE QT+FC ECA++C K +LL ++KRRLL G+ A L+R+ A G+ ++ S + + I + P V + I+ S+ ++V+L+ M+ D +++P LLKT+++LF T D+Q + ++Y LL CRA G RESLH+IQLLS ML A+++G I H D LLE GE G SF +SL AFV ++AG+CF + G+ S + + E G E+ V+LL L+LL+++ PR K LL+ V+ R++N+IQSL++L QG AA L R V GAW K +LAL++ E G V K + L P+HTT+A+TLAK L++S D+++A GA SYLL LL L G +AE +++ G V++CLEG+RN L ++T LCRL+W LSRA+PLGF+ QRF P L ELV LLQ L +A + E D E Y+ E DW+ D SAP LVL I+ ASL QTRVIYDE++M LL++L S F L LLLF+SEYLGAISNKLLFPS L+++L L+ Q+ L AA+ LL LF T R+ G+EYA+C + L L Q LL+ GV E+A+ H+ L E + VFS + L+ + + +G L FV+Q+L+ + A+ +V+E+W WLL QD+ CRW Y+ SRFELLL +S R+ P + LL+ WG + QQ +++AYLGR L+PLSI+L++DL L + + L +R GLQ L A + DT+CS++L PS L L L + G Q I+HRW+ E+ G G ++A L YF G+G +VLLALL+Y++A RL AL AS W LW+SC + + L LHD++LP LV +EE + L V++I + AAL+HA W+ F P++K SR+LLL ++ L+NP V AALL+L N + G FLNQ IL+LAWSF +++ R W+SH FF + FL+ C++P ++ Q+ ++ AL LLC + + RE +GE EV + R+ G+T R++RL VQ C+L D +RECA+ALLLQLWD ++PTAWDIFLLQSP + SSLAS S YAPL+VAAC++ G + FL DHL+ ++ + AGER SLPA++PS+L+ AL TG ++ Q+ L+ ++ L DARLVDY+E A E++ + + Y D + + + PTHPREVDLK+V+E LQ
Sbjct: 1 MYSSLEQVLNPQIHDDDCHEVVVSDEETQTQFCFECAMDCFKSPNLLTIQKRRLLIGMSAGFTQLDRIDEAQGTETDRDEHGNSVDELSNSQKQATIEL---------PCKVVGDRIIRSYFEHVVLRCMNPIDDVDVIPILLKTTMQLFAHATLDEQTVMALYEQLLHTCRANGIRESLHIIQLLSTMLENADNNGPILHFDHLLENIE---GEDIWHHNNGTNGHPSLSFATSLVAFVDLVAGDCFRDLCGA--SKDGKERFACNESGGRERQVQLLRLLLLLVRGPRTKALLLR-EGVMSRHMNRIQSLSNLGQGSLGAATLIRSVEGAWIKAILALSVVLIPSPDPGPFTDITLDTTKLKTRKRWLSQRNLEPLGRVAKSKETTAGLLPWHTTLASTLAKDLIISADLEVAFGAGSYLLLLLSCLLHGPDKRGNE--------------------LAEELIRIGLVEFCLEGIRNVLRFAVSNGHQTQQQRNQEQGD----------KITLLLCRLMWTLSRAQPLGFYGSQRFSPSLFKELVELLQGLAENESLARVSRLSLEMEDPHELVSYEETESKDWLVMD-----ASAPNLVLSIIHASLTQTRVIYDEDLMGRLLQVL------RHCQNKDNEEHPLNSQQDPTSSFSSTFPLQLLLFLSEYLGAISNKLLFPSHPILESFLHCLKTQIIFFLCFPICLPSYSKAGPTFMLTLALANLRVLDILSVRHYHHHQPRLPPSQPNLLSL-----------LLDAAMQLLVLFSGTERRSPGDEYAICHLYSKL-----------LLLMSDAEEKCCTTECMGNDIDRDSHRLSQLLLDTGVFEMAIQHISYL-------EEGENVEEKNVDVFSQIAARLLTDVSDKSEGLDPCH-LTRFVRQNLRTLHFATLSDEVAEIWLWLLAQDLHCLCRWEAEYLV---------------NGCSRFELLLLISRRVWRKRRPHVIVPGEEISKLLISWG----KQAQQAREEAYLGRILTPLSIKLILDLALGGSS------------------------VPRLAPEVRAGLQTVLQAFCVRENKGVDTFCSIYLSCHGPSHLHSCLALADATGVQFIVHRWMDQLVEDKLNVEISEGSNG----PSLFARVLHTYFNTGAGDGRSVLLALLQYMKAASSHRPTPRLAQALTYLYTASCWSQLWASCADTCSETLQILHDMILPVLVDGSSILEGQTALRLTNVTKEENQIMPDVQTLAVQVIQIVKAALQHAAWS---ADFTPVLKTTSRILLLATA----------------PPLKNPHVGAALLALINDITRRGHDE-FLNQCAGILDLAWSFESASP----RLATTNALLYCLLLLHHRCTRTQAQLQGLRGEHQTNVQVRADADSFKPSWLSHAFFRIDFLETCIQPDNDDEPTQERRRVALALLCLM-----MTRENRTFPTLSPSKLQGE--KWEVSKDSAFRK-----------GST-KFRKMRLNVQACLLDSDARVRECAMALLLQLWDYASPTAWDIFLLQSPPVISSLASGTSSYAPLFVAACLL----SGETSIHNVICNPLGNE-------TFLVDHLVARVQAVIHGVRAGERDSLPAYYPSLLYFFQALTLTGHIKHEQQLTLQ---RILKPSSLKNDGRSGNKSDTQWMLAVDDARLVDYDESACQEQD-----------------LVDVVKYMDYSDPHDRLRITTTEGLRCGSTCAYPTHPREVDLKKVVETLQ 1570 The following BLAST results are available for this feature:
BLAST of NO11G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01880 ID=NO11G01880|Name=NO11G01880|organism=Nannochloropsis oceanica|type=gene|length=5744bpback to top protein sequence of NO11G01880.1 >NO11G01880.1-protein ID=NO11G01880.1-protein|Name=NO11G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1797bpback to top Synonyms
Publications
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