NO11G01780, NO11G01780 (gene) Nannochloropsis oceanica

Overview
NameNO11G01780
Unique NameNO11G01780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1728
Alignment locationchr11:583273..585000 +

Link to JBrowse

Properties
Property NameValue
DescriptionFructose--bisphosphate
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:583273..585000 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004332fructose-bisphosphate aldolase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000741FBA_I
Homology
BLAST of NO11G01780 vs. NCBI_GenBank
Match: PRW44409.1 (fructose-1,6-bisphosphate aldolase [Chlorella sorokiniana])

HSP 1 Score: 304.3 bits (778), Expect = 7.200e-79
Identity = 188/403 (46.65%), Postives = 235/403 (58.31%), Query Frame = 0
Query:   57 LETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWM-GKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDK-SLHETNRGF 458
            LE  A  +A PG+GLLA+DES  T+GKRL  AG  N EETRRAYR++ +  P     +SGAI+F ETL Q A    +G LF   L+ +GVLPG+KVD GL PL   P ET T G++ L   C  + + GARFAKWRA +++      P+   ++ N+A+LA YAA+CQA GLVPIVEPE+LI+G H+   FA  +   +S     + Q  V LE                                    +TLLKPQM +PG D T  E+PT +  A  TL V+RR VP AVPGIMFLSGGQTEE+AT NL  IN+LA++   +        PW LSFSFGRSLQASVL  W   +E N  A   +A  LA+AN QA LG Y GPHPS+     SL E  RG+
Sbjct:    4 LEETARHLAAPGKGLLASDESTGTIGKRLEKAGFDNSEETRRAYRQLFYTAPIGEAGISGAIMFKETLYQSA---DDGTLFVECLKRQGVLPGIKVDEGLVPLEGCPGETSTRGLEGLAAACAEYASAGARFAKWRAALKVG--GGCPSEKAIEENAAQLAEYAAICQAQGLVPIVEPELLIDGDHSLAQFADASTRVISRCVAHLWQKNVVLE------------------------------------ATLLKPQMCIPGADYT-GEKPTSDVIADETLRVMRRCVPAAVPGIMFLSGGQTEEEATVNLNAINRLAQQQGRA--------PWSLSFSFGRSLQASVLKLWSEDREGNQQACRNMAAALARANGQAVLGRYEGPHPSITSQAGSLREDFRGW 356          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_002784645.1 (fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983] >EER16441.1 fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 303.5 bits (776), Expect = 1.200e-78
Identity = 185/409 (45.23%), Postives = 243/409 (59.41%), Query Frame = 0
Query:   46 ATQLTQEQKDALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSLHETN 455
            A ++ + Q + ++T AN +  PG+G+LAADES  T+ KR  AAG+ N EE R AYR +LF  P+ G+Y+SG+ILF ETL Q   K+ EG     LL+ +G++PG+KVD GL  L  +  ET T G+D L +RCQ +Y QGARFAKWRAV++IDE  Q+P++  +   +  LARYA +CQA GLVPIVEPEIL +G+HT ET A VTE  LS V+  +    V LEG                                     LLKP MV  G D     RPT ++ A  T+  L R VPPA+ G++FLSGGQ+EE A+ NL+ +NQL    P+  R      PW L+FS+GR+LQAS +  W GKEEN  AA       AKAN++AQLG+Y G      K+ SL+  N
Sbjct:    3 AREVLKYQSELIQT-ANAICTPGKGILAADESTGTIKKRFDAAGIENTEEHRAAYRSLLFTAPDAGKYISGSILFEETLFQ---KNAEGIPMVDLLKKQGIIPGIKVDKGLVQLAGTDGETATQGLDGLAERCQKYYEQGARFAKWRAVLKIDEAKQMPSQLSIVETAHTLARYATICQANGLVPIVEPEILTDGAHTIETSAYVTERVLSAVFKALNDQHVLLEG------------------------------------CLLKPNMVTAGADC--PVRPTAQKIAELTVRTLARTVPPALVGVVFLSGGQSEEDASINLSAMNQL----PTERR------PWALTFSYGRALQASAIKTWSGKEENTKAAQEAFLVRAKANSEAQLGKYQGSGDESAKE-SLYVKN 358          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_005847258.1 (hypothetical protein CHLNCDRAFT_48836 [Chlorella variabilis] >EFN55156.1 hypothetical protein CHLNCDRAFT_48836 [Chlorella variabilis])

HSP 1 Score: 302.8 bits (774), Expect = 2.100e-78
Identity = 189/417 (45.32%), Postives = 239/417 (57.31%), Query Frame = 0
Query:   56 ALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPG-------------VDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWM-GKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDK-SLHETNRGF 458
            ALE IA+Q+A PG+GLLA+DES  T+GKRL  AG  N EETRR+YRE+ +  P     +SGAILF ETL Q A    +G  F   L  +GVLPG+KVD GL PL   P ET T G++ L   C+ + A GARFAKWRA +++   A  P+   +++N+ +LA YAAVCQACG+VPIVEPE+LI+G H    FA  +  A+S              G V E                               +TLLKPQM++PG                    RP+P++ A  TL V+RR VPPA+PGIMFLSGGQTEE+AT NL  INQLA++   +        PW LSFSFGRSLQASVL  W      N      +A  LA+AN+QA LG + GPHPS+   + SL E+ RG+
Sbjct:    4 ALEEIASQLAAPGKGLLASDESTGTIGKRLEKAGFENSEETRRSYRELFYTAPIGDAGISGAILFKETLRQSA---GDGTPFTQCLLRQGVLPGIKVDEGLVPLEGRPGETSTRGLEGLEAACRQYAADGARFAKWRAALKVG--AGRPSERAIELNAQQLAEYAAVCQACGMVPIVEPELLIDGDHDTAAFAHASARAISRC------------GVVLE-------------------------------ATLLKPQMILPGRLRAIHPAMHALAGADYSGPRPSPDDVAHETLRVMRRCVPPALPGIMFLSGGQTEEEATVNLNRINQLAQQQGRA--------PWALSFSFGRSLQASVLKLWSEDPSGNRQRCRDMAAALAQANSQAVLGRFEGPHPSVTSQQGSLRESFRGW 364          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_024384860.1 (fructose-bisphosphate aldolase 6, cytosolic-like [Physcomitrella patens] >XP_024384861.1 fructose-bisphosphate aldolase 6, cytosolic-like [Physcomitrella patens] >PNR48410.1 hypothetical protein PHYPA_012886 [Physcomitrella patens])

HSP 1 Score: 300.4 bits (768), Expect = 1.000e-77
Identity = 184/400 (46.00%), Postives = 233/400 (58.25%), Query Frame = 0
Query:   55 DALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSLHETN 455
            + L+  A  +A PG+G+LAADES  T+GKRL +  + N E  R+A RE+LF  P +GE+LSG ILF ETL QK     +G+ F  +++  G++PG+KVD G   L  +  ET T G DDL KRC  +Y  GARFAKWRAV++I E    PT   +Q N+  LARYA +CQ  GLVPIVEPEIL++GSH+ +  A VTE  L+  Y  +    V LEG                                    TLLKP MV PG D+   E+  PE  A+ T+  L+R VPPAVPGI+FLSGGQ+EE+ATQNL  +N L            TT PW LSFSFGR+LQA+VL  W GK+EN  AA       AKAN++A LG Y G + S    +SLH  N
Sbjct:   10 EELQATAKYIATPGKGILAADESTGTIGKRLSSIKVENVEANRQALRELLFTTPGVGEFLSGVILFEETLYQKT---ADGKPFVDVMKENGIIPGIKVDKGTINLWGTNGETTTQGFDDLHKRCAAYYDAGARFAKWRAVLKIGELE--PTELAIQQNAQGLARYAIICQENGLVPIVEPEILVDGSHSIDKCAEVTEKVLAACYKALNDQHVLLEG------------------------------------TLLKPNMVTPGSDA---EKVAPEVVAKYTVRTLQRTVPPAVPGIVFLSGGQSEEEATQNLNAMNALK-----------TTKPWALSFSFGRALQATVLKTWGGKKENVKAAQDALHVRAKANSEATLGTY-GGNASGEGTESLHVKN 353          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_005709261.1 (fructose-bisphosphate aldolase, class I [Galdieria sulphuraria] >EME32741.1 fructose-bisphosphate aldolase, class I [Galdieria sulphuraria])

HSP 1 Score: 300.4 bits (768), Expect = 1.000e-77
Identity = 172/388 (44.33%), Postives = 225/388 (57.99%), Query Frame = 0
Query:   52 EQKDALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVG 440
            + KD L   A  +  PG+G+LA DES  T+GKR  +  + N+EE RR+YRE+LF  P  G Y+SG I F ETL  K     +G+ F  +++  GV+PG+KVD G+ P+  +  ET T G+D L+ RCQ +Y  GARFAKWRAVI+I      P+   ++ N+  LARYAA+CQ  GLVPIVEPE+L++G HT E   RVTE  L EVYY + Q  V LEG                                    TLLKP MV+PG D   +++  P++ A  T+  L+R VP AVPGI+FLSGGQ+EE+A+ NL  +NQ+               PW LSFS+GR+LQ+S L AW GK EN  AA       AKAN +A LG+Y G
Sbjct:    6 QYKDELIATAKALVTPGKGILAGDESTGTIGKRFASIQVENNEENRRSYRELLFTAPNFGHYISGVITFEETLYHKT---SQGKPFVDVMKEAGVIPGIKVDKGVTPIPGTKDETSTQGLDSLLSRCQKYYETGARFAKWRAVIKISIADGCPSDVAIKENAWGLARYAAICQQAGLVPIVEPEVLMDGDHTIEDSQRVTEKVLYEVYYALHQQHVLLEG------------------------------------TLLKPNMVLPGTDC--KDKAFPKKIAECTVRTLQRTVPAAVPGIVFLSGGQSEEEASVNLNAMNQVE-----------MVKPWKLSFSYGRALQSSCLKAWQGKAENVRAAQEAFLARAKANGEATLGKYAG 341          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_002785910.1 (fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983] >EER17706.1 fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 299.3 bits (765), Expect = 2.300e-77
Identity = 180/394 (45.69%), Postives = 227/394 (57.61%), Query Frame = 0
Query:   61 ANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSLHETN 455
            AN +   G+G+LAADES  T+ KR   AG+VN EE R AYR +LF  P +GEY+SGAIL+ ETL Q   K+ EG     LL+ + ++PG+KVD GL  L  +  ET T G+D L +RCQ +YAQGARFAKWR V+RIDE    PT+  ++  +  LARYA+VCQ  GLVPIVEPEIL +G HT ET A VTE  LS V+  +    + LEG                                     LLKP MV  G +     RPT EE AR T+  L R VPPA+ G+ FLSGGQ+EE A+ NL  +N L K             PW L+FS+GR+LQAS +  W GK EN  AA A+    AKAN++AQLG+Y G       D + +E+N
Sbjct:   17 ANAICTDGKGILAADESTGTIKKRFDGAGIVNTEENRAAYRSLLFTTPGLGEYISGAILYEETLFQ---KNAEGVEMVELLKKQNIIPGIKVDKGLTVLAGTDGETTTMGLDGLAERCQKYYAQGARFAKWRTVLRIDEAKHQPTQLSIEETAHNLARYASVCQENGLVPIVEPEILQDGVHTIETDAYVTERVLSAVFKALNDHHILLEG------------------------------------CLLKPNMVTAGAEC--PVRPTSEEIARLTVRTLARTVPPALVGVTFLSGGQSEEMASVNLNAMNVLPKERR----------PWALTFSYGRALQASTIKTWAGKAENTKAAQAVLLSRAKANSEAQLGKYQGS-----SDATANESN 354          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_002768822.1 (fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983] >EER01540.1 fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 298.9 bits (764), Expect = 3.000e-77
Identity = 180/394 (45.69%), Postives = 227/394 (57.61%), Query Frame = 0
Query:   61 ANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSLHETN 455
            AN +   G+G+LAADES  T+ KR   AG+VN EE R AYR +LF  P +GEY+SGAIL+ ETL Q   K+ EG     LL+ + ++PG+KVD GL  L  +  ET T G+D L +RCQ +YAQGARFAKWR V+RIDE    PT+  ++  +  LARYA+VCQ  GLVPIVEPEIL +G HT ET A VTE  LS V+  +    + LEG                                     LLKP MV  G +     RPT EE AR T+  L R VPPA+ G+ FLSGGQ+EE A+ NL  +N L K             PW L+FS+GR+LQAS +  W GK EN  AA A+    AKAN++AQLG+Y G       D + +E+N
Sbjct:   17 ANAICTDGKGILAADESTGTIKKRFDGAGIVNTEENRAAYRSLLFTTPGLGEYISGAILYEETLFQ---KNAEGVEMVELLKKQNIIPGIKVDKGLTVLAGTDGETTTMGLDGLAERCQKYYAQGARFAKWRTVLRIDEAKHQPTQLSIEETAHNLARYASVCQENGLVPIVEPEILQDGVHTIETDAYVTERVLSAVFKALNDHHILLEG------------------------------------CLLKPNMVTAGAEC--PVRPTSEEIARLTVRTLARTVPPALVGVTFLSGGQSEEMASVNLNAMNVLPKERR----------PWALTFSYGRALQASTIKTWAGKAENTEAAQAVLLARAKANSEAQLGKYQGS-----SDATANESN 354          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_002779280.1 (fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983] >EER11075.1 fructose-1,6-bisphosphate aldolase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 298.9 bits (764), Expect = 3.000e-77
Identity = 180/394 (45.69%), Postives = 227/394 (57.61%), Query Frame = 0
Query:   61 ANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSLHETN 455
            AN +   G+G+LAADES  T+ KR   AG+VN EE R AYR +LF  P +GEY+SGAIL+ ETL Q   K+ EG     LL+ + ++PG+KVD GL  L  +  ET T G+D L +RCQ +YAQGARFAKWR V+RIDE    PT+  ++  +  LARYA+VCQ  GLVPIVEPEIL +G HT ET A VTE  LS V+  +    + LEG                                     LLKP MV  G +     RPT EE AR T+  L R VPPA+ G+ FLSGGQ+EE A+ NL  +N L K             PW L+FS+GR+LQAS +  W GK EN  AA A+    AKAN++AQLG+Y G       D + +E+N
Sbjct:   17 ANAICTDGKGILAADESTGTIKKRFDGAGIVNTEENRAAYRSLLFTTPGLGEYISGAILYEETLFQ---KNAEGVEMVELLKKQNIIPGIKVDKGLTVLAGTDGETTTMGLDGLAERCQKYYAQGARFAKWRTVLRIDEAKHQPTQLSIEETAHNLARYASVCQENGLVPIVEPEILQDGVHTIETDAYVTERVLSAVFKALNDHHILLEG------------------------------------CLLKPNMVTAGAEC--PVRPTSEEIARLTVRTLARTVPPALVGVTFLSGGQSEEMASVNLNAMNVLPKERR----------PWALTFSYGRALQASTIKTWAGKAENTKAAQAVLLARAKANSEAQLGKYQGS-----SDATANESN 354          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: XP_024397189.1 (fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [Physcomitrella patens] >XP_024397190.1 fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [Physcomitrella patens] >PNR39481.1 hypothetical protein PHYPA_019759 [Physcomitrella patens])

HSP 1 Score: 296.2 bits (757), Expect = 2.000e-76
Identity = 179/385 (46.49%), Postives = 226/385 (58.70%), Query Frame = 0
Query:   55 DALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVG 440
            + L+  A  +A PG+G+LAADES  T+GKRL +  + N E  R+A RE+LF  P +GEYLSG ILF ETL QK     +G+ F  +++  G++PG+KVD G   L  +  ET T G DDL KRC  +Y  GARFAKWRAV++I   A  PT   +Q N+  LARYA +CQ  GLVPIVEPEIL++G H+ E  A VTE  L+  Y  +    V LEG                                    TLLKP MV PG D+   E+ +PE  A+ T+  L+R VPPAVPGI+FLSGGQ+EE+AT+NL  +N L            TT PW LSFSFGR+LQA+VL  W GK+EN  AA       AKAN++A LG Y G
Sbjct:   10 EELQATAKYVATPGKGILAADESTGTIGKRLSSIKVENVEANRQALRELLFTTPGVGEYLSGVILFEETLYQKT---SDGKPFVDVMKENGIIPGIKVDKGTIELWGTNGETTTQGFDDLHKRCAAYYNAGARFAKWRAVLKIG--ALEPTELAIQQNAQGLARYAIICQENGLVPIVEPEILVDGLHSIEKCAEVTEKVLAACYKALNDQNVLLEG------------------------------------TLLKPNMVTPGSDA---EKVSPEVVAQYTVRTLQRTVPPAVPGIVFLSGGQSEEEATRNLNAMNALK-----------TTKPWTLSFSFGRALQATVLKTWGGKKENVKAAQDALHVRAKANSEATLGTYGG 339          
BLAST of NO11G01780 vs. NCBI_GenBank
Match: CBJ30268.1 (fructose-1,6-bisphosphate aldolase [Ectocarpus siliculosus])

HSP 1 Score: 294.7 bits (753), Expect = 5.700e-76
Identity = 184/407 (45.21%), Postives = 233/407 (57.25%), Query Frame = 0
Query:   40 VEAAKLATQLT-QEQKDALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGVKVDTGLEPL-GYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDETAQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARVTEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSPPILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPGIMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSLQASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYV-GPHPS 444
            V  A  +T ++  E KD L   A  +A PG+G+LA DES  T+GKRL + G+ N EE R+AYR +LF  P++G Y+SGAIL+ ETL Q      +G  F   LQ  GV+PG+KVDTGL PL G    ET  +G+D L++R + +YAQGARFAKWRAV++I      P+   +Q N+  LARYA   Q  GLVPIVEPEIL++G H   T A V E  L+ VY   +   V+LEG                                    +LLKP M  PG D T  E  TPEE A  T+ VL R VP AVPG+MFLSGG +EE+A+ NL L+N   ++            PW LSFS+GR+LQ S L AW GK EN  AA A     A+AN++A LG+YV G  PS
Sbjct:   32 VSKASTSTHMSLSEYKDELAQTAKAIAGPGKGILAVDESTATIGKRLASIGVDNTEENRQAYRGMLFTTPDLGNYISGAILYEETLFQ---NHADGTPFVDCLQKIGVIPGIKVDTGLSPLPGGHEVETWCSGLDGLVERAKKYYAQGARFAKWRAVLQITSDG-APSALSIQENAWGLARYARAVQEAGLVPIVEPEILMDGDHNMATTAAVQEKVLAAVYKACSDNGVYLEG------------------------------------SLLKPSMTCPGADCT--EPVTPEEVAATTVNVLERHVPAAVPGVMFLSGGMSEEEASINLNLMNSTPRKG-----------PWSLSFSYGRALQQSTLKAWQGKAENLEAAQAQLKARAQANSEANLGKYVAGSQPS 385          
The following BLAST results are available for this feature:
BLAST of NO11G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PRW44409.17.200e-7946.65fructose-1,6-bisphosphate aldolase [Chlorella soro... [more]
XP_002784645.11.200e-7845.23fructose-1,6-bisphosphate aldolase, putative [Perk... [more]
XP_005847258.12.100e-7845.32hypothetical protein CHLNCDRAFT_48836 [Chlorella v... [more]
XP_024384860.11.000e-7746.00fructose-bisphosphate aldolase 6, cytosolic-like [... [more]
XP_005709261.11.000e-7744.33fructose-bisphosphate aldolase, class I [Galdieria... [more]
XP_002785910.12.300e-7745.69fructose-1,6-bisphosphate aldolase, putative [Perk... [more]
XP_002768822.13.000e-7745.69fructose-1,6-bisphosphate aldolase, putative [Perk... [more]
XP_002779280.13.000e-7745.69fructose-1,6-bisphosphate aldolase, putative [Perk... [more]
XP_024397189.12.000e-7646.49fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
CBJ30268.15.700e-7645.21fructose-1,6-bisphosphate aldolase [Ectocarpus sil... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002085NSK002085Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01780.1NO11G01780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591288gene_5065Nannochloropsis oceanica (N. oceanica CCMP1779)gene
FBA1gene5460Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01780.1NO11G01780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01780 ID=NO11G01780|Name=NO11G01780|organism=Nannochloropsis oceanica|type=gene|length=1728bp
ATGTCCTCCTCCTCCGAGTCCGATTCCAATTCGGCCACAGCTCCCTCTCC
TCCTGTGACGGCTCCCGCTCCGGTATCCATCTCCTCGCATGGCCTTGAGG
CCTATCACACGCACCTCGTGGAGGCCGCCAAGCTGGCTACACAATTGACA
CAGGAGCAAAAGGACGCCCTCGAGACAATCGCGAATCAAATGGCCCGTCC
CGGGCGGGGTCTGCTGGCCGCCGACGAAAGCGTGCCCACTCTGGGCAAGC
GCCTAGTGGCCGCCGGGTTGGTCAATGATGAAGAGACGAGACGGGCTTAC
CGTGAGGTGTTGTTTGGTCACCCTGAAATGGGGGAGTACCTGAGTGGTGC
CATCCTCTTCTCCGAGACACTTGGACAGAAAGCAATCAAGGACCCAGAAG
GCCGTCTCTTTCCCGCATTGTTGCAAAGCAAGGGCGTCCTGCCCGGCGTT
AAGGTTGACACCGGCTTGGAACCCTTGGGGTACTCTCCGCGGGAGACGCA
TACCACAGGCATGGACGACCTGATGAAACGTTGCCAAGGGTTTTATGCGC
AAGGCGCGCGCTTTGCGAAATGGCGGGCTGTCATCCGAATCGATGAGACG
GCACAGTTGCCCACCCGCGCATGCATGCAGATCAACAGTGCAGAGCTCGC
GAGGTACGCGGCAGTGTGCCAGGCGTGTGGGCTTGTGCCCATTGTGGAGC
CGGAAATTTTGATTGAGGGAAGCCATACTGCGGAGACGTTTGCGAGGGTG
ACCGAGGCGGCGTTGAGCGAGGTTTATTACACCATGGCGCAAGCAAAGGT
GTTTTTGGAAGGGTATGTGAGGGAGGGGAGGGGGATAGGGATGGATAGGA
CGGAGGGGAGAACTCCCTCTTATCTTTCCTATCATCGCTTACCCTCCCCT
CCTATTCTTGCCATCAACAGCACGTTGCTCAAGCCCCAAATGGTCATGCC
AGGAGTCGATAGCACCCCAGAAGAGCGGCCTACCCCAGAAGAGGCAGCGC
GGCGAACGCTGGAAGTCCTGCGGAGACGCGTCCCACCTGCTGTCCCCGGC
ATTATGTTTTTGTCAGgtgcgtgggtgtgcaggcaccatctgctccactt
tgtttttggagcctctatcgcctctttgctctcatatcgtgtcttttccc
tggctttccctgtcattataaatactgcttgatcaacgctcacactgcac
tttcttgcttcctcttccgcccaactattctcttcaccagGGGGACAAAC
TGAAGAACAAGCCACGCAAAATCTGACCCTAATCAACCAGCTCGCCAAGC
GAGCTCCCTCCTCCTTCCGTCCCTCCCTCACGACTTGTCCCTGGATCTTA
AGCTTCTCCTTTGGTCGGTCGTTGCAAGCCTCAGTGCTGGCTGCGTGGAT
GGGAAAGGAAGAAAACTACACCGCAGCAGTGGCAATAGCAGGCGAGTTGG
CAAAGGCAAATGCTCAAGCACAACTAGGGGAGTATGTCGGTCCACATCCT
TCTCTGCTGAAAGACAAGAGCCTCCATGAAACAAACAGGGGTTTCTACGG
CCAGGGCGTCGCAGGAGTAGCTGGGGCAGCAGCGTCAGGAGAGAAGGAGA
AGACTGCTGAGGCTCCTACAGAGGGGTTGGCCGAGAAGCCGGGCGAGGAA
GAGGTAGGGAAGGCGGACATACAAGCGGCAGTTTCTGCTGATGCGACAGA
ACGAGAAAGCAGCAGGAGCACGTTGTAG
back to top

protein sequence of NO11G01780.1

>NO11G01780.1-protein ID=NO11G01780.1-protein|Name=NO11G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MSSSSESDSNSATAPSPPVTAPAPVSISSHGLEAYHTHLVEAAKLATQLT
QEQKDALETIANQMARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAY
REVLFGHPEMGEYLSGAILFSETLGQKAIKDPEGRLFPALLQSKGVLPGV
KVDTGLEPLGYSPRETHTTGMDDLMKRCQGFYAQGARFAKWRAVIRIDET
AQLPTRACMQINSAELARYAAVCQACGLVPIVEPEILIEGSHTAETFARV
TEAALSEVYYTMAQAKVFLEGYVREGRGIGMDRTEGRTPSYLSYHRLPSP
PILAINSTLLKPQMVMPGVDSTPEERPTPEEAARRTLEVLRRRVPPAVPG
IMFLSGGQTEEQATQNLTLINQLAKRAPSSFRPSLTTCPWILSFSFGRSL
QASVLAAWMGKEENYTAAVAIAGELAKANAQAQLGEYVGPHPSLLKDKSL
HETNRGFYGQGVAGVAGAAASGEKEKTAEAPTEGLAEKPGEEEVGKADIQ
AAVSADATERESSRSTL*
back to top
Synonyms
Publications