NO11G01770, NO11G01770 (gene) Nannochloropsis oceanica

Overview
NameNO11G01770
Unique NameNO11G01770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2752
Alignment locationchr11:581319..584070 -

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Properties
Property NameValue
DescriptionCoiled-coil domain-containing protein 130
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:581319..584070 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007590CWC16
Homology
BLAST of NO11G01770 vs. NCBI_GenBank
Match: EWM25035.1 (coiled-coil domain-containing protein 130 [Nannochloropsis gaditana])

HSP 1 Score: 442.2 bits (1136), Expect = 1.600e-120
Identity = 229/356 (64.33%), Postives = 266/356 (74.72%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWDGKASLNKITGSKGHNQFTQKGVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSKAVVAADAKKALAVKRAKLGINPANFSVPSTGSSSS 357
            MSSLAAAQADGYYRPPDWDGK+SL KITGSKGHNQ+TQ G++RFELPYNSWCLKC+ HIGKGVRFNA K+QAGNYFSTKIWEF MKCA+CKN L+IRTDPKNCDYEFVEGIRRREQEYD E+IGLPVLS EP+GA+   +  G A  P SANAP+ GVS DPL  LER KD  R+ NAAAARLQELM+A++RLEAD+SGVNRL+R KFR EKKVL++L+ ESA KG RFR+LP S ED +  P  LL GG+GGLTRARREGF K A+ K TSIMSSSIFD                                      +SKAV+ A+ +K LAVKRA+LGI+ ++F      ++S+
Sbjct:    1 MSSLAAAQADGYYRPPDWDGKSSLKKITGSKGHNQYTQSGIIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGAS---DLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKRGDPTK------------RSKAVLNAETQKDLAVKRARLGIDSSHFKASQAANAST 341          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: KZV18647.1 (hypothetical protein F511_03541 [Dorcoceras hygrometricum])

HSP 1 Score: 184.1 bits (466), Expect = 7.800e-43
Identity = 112/287 (39.02%), Postives = 149/287 (51.92%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDG 282
            MSSLAAA+AD +Y PP+WD  K  LNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A C++ ++I TDPK+C+Y  + G R++ +EYDAE     +L V+        + K K   P              LE  E+    K++      RLQ + DA   + +D   +N+ +R K R +KK + E EA S   GF  R+LP SEED      V  A             F K  K K   I ++SIF G
Sbjct:    1 MSSLAAARADNFYYPPEWDPKKGGLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCRHEIVIHTDPKSCEYVIISGARKKIEEYDAEDAETLLLPVD--------DDKNKLADPFYR-----------LEHQEKDMKKKKEAEPVLVRLQRVSDA---MHSDDYSLNKSLRAKLRDQKKRVAEEEASSRKSGFGLRLLPRSEEDAVAASRVKFA-----------TQFEKNRKNKRALIQATSIFSG 254          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_022878426.1 (coiled-coil domain-containing protein 130-like [Olea europaea var. sylvestris])

HSP 1 Score: 184.1 bits (466), Expect = 7.800e-43
Identity = 114/290 (39.31%), Postives = 152/290 (52.41%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKD---HKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDG 282
            MSSLAAA+AD +Y PP+W+  K  LNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A CK+ ++I+TDPKNC+Y  + G RR+ +EYDAE     +L V+        E + K               VDP   LE  ++    K++      RLQ + DA +   +D   +N+ +R K R +KK + E EA S   G   R+LP+SEED      +  A             F K  K K   I S+SIF G
Sbjct:    1 MSSLAAARADNFYYPPEWEPKKGGLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYLIISGARRKIEEYDAEDAETLLLPVD--------EDRNKL--------------VDPFYRLEHQEEDIKKKKEAEPVLVRLQRVSDARH---SDDYALNKALRAKLRDQKKRVAEEEAISRKSGLGIRLLPSSEEDAAAASRIKFA-----------SKFDKNRKDKRALIQSASIFSG 254          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_011077328.2 (coiled-coil domain-containing protein 130 [Sesamum indicum])

HSP 1 Score: 183.3 bits (464), Expect = 1.300e-42
Identity = 112/287 (39.02%), Postives = 149/287 (51.92%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDG 282
            MSSLAAA+AD +Y PP+WD  K  LNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A CK+ ++I+TDP+NC+Y  + G RR+ +EYDAE     VL V+        + + K   P              LE  E     K++      RLQ + DA +   +D   +N+ +R + R +KK + E EA S   G   R+LP+S ED      V  AG            F +  K K   I +SSIF G
Sbjct:    1 MSSLAAARADNFYYPPEWDPKKGGLNKFHGQHALREIARKIDQGILIIRFEMPFNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPQNCEYVIISGARRKIEEYDAEDAETLVLPVD--------DDRSKLADPFKR-----------LEHQEGDMKKKKEAEPVLVRLQRVSDARH---SDDYALNKSLRARLRDQKKRVAEEEANSRKAGLGIRLLPSSSEDAAAASHVKFAG-----------KFERNRKDKRALIHASSIFSG 254          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_019180047.1 (PREDICTED: coiled-coil domain-containing protein 130-like [Ipomoea nil])

HSP 1 Score: 181.0 bits (458), Expect = 6.600e-42
Identity = 108/285 (37.89%), Postives = 148/285 (51.93%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDW-DGKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIF 280
            MSSLAAA+AD +Y PP+W   K SLNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A C++ ++I+TDPKNC+Y  + G RR+ +EY+AE     VL VE        E + K                DP   LE  ++  ++   A  RL  L   ++   +D   +N+ +R + R +KK + E E  +   G  +R+LPASEED      +  A             F +  K K   I +SSIF
Sbjct:    1 MSSLAAARADNFYYPPEWTPKKGSLNKFNGQHALRERARKIDQGILIIRFEMPFNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCRHEIVIQTDPKNCEYVIISGARRKTEEYEAEDAETMVLPVE--------EDRSKL--------------ADPFYRLEHQEEDIKKKKEAEPRLVRLQKVSDARHSDDYALNKALRARLRGQKKRVAEEETAAKKMGLAYRLLPASEEDAAAASRIKFA-----------HKFDRNRKDKRALIHASSIF 252          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_015942760.1 (coiled-coil domain-containing protein 130 [Arachis duranensis] >XP_016176501.1 coiled-coil domain-containing protein 130 [Arachis ipaensis])

HSP 1 Score: 180.3 bits (456), Expect = 1.100e-41
Identity = 111/287 (38.68%), Postives = 150/287 (52.26%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDG 282
            MSSLAAA+AD +Y PP+WD  + SLNK  G     +  +K      ++RFE+P+N WC  C S I KGVRFNA K Q GNY+STKIW F MK A CK+ ++I+TDPKNC+Y  + G +++ +++D E      L  +        E KGK   P              LE  E     K++      RLQ L D+ +   AD   +N+ +R + R +KK + E EA S  +GF  R+LPASEED      V  +G            F K  + K   I +SSIF G
Sbjct:    1 MSSLAAARADNFYYPPEWDPSQGSLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWNFTMKSACCKHEIVIQTDPKNCEYLIISGAQKKTEDFDVEDAETFELPAD--------EVKGKLADPFYR-----------LEHQEEDLKKKKEAEPVLVRLQRLSDSRH---ADDYALNKSLRARLRNQKKRVAEEEAASRKRGFGIRLLPASEEDAAAAAKVKFSG-----------KFDKNRRDKRALINASSIFAG 254          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_017231172.1 (PREDICTED: coiled-coil domain-containing protein 130-like [Daucus carota subsp. sativus] >KZN06386.1 hypothetical protein DCAR_007223 [Daucus carota subsp. sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.500e-41
Identity = 114/288 (39.58%), Postives = 149/288 (51.74%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDW-DGKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEY---DAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIF 280
            MS+LAAA+AD +Y PP+W   + SLNK  G     +  +K      ++RFE+PYN WC  C S I KGVRFNA K Q GNY+STKIW F MK A C++ ++I+TDPKNC Y  + G +++ +EY   DAE++ LPV            E KGK   P              LE  E     K++      RLQ + DA +   AD   +N+++R+K R +KK + E EA S   G  FR+LP SE D      V  A             F K  K K   I SSSIF
Sbjct:    1 MSTLAAARADNFYYPPEWTPDQGSLNKFNGQHALRERARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRHEIVIQTDPKNCQYVIISGAQQKVEEYDNEDAETLALPV-----------DEEKGKLSDPFYR-----------LEHQENDIKKKKEAEPVLVRLQRVSDARH---ADDYALNKVLRSKLRNQKKRVAEEEAASRKMGLNFRLLPPSEADTAAASRVKFA-----------TKFHKNQKEKRALINSSSIF 252          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_016465188.1 (PREDICTED: coiled-coil domain-containing protein 130-like [Nicotiana tabacum])

HSP 1 Score: 179.9 bits (455), Expect = 1.500e-41
Identity = 111/285 (38.95%), Postives = 146/285 (51.23%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIF 280
            MSSLAAA+AD +Y PP+W   K SLNK  G     +  +K      ++RFE+PYN WC  CES I KGVRFNA K Q GNY+STKIW F MK A CK+ ++I+TDPKNC+Y  + G R++ ++YDAE     VL V+        E K K               VDP   LE  ++  ++   A   L  L   ++   +D   +NR +R K R +KK + E EA S   G   R+LP S ED     +V  A             F +  + K   I S SIF
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGSLNKFNGQHALRERARKIDQGILIIRFEMPYNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIISGARKKIEDYDAEDAETLVLPVD--------EDKSKL--------------VDPFYRLEHQEEDLKKKKEAEPLLVRLQRVSDSRHSDDYAMNRALRAKLRTQKKRVAEEEAASKKIGLGIRLLPPSAEDAATAASVKFA-----------HKFDRNRRDKRAIIYSGSIF 252          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: PIN23680.1 (C2C2-type Zn-finger protein [Handroanthus impetiginosus])

HSP 1 Score: 179.9 bits (455), Expect = 1.500e-41
Identity = 110/287 (38.33%), Postives = 149/287 (51.92%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIFDG 282
            MSSLAAA+AD +Y PP+W+  K  LNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A CK+ ++I+TDP+NC+Y  + G R++ +EYDAE     +L V+        + + K   P              LE  E     K++      RLQ + DA +   +D  G+N+ +R + R +KK + E EA S   G   R+LP SEED      V  A             F K  K K   I ++SIF G
Sbjct:    1 MSSLAAARADNFYYPPEWEPKKGGLNKFHGQHALRERARKIDQGILIIRFEMPFNVWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPQNCEYVIISGARKKVEEYDAEDAETLLLPVD--------DDRSKLADPFKR-----------LEHQEGDIKKKKEAEPVLVRLQRISDARH---SDDYGLNKSLRARLRGQKKRVAEEEANSRKAGLGIRLLPVSEEDAAAASRVKFA-----------NKFEKNRKDKRALIHTTSIFSG 254          
BLAST of NO11G01770 vs. NCBI_GenBank
Match: XP_010681412.1 (PREDICTED: coiled-coil domain-containing protein 130 [Beta vulgaris subsp. vulgaris] >KMT08458.1 hypothetical protein BVRB_6g141350 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41
Identity = 111/285 (38.95%), Postives = 147/285 (51.58%), Query Frame = 0
Query:    1 MSSLAAAQADGYYRPPDWD-GKASLNKITGSKGHNQFTQK-----GVVRFELPYNSWCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDPKNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPISANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGVNRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGGSGGLTRARREGFRKGAKAKFTSIMSSSIF 280
            MSSLAAA+AD +Y PP+WD  +  LNK  G     +  +K      ++RFE+P+N WC  CES I KGVRFNA K Q GNY+STKIW F MK A CK+ + I+TDPKNC+Y  V+G RR+ +EYDAE      L  +        E +GK               VDP   LE  ++  ++   A   L  L  A++   AD   +N+ +R + R +KK + E E+ S  KGF  R+LP S ED      V                F +  K K   I +SSIF
Sbjct:    1 MSSLAAARADNFYYPPEWDPTQGGLNKFHGQHALRERAKKIDQGILIIRFEMPFNIWCEGCESMIAKGVRFNAEKKQVGNYYSTKIWNFTMKSACCKHEIAIQTDPKNCEYVIVKGARRKIEEYDAEDAETLELPAD--------EERGKL--------------VDPFYRLEHQEEDLKKKKEADPVLVRLQRASDARHADDYAINKALRARLRSQKKRVAEEESVSRKKGFGIRLLPGSAEDAAAASRVKFP-----------RKFDENKKLKRALISTSSIF 252          
The following BLAST results are available for this feature:
BLAST of NO11G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25035.11.600e-12064.33coiled-coil domain-containing protein 130 [Nannoch... [more]
KZV18647.17.800e-4339.02hypothetical protein F511_03541 [Dorcoceras hygrom... [more]
XP_022878426.17.800e-4339.31coiled-coil domain-containing protein 130-like [Ol... [more]
XP_011077328.21.300e-4239.02coiled-coil domain-containing protein 130 [Sesamum... [more]
XP_019180047.16.600e-4237.89PREDICTED: coiled-coil domain-containing protein 1... [more]
XP_015942760.11.100e-4138.68coiled-coil domain-containing protein 130 [Arachis... [more]
XP_017231172.11.500e-4139.58PREDICTED: coiled-coil domain-containing protein 1... [more]
XP_016465188.11.500e-4138.95PREDICTED: coiled-coil domain-containing protein 1... [more]
PIN23680.11.500e-4138.33C2C2-type Zn-finger protein [Handroanthus impetigi... [more]
XP_010681412.11.900e-4138.95PREDICTED: coiled-coil domain-containing protein 1... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002086NSK002086Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01770.1NO11G01770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591284gene_5064Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100049g17gene5459Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01770.1NO11G01770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01770 ID=NO11G01770|Name=NO11G01770|organism=Nannochloropsis oceanica|type=gene|length=2752bp
CTTTGCTTGCGCCATGGTGTAATAAACCTCGCTCAACGCCGCCTCGGTCA
CCCTCGCAAACGTCTCCGCAGTATGGCTTCCCTCAATCAAAATTTCCGGC
TCCACAATGGGCACAAGCCCACACGCCTGGCACACTGCCGCGTACCTCGC
GAGCTCTGCACTGTTGATCTGCATGCATGCGCGGGTGGGCAACTGTGCCG
TCTCATCGATTCGGATGACAGCCCGCCATTTCGCAAAGCGCGCGCCTTGC
GCATAAAACCCTTGGCAACGTTTCATCAGGTCGTCCATGCCTGTGGTATG
CGTCTCCCGCGGAGAGTACCCCAAGGGTTCCAAGCCGGTGTCAACCTTAA
CGCCGGGCAGGACGCCCTTGCTTTGCAACAATGCGGGAAAGAGACGGCCT
TCTGGGTCCTTGATTGCTTTCTGTCCAAGTGTCTCGGAGAAGAGGATGGC
ACCACTCAGGTACTCCCCCATTTCAGGGTGACCAAACAACACCTCACGGT
AAGCCCGTCTCGTCTCTTCATCATTGACCAACCCGGCGGCCACTAGGCGC
TTGCCCAGAGTGGGCACGCTTTCGTCGGCGGCCAGCAGACCCCGCCCGGG
ACGGGCCATTTGATTCGCGATTGTCTCGAGGGCGTCCTTTTGCTCCTGTG
TCAATTGTGTAGCCAGCTTGGCGGCCTCCACGAGGTGCGTGTGATAGGCC
TCAAGGCCATGCGAGGAGATGGATACCGGAGCGGGAGCCGTCACAGGAGG
AGAGGGAGCTGTGGCCGAATTGGAATCGGACTCGGAGGAGGAGGACATGA
TGATACTGTGCGGGCTAGAGGAGGGTTGGGTTATGGAATTAGGGCGGCGA
TGGCAGCAATTCTGACAAACTTTGCGTACGGCTGACAATAATAAAGATCG
AGCAATGCGAGGTGATGGGGGCGTTAAAATGGCCGTGGTTATGGCAAGGT
GGTGGTGTGAGAGGAGACGTCAAAGCAACACAGGAGGAAGAGGAAGGCAT
GGCGGCGTTGCTAGACGCGCTGCCTATACTATGTTGGGTTTCATCACTCT
CTATTCACCACCACGCCGCACAACCATGCCACACAGGCACTGGTCGCAAG
ACCTGATACTTCGTCGATTGACCCCCTTCTCTGGACAATTTGGGCTGCCG
TATCTCTCACTCATCCTTTCTCTGTGCTGATCCCGACCCTGCAGTCGTCA
AGGCATGTCATCCTTAGCCGCGGCGCAAGCCGACGGGTATTACCGTCCCC
CAGACTGGGATGGCAAGGCTTCCTTGAACAAGATCACCGGCTCCAAAGgt
gtgtggtactatgtgtgatgtggtggttccagggtctgagtatcagattt
gtccctcgggactgaccctatccctccaccaattttaaatcccctcctac
agGCCACAACCAGTTCACACAAAAGGGTGTGGTCCGCTTCGAGCTTCCAT
ACAACAGCTGGTGTTTGAAATGTGAATCCCACATCGGCAAGGGCGTGCGC
TTCAATGCCACAAAAGTGCAGgtgcgctcgtgtgaaaggttgacaatggt
tactccgcgtgtgagtgtatgtgtgagatgttccttgtatatcttctatt
tcccgcgcatcccttgcaatgcatatgttgtgtccctctgccgcaatttt
taggcctcacgggtgctttccctattctccctccctcgccccccatccct
cctccctctcttgaagGCCGGCAACTACTTCTCCACGAAAATTTGGGAAT
TCCGCATGAAATGTGCCACGTGCAAGAATCTTCTCATCATCAGGACGGAC
CCGAAGAATTGCGATTACGAGTTTGTGGAGGGGATCCGGAGGCGCGAGCA
AGAATATGACGCAGAGTCTATTGGCTTGCCTGTGTTGTCGGTAGAGCCTT
CTGGAGCTGCCGGAGGTGTAGAAGGGAAAGGAAAAGCAGGTGTTCCTATA
TCAGCCAATGCGCCTCATGCGGGTGTGTCGGTCGATCCGTTGGAGGTCTT
GGAGAGAAGTAAGGACCACAAGCGACAGATGAATGCAGCAGCAGCCCGAT
TGCAGGAATTGATGGACGCAAACAACAGGCTAGAGGCAGATACAAGTGGA
GTGAATCGGCTCATGCGGACGAAATTCCGCCAAGAGAAGAAAGTGTTGCA
GGAATTGGAGGCCGAGAGTGCGGCGAAGGGTTTTCGGTTTCGAATGTTGC
CTGCCAGTGAGGAGGATGGGAAGGAGGGGCCGGCTGTGTTGCTCGCGGGA
GGGTCGGGCGGACTGACCCGTGCTCGGCGAGAAGGGTTTAGGAAAGGGGC
CAAGGCAAAATTCACTAGTATTATGAGCTCATCGATTTTCGATGGGGATG
GCAGTTCGCATAAGAAACGCGACACTCAGTCGTCGTCGTCATCGTCCGCG
TTGGTGGTATTGGGGCGGCGGGGGAGCAGCAGTAGGAGTAGCAGCAGTAG
AGACCTGCAGAGCAAGGCGGTGGTGGCTGCTGACGCGAAGAAAGCTTTAG
CTGTCAAGCGCGCCAAGTTGGGCATTAATCCGGCAAATTTTAGTGTGCCC
TCTACTGGTAGTTCGTCGTCTGTCTTGTCGACAGTGGTTGCGCGAAAGAA
AGGCTAAGATACACCTGGGGGCTGGAAACCTTGTACATTTTTGTAAGAAC
ACATGTATTATTAAATGTATTAAAGCTCTAAAAAGTCAAAGAAACAAAGG
CACACGCATGTGTTATATATATATATCCTGGAAAATAACATACCATCATG
GG
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protein sequence of NO11G01770.1

>NO11G01770.1-protein ID=NO11G01770.1-protein|Name=NO11G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MSSLAAAQADGYYRPPDWDGKASLNKITGSKGHNQFTQKGVVRFELPYNS
WCLKCESHIGKGVRFNATKVQAGNYFSTKIWEFRMKCATCKNLLIIRTDP
KNCDYEFVEGIRRREQEYDAESIGLPVLSVEPSGAAGGVEGKGKAGVPIS
ANAPHAGVSVDPLEVLERSKDHKRQMNAAAARLQELMDANNRLEADTSGV
NRLMRTKFRQEKKVLQELEAESAAKGFRFRMLPASEEDGKEGPAVLLAGG
SGGLTRARREGFRKGAKAKFTSIMSSSIFDGDGSSHKKRDTQSSSSSSAL
VVLGRRGSSSRSSSSRDLQSKAVVAADAKKALAVKRAKLGINPANFSVPS
TGSSSSVLSTVVARKKG*
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Synonyms
Publications