NO11G01660, NO11G01660 (gene) Nannochloropsis oceanica

Overview
NameNO11G01660
Unique NameNO11G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1610
Alignment locationchr11:548930..550539 -

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Properties
Property NameValue
DescriptionCholine-phosphate cytidylyltransferase b
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:548930..550539 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR004821Cyt_trans-like
Homology
BLAST of NO11G01660 vs. NCBI_GenBank
Match: EWM25024.1 (choline-phosphate cytidylyltransferase b [Nannochloropsis gaditana])

HSP 1 Score: 463.0 bits (1190), Expect = 9.400e-127
Identity = 217/283 (76.68%), Postives = 248/283 (87.63%), Query Frame = 0
Query:  124 DEGEREQI---DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETTLLTRKYLHDVATTTTKTIGDFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFRTPFIAAEVEGMQSVG------PVSKKMKR 398
            DEGE  ++   D +PKL+LLQEGD GTLTG+P+RLYADG+FDLFHFGH KALEQAKKLYPHT+LMVGCCSD+ TH+YKGITV+SE+ERYESLRHC+WVDEV+EDAPWV + +FL +HNIDYVCHDALPYADTSG+A+DGDVY HLKR GKFLETQRT+GISTSDIINR+IV YDDYVLRQLQRGYSAKEMNVPQWK TTLLT+KYLHDVATTT+KT+G+ Q SF+ LFNRNSDIRCTLRKRRKETWHR+S+L +TPF+     G    G      PVSKK+KR
Sbjct:  126 DEGETYEVGHNDLKPKLDLLQEGDPGTLTGVPIRLYADGVFDLFHFGHTKALEQAKKLYPHTYLMVGCCSDATTHRYKGITVLSEEERYESLRHCRWVDEVIEDAPWVAHKDFLVEHNIDYVCHDALPYADTSGEAEDGDVYLHLKRMGKFLETQRTEGISTSDIINRIIVRYDDYVLRQLQRGYSAKEMNVPQWKGTTLLTKKYLHDVATTTSKTLGELQLSFLDLFNRNSDIRCTLRKRRKETWHRVSALLKTPFVVMGEGGKTKRGWNAAGAPVSKKLKR 408          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: GAY04821.1 (choline-phosphate cytidylyltransferase B [Pythium insidiosum])

HSP 1 Score: 318.5 bits (815), Expect = 2.900e-83
Identity = 150/246 (60.98%), Postives = 190/246 (77.24%), Query Frame = 0
Query:  132 DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            +Y+P    L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+ +L+VGCC+D +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV+ DEFLA+H IDYVCHDALPY+DTSG+A DGDVY+ +K+ GKFLET+RT+GISTSD+I R+I  YD ++ R LQRGY+ KEMNVP  KE +    +   K  H+V     K IG   D QH F+ LF+++  +R +LRKRRK    R+S
Sbjct:  707 EYQPYRRELKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCNDELTHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVITDEFLAEHRIDYVCHDALPYSDTSGEASDGDVYARIKKMGKFLETKRTEGISTSDLIIRIIAEYDTFIRRNLQRGYTGKEMNVPFMKEQSIKFDMAVDKVKHNVDELVHKWIGKAEDMQHGFLDLFSKDGHLRTSLRKRRKIIKERLS 952          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: GAX99200.1 (choline-phosphate cytidylyltransferase B [Pythium insidiosum])

HSP 1 Score: 313.2 bits (801), Expect = 1.200e-81
Identity = 148/246 (60.16%), Postives = 188/246 (76.42%), Query Frame = 0
Query:  132 DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            +Y+P    L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+ +L+VGCC+D +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV+ D FLA+H ID VCHDALPY+DTSG+A DGDVY+ +K+ GKFLET+RT+GISTSD+I R+I  YD ++ R LQRGY+ KEMNVP  KE +    +   K  H+V     K IG   D QH F+ LF+++  +R +LRKRRK    R+S
Sbjct:  707 EYQPYRRELKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCNDELTHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVITDXFLAEHRIDXVCHDALPYSDTSGEASDGDVYARIKKMGKFLETKRTEGISTSDLIIRIIAEYDTFIRRNLQRGYTGKEMNVPFMKEQSIKFDMAVDKVKHNVDELVHKWIGKAEDMQHGFLDLFSKDGHLRTSLRKRRKIIKERLS 952          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: CCA26505.1 (cholinephosphate cytidylyltransferase B putative [Albugo laibachii Nc14] >CCA27395.1 cholinephosphate cytidylyltransferase B putative [Albugo laibachii Nc14])

HSP 1 Score: 309.7 bits (792), Expect = 1.300e-80
Identity = 147/247 (59.51%), Postives = 187/247 (75.71%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFR 375
            P  ++L +G+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YPH  L+VGC SD +THQ KG TVM++ ERYESLRHCKWVDEV+EDAPWV+ DEFL KH IDYVCHD+LPY+DTSG++ DGDVY  +K+ GKFLET+RTDGISTSD+INR+I  YD ++ R LQRGY+ KEMNV   KE +    +   K  HDV     K +G   + Q++F+ LF+R+  +R +LRKRR+    R++ + R
Sbjct:   75 PFRKVLVDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKQAYPHVFLLVGCNSDEMTHQLKGKTVMTDKERYESLRHCKWVDEVIEDAPWVITDEFLDKHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKEYDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKADELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: CCI49796.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 309.7 bits (792), Expect = 1.300e-80
Identity = 147/247 (59.51%), Postives = 188/247 (76.11%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFR 375
            P  ++L +G+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YPH +L+VGC SD +THQ KG TVM++ ERYESLRHCKWVDEVVEDAPWV+ DEFL +H IDYVCHD+LPY+DTSG++ DGDVY  +K+ GKFLET+RTDGISTSD+INR+I  YD ++ R LQRGY+ KEMNV   KE +    +   K  HDV     K +G   + Q++F+ LF+R+  +R +LRKRR+    R++ + R
Sbjct:   75 PFRKVLVDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKQAYPHVYLLVGCNSDEMTHQLKGKTVMTDKERYESLRHCKWVDEVVEDAPWVITDEFLDQHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKEYDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKADELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_024579536.1 (choline-phosphate cytidylyltransferase b [Plasmopara halstedii] >CEG43167.1 choline-phosphate cytidylyltransferase b [Plasmopara halstedii])

HSP 1 Score: 309.3 bits (791), Expect = 1.700e-80
Identity = 147/243 (60.49%), Postives = 186/243 (76.54%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            P  + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV++DEFL KH IDYVCHDALPY+DTSG+A +GDVY+ +K  GKFLET+RTDGISTS++I R+I  YD ++ R LQRGY+ K+MNVP  KE T    +   K  +DV     K +    D QH+F+ LF++   +R + RKRRK    R+S
Sbjct:   58 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGRTVMTDQERYESLRHCRWVDEVVEDAPWVLSDEFLEKHQIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTDGISTSELIIRIIAEYDTFIRRNLQRGYTGKDMNVPFIKEKTIKFDMAVDKVRNDVDGFVHKWMSKADDMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 300          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_002898492.1 (choline-phosphate cytidylyltransferase B [Phytophthora infestans T30-4] >EEY62969.1 choline-phosphate cytidylyltransferase B [Phytophthora infestans T30-4])

HSP 1 Score: 307.4 bits (786), Expect = 6.600e-80
Identity = 146/243 (60.08%), Postives = 186/243 (76.54%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            P  + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K  YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV++D+FL KH+IDYVCHDALPY+DTSG+A +GDVY+ +K  GKFLET+RTDGISTSD+I R+I  YD ++ R LQRGYS K+MNVP  KE +    +   K  +DV     K +    + QH+F+ LF++   +R + RKRRK    R+S
Sbjct:   57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKNAYPNTYLLVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDDFLEKHDIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: ETI42524.1 (hypothetical protein F443_12344 [Phytophthora parasitica P1569])

HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79
Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            P  + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K  GKFLET+RTDGISTSD+I R+I  YD ++ R L RGYS K+MNVP  KE +    +   K  +DV     K +    + QH+F+ LF++   +R + RKRRK    R+S
Sbjct:   57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: ETI42525.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79
Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            P  + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K  GKFLET+RTDGISTSD+I R+I  YD ++ R L RGYS K+MNVP  KE +    +   K  +DV     K +    + QH+F+ LF++   +R + RKRRK    R+S
Sbjct:   48 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 290          
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_008908662.1 (hypothetical protein PPTG_13939 [Phytophthora parasitica INRA-310] >ETK82548.1 hypothetical protein L915_12065 [Phytophthora parasitica] >ETL35934.1 hypothetical protein L916_11989 [Phytophthora parasitica] >ETM42423.1 hypothetical protein L914_11903 [Phytophthora parasitica] >ETN06160.1 hypothetical protein PPTG_13939 [Phytophthora parasitica INRA-310] >ETO71161.1 hypothetical protein F444_12444 [Phytophthora parasitica P1976] >ETP12240.1 hypothetical protein F441_12329 [Phytophthora parasitica CJ01A1] >ETP40369.1 hypothetical protein F442_12261 [Phytophthora parasitica P10297])

HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79
Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0
Query:  135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371
            P  + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K  GKFLET+RTDGISTSD+I R+I  YD ++ R L RGYS K+MNVP  KE +    +   K  +DV     K +    + QH+F+ LF++   +R + RKRRK    R+S
Sbjct:   57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299          
The following BLAST results are available for this feature:
BLAST of NO11G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25024.19.400e-12776.68choline-phosphate cytidylyltransferase b [Nannochl... [more]
GAY04821.12.900e-8360.98choline-phosphate cytidylyltransferase B [Pythium ... [more]
GAX99200.11.200e-8160.16choline-phosphate cytidylyltransferase B [Pythium ... [more]
CCA26505.11.300e-8059.51cholinephosphate cytidylyltransferase B putative [... [more]
CCI49796.11.300e-8059.51unnamed protein product [Albugo candida][more]
XP_024579536.11.700e-8060.49choline-phosphate cytidylyltransferase b [Plasmopa... [more]
XP_002898492.16.600e-8060.08choline-phosphate cytidylyltransferase B [Phytopht... [more]
ETI42524.12.500e-7960.08hypothetical protein F443_12344 [Phytophthora para... [more]
ETI42525.12.500e-7960.08hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008908662.12.500e-7960.08hypothetical protein PPTG_13939 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002099NSK002099Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01660.1NO11G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591239gene_5051Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100049g31gene5447Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01660.1NO11G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01660 ID=NO11G01660|Name=NO11G01660|organism=Nannochloropsis oceanica|type=gene|length=1610bp
CAGCCCTCTGCACTGCTCGGCCGCCTTCCCAGTGCTATCGTTGCCCGTTA
CCCACACGTGCTCCTCCCATTTCAAGTGCTGTCTTTCCAGCGTCAGCCCA
GCGGGTTCTCTCACCACCCCGAAGGCAGTATGGTTGTCCGGCAGAAGCGC
AGCGAGGTGTGCAAGAGCAATGGCACGAGCGATAGCAGCAAACGCCCCAG
GGCATTGAAAGAAGAGGAAGAGGAGACGGGGCGGCAGCAGGACAACCTGC
ATCCCCGTCACCAACAGCCACATACCTCCACCATCACCTCCTCTTCCTCA
ACTTTTATCTCTTCTTCCTCGTCGTCCTTCTCTTCTTCCGTAAAATTGAG
GTCCCAAAGCCCCGAAACGACTGTCCCCAGACATCAACAAGGGCGTCTCT
CCTCCTTCGCCTCCTCTTCCTCTTTTCCCGACTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCGCGGCTTCCTCCTCGGAAGACGAAGGCGAGACGGA
CGAGGGAGAGAGGGAACAGATCGATTACCGGCCCAAACTTGAACTCCTAC
AAGAAGGAGACCGGGGGACGTTGACTGGAATGCCGGTCCGTCTCTACGCC
GACGGTATTTTTGATTTGTTTCACTTTGGCCATGCTAAGGCCTTGGAGCA
GGCAAAAAAGCTGTATCCTCACACACATTTGATGGTGGGGTGTTGCAGTG
ATTCCGTTACTCACCAGTACAAAGGGATTACGGTCATGTCGGAAGACGAG
CGGTATGAGAGCTTGAGGCATTGCAAGTGGGTGGATGAGGTGGTGGAGGA
CGCACCGTGGGTTGTCAATGACGAGTTTTTGGCAAAGCATAATATAGATT
ATGTGTGCCATGATGCGTTGCCGTACGCGGATACGTCGGGGCAGGCGGAT
GACGGGGACGTGTATTCGCACTTGAAGCGGAACGGGAAGTTCTTGGAGAC
GCAGAGGACGGACGGCATCTCCACGTCGGACATAATTAACCGAGgtacgt
agtgtaagaagggaggggaggaagaggggagcgtgatgttcatcttaatg
tatattcctgattttgatccctcctccccttcttccctccctccttcctc
gccgtccttcagTGATCGTGCACTACGACGACTACGTCCTCCGGCAGCTC
CAACGGGGCTACAGCGCCAAGGAGATGAATGTACCCCAATGGAAGGAGAC
GACTCTGCTAACCAGAAAATACTTGCATGACGTTGCCACTACCACCACCA
AGACCATAGGGGATTTTCAGCACTCCTTCATTAGCCTTTTTAATCGGAAT
TCCGACATTCGCTGTACGTTGAGGAAGAGGAGGAAGGAGACCTGGCATCG
GATGAGCTCGCTTTTCCGCACACCTTTTATAGCCGCCGAAGTTGAGGGCA
TGCAGAGCGTTGGCCCGGTGAGCAAGAAAATGAAGCGGTAAAAGGAGTAA
GGTGTGAACGAGGAGAAGGAAACAATGTGTTCGCGTATTTCCAATTTTTT
GTGACTTCTTTTGCCCTACCTTTCTGCGACGAAGAGCCAAAGTGCAGGGG
AAGAAAAACTTCAAAAGGAGTCCTGTTCAACCAAAAGCTGGAGGGAGGGA
AGGAGGGAGG
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protein sequence of NO11G01660.1

>NO11G01660.1-protein ID=NO11G01660.1-protein|Name=NO11G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bp
MVVRQKRSEVCKSNGTSDSSKRPRALKEEEEETGRQQDNLHPRHQQPHTS
TITSSSSTFISSSSSSFSSSVKLRSQSPETTVPRHQQGRLSSFASSSSFP
DSSSSSSSSSSSAASSSEDEGETDEGEREQIDYRPKLELLQEGDRGTLTG
MPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGI
TVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYA
DTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQ
LQRGYSAKEMNVPQWKETTLLTRKYLHDVATTTTKTIGDFQHSFISLFNR
NSDIRCTLRKRRKETWHRMSSLFRTPFIAAEVEGMQSVGPVSKKMKR*
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