NO11G01660, NO11G01660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01660 vs. NCBI_GenBank
Match: EWM25024.1 (choline-phosphate cytidylyltransferase b [Nannochloropsis gaditana]) HSP 1 Score: 463.0 bits (1190), Expect = 9.400e-127 Identity = 217/283 (76.68%), Postives = 248/283 (87.63%), Query Frame = 0 Query: 124 DEGEREQI---DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETTLLTRKYLHDVATTTTKTIGDFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFRTPFIAAEVEGMQSVG------PVSKKMKR 398 DEGE ++ D +PKL+LLQEGD GTLTG+P+RLYADG+FDLFHFGH KALEQAKKLYPHT+LMVGCCSD+ TH+YKGITV+SE+ERYESLRHC+WVDEV+EDAPWV + +FL +HNIDYVCHDALPYADTSG+A+DGDVY HLKR GKFLETQRT+GISTSDIINR+IV YDDYVLRQLQRGYSAKEMNVPQWK TTLLT+KYLHDVATTT+KT+G+ Q SF+ LFNRNSDIRCTLRKRRKETWHR+S+L +TPF+ G G PVSKK+KR Sbjct: 126 DEGETYEVGHNDLKPKLDLLQEGDPGTLTGVPIRLYADGVFDLFHFGHTKALEQAKKLYPHTYLMVGCCSDATTHRYKGITVLSEEERYESLRHCRWVDEVIEDAPWVAHKDFLVEHNIDYVCHDALPYADTSGEAEDGDVYLHLKRMGKFLETQRTEGISTSDIINRIIVRYDDYVLRQLQRGYSAKEMNVPQWKGTTLLTKKYLHDVATTTSKTLGELQLSFLDLFNRNSDIRCTLRKRRKETWHRVSALLKTPFVVMGEGGKTKRGWNAAGAPVSKKLKR 408
BLAST of NO11G01660 vs. NCBI_GenBank
Match: GAY04821.1 (choline-phosphate cytidylyltransferase B [Pythium insidiosum]) HSP 1 Score: 318.5 bits (815), Expect = 2.900e-83 Identity = 150/246 (60.98%), Postives = 190/246 (77.24%), Query Frame = 0 Query: 132 DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 +Y+P L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+ +L+VGCC+D +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV+ DEFLA+H IDYVCHDALPY+DTSG+A DGDVY+ +K+ GKFLET+RT+GISTSD+I R+I YD ++ R LQRGY+ KEMNVP KE + + K H+V K IG D QH F+ LF+++ +R +LRKRRK R+S Sbjct: 707 EYQPYRRELKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCNDELTHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVITDEFLAEHRIDYVCHDALPYSDTSGEASDGDVYARIKKMGKFLETKRTEGISTSDLIIRIIAEYDTFIRRNLQRGYTGKEMNVPFMKEQSIKFDMAVDKVKHNVDELVHKWIGKAEDMQHGFLDLFSKDGHLRTSLRKRRKIIKERLS 952
BLAST of NO11G01660 vs. NCBI_GenBank
Match: GAX99200.1 (choline-phosphate cytidylyltransferase B [Pythium insidiosum]) HSP 1 Score: 313.2 bits (801), Expect = 1.200e-81 Identity = 148/246 (60.16%), Postives = 188/246 (76.42%), Query Frame = 0 Query: 132 DYRPKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 +Y+P L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+ +L+VGCC+D +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV+ D FLA+H ID VCHDALPY+DTSG+A DGDVY+ +K+ GKFLET+RT+GISTSD+I R+I YD ++ R LQRGY+ KEMNVP KE + + K H+V K IG D QH F+ LF+++ +R +LRKRRK R+S Sbjct: 707 EYQPYRRELKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCNDELTHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVITDXFLAEHRIDXVCHDALPYSDTSGEASDGDVYARIKKMGKFLETKRTEGISTSDLIIRIIAEYDTFIRRNLQRGYTGKEMNVPFMKEQSIKFDMAVDKVKHNVDELVHKWIGKAEDMQHGFLDLFSKDGHLRTSLRKRRKIIKERLS 952
BLAST of NO11G01660 vs. NCBI_GenBank
Match: CCA26505.1 (cholinephosphate cytidylyltransferase B putative [Albugo laibachii Nc14] >CCA27395.1 cholinephosphate cytidylyltransferase B putative [Albugo laibachii Nc14]) HSP 1 Score: 309.7 bits (792), Expect = 1.300e-80 Identity = 147/247 (59.51%), Postives = 187/247 (75.71%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFR 375 P ++L +G+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YPH L+VGC SD +THQ KG TVM++ ERYESLRHCKWVDEV+EDAPWV+ DEFL KH IDYVCHD+LPY+DTSG++ DGDVY +K+ GKFLET+RTDGISTSD+INR+I YD ++ R LQRGY+ KEMNV KE + + K HDV K +G + Q++F+ LF+R+ +R +LRKRR+ R++ + R Sbjct: 75 PFRKVLVDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKQAYPHVFLLVGCNSDEMTHQLKGKTVMTDKERYESLRHCKWVDEVIEDAPWVITDEFLDKHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKEYDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKADELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321
BLAST of NO11G01660 vs. NCBI_GenBank
Match: CCI49796.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 309.7 bits (792), Expect = 1.300e-80 Identity = 147/247 (59.51%), Postives = 188/247 (76.11%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMSSLFR 375 P ++L +G+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YPH +L+VGC SD +THQ KG TVM++ ERYESLRHCKWVDEVVEDAPWV+ DEFL +H IDYVCHD+LPY+DTSG++ DGDVY +K+ GKFLET+RTDGISTSD+INR+I YD ++ R LQRGY+ KEMNV KE + + K HDV K +G + Q++F+ LF+R+ +R +LRKRR+ R++ + R Sbjct: 75 PFRKVLVDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKQAYPHVYLLVGCNSDEMTHQLKGKTVMTDKERYESLRHCKWVDEVVEDAPWVITDEFLDQHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKEYDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKADELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_024579536.1 (choline-phosphate cytidylyltransferase b [Plasmopara halstedii] >CEG43167.1 choline-phosphate cytidylyltransferase b [Plasmopara halstedii]) HSP 1 Score: 309.3 bits (791), Expect = 1.700e-80 Identity = 147/243 (60.49%), Postives = 186/243 (76.54%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 P + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV++DEFL KH IDYVCHDALPY+DTSG+A +GDVY+ +K GKFLET+RTDGISTS++I R+I YD ++ R LQRGY+ K+MNVP KE T + K +DV K + D QH+F+ LF++ +R + RKRRK R+S Sbjct: 58 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGRTVMTDQERYESLRHCRWVDEVVEDAPWVLSDEFLEKHQIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTDGISTSELIIRIIAEYDTFIRRNLQRGYTGKDMNVPFIKEKTIKFDMAVDKVRNDVDGFVHKWMSKADDMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 300
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_002898492.1 (choline-phosphate cytidylyltransferase B [Phytophthora infestans T30-4] >EEY62969.1 choline-phosphate cytidylyltransferase B [Phytophthora infestans T30-4]) HSP 1 Score: 307.4 bits (786), Expect = 6.600e-80 Identity = 146/243 (60.08%), Postives = 186/243 (76.54%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 P + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHC+WVDEVVEDAPWV++D+FL KH+IDYVCHDALPY+DTSG+A +GDVY+ +K GKFLET+RTDGISTSD+I R+I YD ++ R LQRGYS K+MNVP KE + + K +DV K + + QH+F+ LF++ +R + RKRRK R+S Sbjct: 57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKNAYPNTYLLVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDDFLEKHDIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299
BLAST of NO11G01660 vs. NCBI_GenBank
Match: ETI42524.1 (hypothetical protein F443_12344 [Phytophthora parasitica P1569]) HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79 Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 P + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K GKFLET+RTDGISTSD+I R+I YD ++ R L RGYS K+MNVP KE + + K +DV K + + QH+F+ LF++ +R + RKRRK R+S Sbjct: 57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299
BLAST of NO11G01660 vs. NCBI_GenBank
Match: ETI42525.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569]) HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79 Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 P + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K GKFLET+RTDGISTSD+I R+I YD ++ R L RGYS K+MNVP KE + + K +DV K + + QH+F+ LF++ +R + RKRRK R+S Sbjct: 48 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 290
BLAST of NO11G01660 vs. NCBI_GenBank
Match: XP_008908662.1 (hypothetical protein PPTG_13939 [Phytophthora parasitica INRA-310] >ETK82548.1 hypothetical protein L915_12065 [Phytophthora parasitica] >ETL35934.1 hypothetical protein L916_11989 [Phytophthora parasitica] >ETM42423.1 hypothetical protein L914_11903 [Phytophthora parasitica] >ETN06160.1 hypothetical protein PPTG_13939 [Phytophthora parasitica INRA-310] >ETO71161.1 hypothetical protein F444_12444 [Phytophthora parasitica P1976] >ETP12240.1 hypothetical protein F441_12329 [Phytophthora parasitica CJ01A1] >ETP40369.1 hypothetical protein F442_12261 [Phytophthora parasitica P10297]) HSP 1 Score: 305.4 bits (781), Expect = 2.500e-79 Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 0 Query: 135 PKLELLQEGDRGTLTGMPVRLYADGIFDLFHFGHAKALEQAKKLYPHTHLMVGCCSDSVTHQYKGITVMSEDERYESLRHCKWVDEVVEDAPWVVNDEFLAKHNIDYVCHDALPYADTSGQADDGDVYSHLKRNGKFLETQRTDGISTSDIINRVIVHYDDYVLRQLQRGYSAKEMNVPQWKETT----LLTRKYLHDVATTTTKTIG---DFQHSFISLFNRNSDIRCTLRKRRKETWHRMS 371 P + L+EG+ GTLTG P+RLYADGIFDLFHFGHAKAL+Q K+ YP+T+L+VGCCSD +TH+ KG TVM++ ERYESLRHCKWVDEVVEDAPWV++DEFL KH IDYVCHDALPY+D SG+A +GDVY+ +K GKFLET+RTDGISTSD+I R+I YD ++ R L RGYS K+MNVP KE + + K +DV K + + QH+F+ LF++ +R + RKRRK R+S Sbjct: 57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKADEMQHNFLELFSKEGRLRTSFRKRRKIIKERLS 299 The following BLAST results are available for this feature:
BLAST of NO11G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01660 ID=NO11G01660|Name=NO11G01660|organism=Nannochloropsis oceanica|type=gene|length=1610bpback to top protein sequence of NO11G01660.1 >NO11G01660.1-protein ID=NO11G01660.1-protein|Name=NO11G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bpback to top Synonyms
Publications
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