NO11G01650, NO11G01650 (gene) Nannochloropsis oceanica

Overview
NameNO11G01650
Unique NameNO11G01650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2049
Alignment locationchr11:546195..548243 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:546195..548243 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO11G01650 vs. NCBI_GenBank
Match: EWM25046.1 (hypothetical protein Naga_100049g33 [Nannochloropsis gaditana])

HSP 1 Score: 491.5 bits (1264), Expect = 2.600e-135
Identity = 244/317 (76.97%), Postives = 272/317 (85.80%), Query Frame = 0
Query:  110 GPSIFIPQPSAA--VDTAE-VGSQVPP------PPIQPQSKLLQKFLTTDLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEMEKPTSFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGDCVLTPKGVEQCVGSDGGGGYIKEPV 418
            GP + +PQP+ A  +D  E   S   P      P   P+SKLL +F T+DLTSPGLSG GGAK+LFLP FLFGTWNATLCLK I LPLGERFVPPQ+LRSLNAV+MEKPTSF LRFYSTLPDT ENTLRVTLGEVPKSE+VPDRVYNTRSVLDAFYGYPAVGEIDYD+++NPL+MDVAFATMGPD++PLPSRRQQLLFNNLQS+RVRP+DLFVCSEYVRTVT+GPGRRVTVTDSETLSQYEL+++GRIEGKQRVA YLTPNPNT EG LFFE NNKAV +FDYSF M+KVGDCV+TPK VEQC   +G    + EPV
Sbjct:   55 GP-LSVPQPAEATGLDNVEPTSSTTSPDTPAINPDTTPRSKLLARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGDCVMTPKAVEQCTAPEGSYVKVNEPV 370          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: CEM11634.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 236.5 bits (602), Expect = 1.500e-58
Identity = 116/268 (43.28%), Postives = 179/268 (66.79%), Query Frame = 0
Query:  148 TTDLTSPGLSGFG-GAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEMEKPT-SFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERV-----RPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGD-CVLTPKGVEQCVGSD 408
            +  L  P L   G G ++L++P +LFGT+  T+   + D PLG+ +VP  + R+  AVE +    +++ RFY T+PDT +N L+ TLG++PKS +VPD  +N ++  D+F GY AV  +D+D+  NP +  + FA +GPDM+PLP RR+++  N +++  +       +D+FV SE+ R V++G  R VT TD ETL++Y   ++GR+ G+QR+A+YLTPNPN  EG+LFF+T  KAV ++DY+F M++  D CV+TPK V QC+  D
Sbjct:   89 SASLLVPSLFTLGPGQRMLYVPEWLFGTFTTTMRFMARDYPLGDEYVPDYLRRA--AVEQKGDIHTYMQRFYGTIPDTFDNKLKTTLGQLPKSAIVPDLAFNVKAAQDSFSGYSAVDNVDWDIRNNPGRYTINFARIGPDMRPLPPRRKEVFINGIRTSDISSAQDSSNDVFVTSEFTRVVSLGV-RLVTATDVETLTEYVHERDGRVVGRQRLAVYLTPNPNNREGSLFFQTGGKAVALYDYAFEMERTADRCVVTPKQVVQCIAED 353          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: GAQ79771.1 (hypothetical protein KFL_000380040 [Klebsormidium nitens])

HSP 1 Score: 184.9 bits (468), Expect = 5.300e-43
Identity = 109/272 (40.07%), Postives = 150/272 (55.15%), Query Frame = 0
Query:  142 LLQKFLTTDLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSL--NAVEMEKPTSFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVG---DCVLTPKGVEQCVGSDG 409
            L Q+     + +PG S   G   L+ P +LFGTW  T  L     PLGERF+   + R +      +     +  RFYSTLPDT  N LRVT G++P+S ++ DR +N +S+++A  GY  V E  YD   +P +  +  +  GP  +PL  RR +L  NN  SE     D FVC+E  R V +G  R+V V DSE + ++    + RI G +R A+YL P     +  L+FE  N AV + DY+ V+Q+V    DCVLTPKGV QCVG  G
Sbjct:   18 LSQRLSADRVYNPG-SALLGPFQLYYPQWLFGTWTVTAKLTGFKAPLGERFISTGLAREVADPRYGVGSAVQYEARFYSTLPDTWANKLRVTAGQLPESAIIADRAFNAKSLMEASLGYGGVQESVYDPRGSPTRQTIVLSPSGPQGQPLGPRRLELYINNRFSESDAAGD-FVCAELFRRVKLGV-RQVDVADSEAIYRFHRESDDRITGSKRRAIYLQP-----QDELYFEAGNCAVALLDYALVLQRVDPGQDCVLTPKGVTQCVGPGG 281          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: PRW44443.1 (hypothetical protein C2E21_6800 [Chlorella sorokiniana])

HSP 1 Score: 180.3 bits (456), Expect = 1.300e-41
Identity = 116/300 (38.67%), Postives = 156/300 (52.00%), Query Frame = 0
Query:  121 AVDTAEVGSQVPPPPIQPQSKLLQKFLTT-DLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEME----KPTSFLLRFYSTLPDTTENTLRVTLG-EVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGD----------CVLTPKGVEQCV 405
            AVD A  G+   P        L  +  T  ++  PG+      K LF P F+FG W   +    +  PLG +FVPP  L++  A   E       SF  RFYSTLP T +N LRV LG  +P+  +V DR +NT+   +AF GY AV  ++YD    PL+  V  + + PDM PLP RR +L  N+L SE    D  F+ SE  R V +G  R+V V D E + +Y L  +G I G+QR  LYL P     +   FFE   +AV ++DY++ M++V            CVLTPK V QCV
Sbjct:   18 AVDVAAQGAAPKP------GSLAARIATQGNVQQPGIQPPWAPKQLFYPRFMFGEWQVDMEFTGVRTPLGRQFVPPGFLQAAEAPAEEGGLGSRYSFRQRFYSTLPPTLDNELRVNLGLGMPQDAIVCDRAFNTKENTNAFLGYDAVESVEYDPRDAPLRETVTLSRLAPDMAPLPPRRLELYINHLSSEE-GLDGSFLTSELCRQVLLGV-RQVEVKDYEIMHEYRLQPDGSILGRQRSCLYLQP-----QEPRFFEAGGRAVAMYDYAYTMRRVPPPEDAPTAAVACVLTPKSVWQCV 304          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: PSC68943.1 (putative histone H2A variant 3 [Micractinium conductrix])

HSP 1 Score: 162.9 bits (411), Expect = 2.100e-36
Identity = 104/304 (34.21%), Postives = 143/304 (47.04%), Query Frame = 0
Query:  134 PPIQPQSKLLQKFLTTDLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEME----KPTSFLLRFYSTLPDTTENTLRVTLG-EVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSE----------------------RVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKV----------GDCVLTPKGV 401
            P ++P S   +      +  PG       K L+ P ++FG W   +   ++  PLG  FVP   L++  A   E       +F  RFYSTLPDT +N LR+ LG  +P+  ++ DR +NT+   DAF G+ AV  ++YD    PLK  V  +T+ PD+ PLP RR +L FN L SE                         P + F  SE  R V +G  R+V V D E + +Y L  EG +EG QR  LYL P         FF     AV ++DY F M+++            CV TPK V
Sbjct:  211 PSLRPNSLAARMATAGSIQQPGFMPPWAPKQLYFPRWMFGEWEVDMEFTALRTPLGREFVPAGFLQAAEAAPEEGGLGSQYAFRQRFYSTLPDTFDNNLRMNLGLGMPRDAIIADRAFNTKQTTDAFLGWDAVESVEYDPRDAPLKQVVTLSTLTPDLAPLPPRRLELFFNALSSEGDAAAVAAASLGGGGLYGDPGAAAEPQE-FYTSELCRQVLLG-ARQVEVKDYEVMHRYRLAGEGVVEGGQRSCLYLQPQEER-----FFAAGGWAVAVYDYRFTMRRLPAPEDAPWAAAACVQTPKAV 507          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: GAX29153.1 (hypothetical protein FisN_7Hh247 [Fistulifera solaris])

HSP 1 Score: 157.9 bits (398), Expect = 6.900e-35
Identity = 94/283 (33.22%), Postives = 150/283 (53.00%), Query Frame = 0
Query:  139 QSKLLQKFLTTDLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEMEKPT----SFLLRFYSTLPDTTENTLRVTLG-EVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGD-------------CVLTPKGVEQC 404
            Q+KL Q  +     SP    F GA  L+  PFLFG+WN T  LK    P G  +VP   L   +    E+      S+ + ++ST+  T  N   V LG  +P+++++ DR +N+ S+  A+     V ++ +D   +P K+ +  +++  DM+PL  RR ++     Q+E +  DD+F  +E  R VT+  GR V V+++ET++++  V    +    R+A+YLTPNPN+ EG L+ +T  KA+  FDY   MQ++ +             CV TPK V QC
Sbjct:   81 QTKLAQSRIGQLDLSPLQQPFLGATELYYAPFLFGSWNTTATLKRKIYPFGLNYVPSNSLIEGSPRYREETVGDRCSYEVHYFSTIAKTMANQATVNLGLGIPETKIIQDRAFNSVSLSAAYNQLSPVTDVVWDYRNDPTKVLLTLSSLSADMRPLGPRRAEIFLQARQAESL-GDDVFCSAEKSRAVTIA-GRDVVVSETETITEFRQVDRDHVSAISRIAVYLTPNPNSREGILWQQTEGKAIAFFDYELEMQRLKEDVPMANGKVERRACVRTPKDVIQC 361          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: GAX16524.1 (hypothetical protein FisN_7Lh247 [Fistulifera solaris])

HSP 1 Score: 153.3 bits (386), Expect = 1.700e-33
Identity = 92/283 (32.51%), Postives = 148/283 (52.30%), Query Frame = 0
Query:  139 QSKLLQKFLTTDLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVEMEKPT----SFLLRFYSTLPDTTENTLRVTLG-EVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGD-------------CVLTPKGVEQC 404
            Q+KL Q  +     SP      GA  L+  PFLFG+WN T  LK    P G  +VP   L   +    E+      S+ + +++T+ +T  N   V LG  +P+++++ DR +N  S+  A+     V ++ +D   +P K+ +A +++  DM+PL  RR ++     Q E +   D+F  +E  R VT+  GR V V+++ET++++  V    +    R+A+YLTPNPN+ EG L+ +T  KA+  FDY   MQ++ +             CV TPK V QC
Sbjct:   81 QTKLAQSRIGQLDFSPLQQPLLGANELYYAPFLFGSWNTTATLKRKIYPFGLDYVPSNSLIEGSPRYREETVGDRCSYEVHYFATIANTVANQATVNLGLGIPETKIIQDRAFNAMSLSTAYNQLSPVTDVVWDYRNDPTKVLLALSSLSADMRPLGPRRAEIFLQARQVESL-GGDVFCSAEKSRAVTIA-GRDVVVSETETITEFRKVDRDHVSAISRIAVYLTPNPNSREGILWQQTEGKAIAFFDYELEMQRLKEDVPMANGRAKQRACVRTPKDVIQC 361          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: XP_013903582.1 (hypothetical protein MNEG_3399 [Monoraphidium neglectum] >KIZ04563.1 hypothetical protein MNEG_3399 [Monoraphidium neglectum])

HSP 1 Score: 145.6 bits (366), Expect = 3.600e-31
Identity = 91/285 (31.93%), Postives = 135/285 (47.37%), Query Frame = 0
Query:  150 DLTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRSLNAVE----MEKPTSFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRSVLDAFYGYP-AVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERVRP-------------------DDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKV------GDCVLTPKGVEQCV 405
            D+T PG       +  + P +LFG W           PLG R+V P +L++  A      +    SF  R++STLPDT  N  R  LG +P+  ++ DR +NTR+  +A+   P AV  + YD    P ++ V F  +  DM+PLP +R ++   N+Q+  V P                      FV SE  R VT+G  R+  V D E ++ + L+  GR+  +QR  +YL P        L+F+   +AV ++DY     +V        CV TPK V QCV
Sbjct:    9 DVTHPGPPAPWAPRQTYFPKWLFGEWEVESTFTGFRAPLGPRYVDPSLLQAAQAPADLGGIGSSYSFSQRYFSTLPDTLANQARFNLGLLPEDAIIADRAFNTRASSNAYLQDPSAVRSVAYDPRAAPDRLTVEFQRVAADMQPLPPKRVEIYIQNIQAGEVDPVITEDGVPSAASPFWPPPNAPCFVASELCRQVTLGV-RQADVQDYEVITAFALLSPGRVAARQRTLIYLEPRDE-----LYFQARGRAVAVYDYKLQYTRVEAPAGANACVETPKDVVQCV 287          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: XP_005845147.1 (hypothetical protein CHLNCDRAFT_137285 [Chlorella variabilis] >EFN53045.1 hypothetical protein CHLNCDRAFT_137285 [Chlorella variabilis])

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25
Identity = 80/230 (34.78%), Postives = 110/230 (47.83%), Query Frame = 0
Query:  211 SFLLRFYSTLPDTTENTLRVTLG-EVPKSEVVPDRVYNTRSVLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSE-------RVRPDDLFVCSEYVRTVTVGP------------------GRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGD----------CVLTPKGVEQCV 405
            +F  R+YSTLPDT +N LRV LG  +P+  ++ DR +NTR   DAF G+ AV  ++YD    PL+  V  + + PD  PLP RR +L  NNL S+       +   D  F  SE  R     P                   R+V V D E +  +  +  G ++G+QR  LYL P         +F    +AV ++DY F M++V            CV TPK V QCV
Sbjct:   30 AFRQRWYSTLPDTLDNQLRVNLGLGMPRDAIIADRAFNTRQATDAFLGWAAVEGVEYDPRDAPLRATVELSRVAPDASPLPPRRLELYINNLASDGSTEGQGQEAGDVAFYASELCRQCLYLPXXXXXXXXXXXXXXXXVGARQVEVKDYEVMHSWRQLAPGLVQGRQRSCLYLQPQERR-----YFSAAGRAVAVYDYRFSMRRVAPEADAPAGAVACVPTPKDVIQCV 254          
BLAST of NO11G01650 vs. NCBI_GenBank
Match: OEU09315.1 (hypothetical protein FRACYDRAFT_248739 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 97.8 bits (242), Expect = 8.500e-17
Identity = 65/250 (26.00%), Postives = 113/250 (45.20%), Query Frame = 0
Query:  162 AKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVL-----RSLNAVEMEKPTSFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRSVLDAFYGY-PAVGE-IDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNNLQSERV--------------RPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEGKQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKV 391
            A+ ++ P +  G W     L S   P G  FVP + L     R+       + TS+ +R+ S++ D                 ++ DR +N  S+   +    P +G+ I+++  ++P  +     ++  DM+P+  RR ++     ++E V                      +E  RT+T+G G  V+  D E +++Y  +    I    RVA+YLTPNPN+ EG L+ + N KAV  +DY   M++V
Sbjct:  145 AQDIYYPSYFAGEWKVQSKLVSKIFPYGTDFVPSRSLIEGSPRNREEQVGGESTSYSVRYLSSIYDN-------NXXXXXXXXIISDRKFNMVSISRGYQQLSPVIGDSIEWNYKKDPTHLKFQTESVSADMRPIGPRRGEIYITARRTEEVPQXXXXXXXXXXXXXXXXXXXAAERSRTITIGTG-NVSANDQEVVTEYRQINNNLINAVSRVAVYLTPNPNSREGVLWQQINGKAVAFYDYELTMERV 386          
The following BLAST results are available for this feature:
BLAST of NO11G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25046.12.600e-13576.97hypothetical protein Naga_100049g33 [Nannochlorops... [more]
CEM11634.11.500e-5843.28unnamed protein product [Vitrella brassicaformis C... [more]
GAQ79771.15.300e-4340.07hypothetical protein KFL_000380040 [Klebsormidium ... [more]
PRW44443.11.300e-4138.67hypothetical protein C2E21_6800 [Chlorella sorokin... [more]
PSC68943.12.100e-3634.21putative histone H2A variant 3 [Micractinium condu... [more]
GAX29153.16.900e-3533.22hypothetical protein FisN_7Hh247 [Fistulifera sola... [more]
GAX16524.11.700e-3332.51hypothetical protein FisN_7Lh247 [Fistulifera sola... [more]
XP_013903582.13.600e-3131.93hypothetical protein MNEG_3399 [Monoraphidium negl... [more]
XP_005845147.11.700e-2534.78hypothetical protein CHLNCDRAFT_137285 [Chlorella ... [more]
OEU09315.18.500e-1726.00hypothetical protein FRACYDRAFT_248739 [Fragilario... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002101NSK002101Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01650.1NO11G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|566317gene_5050Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100049g33gene5446Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01650.1NO11G01650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01650 ID=NO11G01650|Name=NO11G01650|organism=Nannochloropsis oceanica|type=gene|length=2049bp
ATAAAAAGGAGGAAGGCGGCGGGTGGCGGCATGTTTTTAAGTTTTAATTT
GTAAGGGTGTGTGTGTTGTTAACAAGTGCACGCAATGATAATAATCATCA
AACGAAGCCCAAAGGCTGGGACAAGAAAGCCCCCTTGCTGTGGAGAGACG
GTAATGCACCAAAGCACGAAATATACACTCTCCAAGCGAAGAAGGGGCTT
CGTAGGACCCTATAACCCAGACTGGTCTGACAAGTTGACCCGACAAACAC
CACAACATTATTTTACATGCTGCCAGTGACTCGGACAAGATCCGGAAGAC
CCGTAAAATGAGATGCTCACAAAAAAATGCAAAAGCACTGCGTTCACTTA
CTCAAATCCGCCCAATAAACCTGTACAGACTGCATCCACAAGACCTCCAC
GTCGTGCCCTATCCCTCATCTCCCCGTCGCCAGTGGGTCCCTCTCCTCAC
AAACTAAAACTTAAAAGCATGCCGCTACCCGCCGCCTTCCTCCTTTTTAT
CGCATCACTGGTACTCCTCGCTGGGCCCGGCCACGCATACCGACCACCCC
ATCAGCCATTCCATCAGCAGCAGCACCACCGCAAAGATGCCCTTCAACGC
ACGACAGGAGCTGCCGCTGCGACTGCCGCTGCATTTTTTGGCCCCTCGAT
ATTTATACCACAGCCCTCAGCGGCAGTCGACACAGCCGAAGTCGGTAGCC
AGGTCCCCCCTCCTCCTATCCAACCCCAAAGCAAGCTTCTTCAAAAGTTC
CTCACCACAGATCTGACCAGTCCGGGCCTTTCTGGTTTTGGTGGTGCCAA
AATTCTGTTCCTACCGCCGTTTTTGTTCGGGACCTGGAATGCCACCCTCT
GCCTGAAGAGCATCGATCTCCCCCTTGGAGAGCGCTTTGTGCCCCCCCAA
GTTCTCCGCTCCCTCAACGCCGTAGAAATGGAAAAGCCAACGTCGTTCCT
ACTCCGGTTCTACTCCACCCTGCCGGACACGACCGAGAACACTTTGCGTG
TCACTTTGGGGGAAGTGCCTAAATCGGAAGTTGTCCCTGATCGCGTTTAC
AACACACGTTCCGTCCTCGATGCGTTCTACGGGTACCCAGCCGTGGGTGA
AATTGATTACGACTTGGCAAGAAATCCTTTGAAAATGGACGTGGCTTTCG
CGACGATGGGTCCAGATATGAAGCCATTACCTTCTAGGAGACAGCAATTG
TTGTTTAATAACCTGCAGAGCGAACGGGTGCGACCTGATGACTTATTTGT
CTGTTCTGAGTACGTCCGCACGGTCACGGTGGGACCGGGAAGAAGAGTAA
CGGTGACAGATTCAGAAACATTGTCGCAGTATGAGTTGGTGAAAGAGGGG
AGGATAGAGGGCAAGCAACGCGTGGCGCTTTATTTGACACCCAATCCCAA
CACTGCGGAAGGAGCCTTGTTTTTTGAGACGAACAATAAGgtttgtgttt
ctctctccctccctttccctctgtctcccctcttgtcgatctctccctcc
tctatatttctctttctttttctttcctcttttccccgcgcttatgtacc
tcctcccctcccttactctctcccacagGCAGTTACAATTTTTGACTACT
CGTTCGTGATGCAAAAGGTGGGAGACTGTGTGCTGACTCCCAAAGGAGTG
GAGCAATGCGTTGGGTCGGATGGAGGGGGAGGGTATATTAAAGAACCAGT
GCAGACAGAGGGGGAGGGGGGCGAGTTGTAGTAGTGTTGGCCGCAGTAGC
AGAATATAGGAATTTGCATGAAAACTGACAAACGGTGATGACGACAGGTA
ACGACAAAGGTGAAATCATACGTAAATATGCTAGTTTAAAAAATTGTCTT
GTAGAGGGAGGGAGAGACGAGACGTAAAATTATAAACTAGATGAACAACA
GTCTGGCAAGGACAGGAGGATATCATCGGAAAAGCACTGTGTGTTAAAAA
TGGAGATAAACGAGTTCCTCATGGCCATTCGTTTTCTGACGGCAGGGAGG
GTCAGGAGGGATCGGAACGCGTGAGTAATGTAAAAGCAAGCAGATGGCA
back to top

protein sequence of NO11G01650.1

>NO11G01650.1-protein ID=NO11G01650.1-protein|Name=NO11G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MLTKKCKSTAFTYSNPPNKPVQTASTRPPRRALSLISPSPVGPSPHKLKL
KSMPLPAAFLLFIASLVLLAGPGHAYRPPHQPFHQQQHHRKDALQRTTGA
AAATAAAFFGPSIFIPQPSAAVDTAEVGSQVPPPPIQPQSKLLQKFLTTD
LTSPGLSGFGGAKILFLPPFLFGTWNATLCLKSIDLPLGERFVPPQVLRS
LNAVEMEKPTSFLLRFYSTLPDTTENTLRVTLGEVPKSEVVPDRVYNTRS
VLDAFYGYPAVGEIDYDLARNPLKMDVAFATMGPDMKPLPSRRQQLLFNN
LQSERVRPDDLFVCSEYVRTVTVGPGRRVTVTDSETLSQYELVKEGRIEG
KQRVALYLTPNPNTAEGALFFETNNKAVTIFDYSFVMQKVGDCVLTPKGV
EQCVGSDGGGGYIKEPVQTEGEGGEL*
back to top
Synonyms
Publications