NO11G01550, NO11G01550 (gene) Nannochloropsis oceanica

Overview
NameNO11G01550
Unique NameNO11G01550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3480
Alignment locationchr11:517434..520913 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp-dependent clp protease atp-binding subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:517434..520913 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0019538protein metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0005515protein binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR004487Clp_protease_ATP-bd_su_ClpX
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
IPR019489Clp_ATPase_C
Homology
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_024571510.1 (atp-dependent clp atp-binding subunit [Plasmopara halstedii] >CEG35141.1 atp-dependent clp atp-binding subunit [Plasmopara halstedii])

HSP 1 Score: 374.8 bits (961), Expect = 5.100e-100
Identity = 225/517 (43.52%), Postives = 301/517 (58.22%), Query Frame = 0
Query:   54 TDFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPS--------VEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559
            T  RVL+P+EIY GL E+VIGQ+ VK  L+V VHNHY RL++ E  QA++                                     + HN  + +           AS    RFL EEI + +                                   +       +  H+R  PS        +E VEL+K+N++++GPTGSGKTLLAKTLA+L  VP+VIADATCLT AGYVGEDVES+L+KLYQAA  ++E T+RGI+YIDEIDK++++       RDVSGEGVQQALLK+LEG+ VNVP+ GGRKNP+GEHI IDTT+ILFICGGAFAGLE+ +  R S++SIGFGA++               G L  + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY  LFA+  V F+ T  AL  +A  AL K TGARGLRSI E AL ++M+ +PD  +V AV +D             +G    +L+RG   L  YL
Sbjct:  218 TKNRVLTPREIYNGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQAKK-------------------------------EAEASCVKHNAGSQH---------SRASTIGRRFLLEEIYSGSE---------------------KVAEVSQNLKEDEMATTPETTSSTHTRAEPSTSNDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSIARDVSGEGVQQALLKILEGSTVNVPEKGGRKNPRGEHISIDTTNILFICGGAFAGLEKQVTHRSSRSSIGFGAQMPNMHLKNSHQI----GRLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSGVEFYATEGALEAVAESALHKNTGARGLRSIFERALMDTMFDLPDMNDVRAVYVDEEA---------ILGRKQPVLIRGDMTLAEYL 660          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX98468.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Pythium insidiosum])

HSP 1 Score: 374.4 bits (960), Expect = 6.700e-100
Identity = 221/478 (46.23%), Postives = 292/478 (61.09%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSE---PGDMDTASGSVHRFLREEILNAASG-NPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527
            R+L+P+EIY GL ++VIGQ+ VK  LSV VHNHY RL + E  QAR+                                              L+L E    G + TA  S     ++  L +     P S+                                L    R H         VEL+K+N+L++GPTGSGKTLLAKTLA+L  VP+VIADATCLT AGYVGEDVES+L+KLYQA+  ++E T+RGI+YIDEIDK+S++       RDVSGEGVQQALLKMLEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE++IARR  +ASIGFGA +   +           G+L  + +P+DLV FG+IPE +GR P ++ T GLT  ++VQV+T+PK++L++QY  LFA+  V FH T  AL  +A +AL++ TGARGLRSI E AL ++M+ +PD ++V+AVV+D
Sbjct:   34 RLLTPREIYDGLNQYVIGQDHVKRILSVGVHNHYKRLQALELLQARRKRDKGVMGEEGETTL-------------------------TQQQQRLLLEEVWVDGLVHTAEDSTENEAQQRTLPSQDDLEPESVVS---------------------------STSLAMLERLHG--------VELDKTNVLLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQASNYNLEATQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGSLVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEQLIARRTQRASIGFGATMRNTKLQDSGQI----GSLLQRTDPEDLVSFGMIPEFIGRFPLLVSTTGLTQRELVQVLTEPKNSLVRQYQALFALNGVEFHATDGALDAVAELALKRNTGARGLRSIFERALIDTMFELPDRKDVSAVVVD 447          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX98464.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Pythium insidiosum])

HSP 1 Score: 374.4 bits (960), Expect = 6.700e-100
Identity = 221/478 (46.23%), Postives = 292/478 (61.09%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSE---PGDMDTASGSVHRFLREEILNAASG-NPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527
            R+L+P+EIY GL ++VIGQ+ VK  LSV VHNHY RL + E  QAR+                                              L+L E    G + TA  S     ++  L +     P S+                                L    R H         VEL+K+N+L++GPTGSGKTLLAKTLA+L  VP+VIADATCLT AGYVGEDVES+L+KLYQA+  ++E T+RGI+YIDEIDK+S++       RDVSGEGVQQALLKMLEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE++IARR  +ASIGFGA +   +           G+L  + +P+DLV FG+IPE +GR P ++ T GLT  ++VQV+T+PK++L++QY  LFA+  V FH T  AL  +A +AL++ TGARGLRSI E AL ++M+ +PD ++V+AVV+D
Sbjct:  172 RLLTPREIYDGLNQYVIGQDHVKRILSVGVHNHYKRLQALELLQARRKRDKGVMGEEGETTL-------------------------TQQQQRLLLEEVWVDGLVHTAEDSTENEAQQRTLPSQDDLEPESVVS---------------------------STSLAMLERLHG--------VELDKTNVLLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQASNYNLEATQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGSLVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEQLIARRTQRASIGFGATMRNTKLQDSGQI----GSLLQRTDPEDLVSFGMIPEFIGRFPLLVSTTGLTQRELVQVLTEPKNSLVRQYQALFALNGVEFHATDGALDAVAELALKRNTGARGLRSIFERALIDTMFELPDRKDVSAVVVD 585          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: OQR90264.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Thraustotheca clavata])

HSP 1 Score: 366.3 bits (939), Expect = 1.800e-97
Identity = 221/505 (43.76%), Postives = 301/505 (59.60%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEI-LNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559
            +VL+P+EIY GL ++VIGQ+ VK  L+V VHNHY RL    + +                                     + F +   S  +  +P         V++ ++  I L A +  P +L                          +G      +H ++      S++ VE++K+NIL++GPTGSGKTL+AKTLA+L  VPLVIADATCLT AGYVGEDVES+LYKLYQAA  D+E T+RGIIYIDEIDK+S++       RDVSGEGVQQALLKMLEG  VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE +++RR +++SIGF A +   +           G L  + EP DLV +G+IPE VGR P ++ T GL   ++V+VV++PK++L+KQY  LF++ +V+FHVT   L  IA +A+++ TGARGLR+ILE  L E+M+ +PD + V+AV +D  V           G+   +L+R    LE YL
Sbjct:  146 KVLTPREIYDGLNKYVIGQDNVKKALAVGVHNHYKRLSMNMKPKAPEP---------------------------------SAFDDHPKSLKMPEDP--------PVYQSMKHGIQLEAIAVPPGAL------------------------KNEGNAAEQKKHDKK-----ISMDEVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDVEATQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEHIVSRRTAQSSIGFDATMKDTKVTELDRV----GQLLTQSEPQDLVAYGLIPEFVGRFPVLVSTLGLNRPELVRVVSEPKNSLIKQYKALFSLHEVNFHVTDCGLNAIAELAIQRNTGARGLRAILERTLMETMFHIPDMKNVHAVYVDEEV---------IFGQKQPVLIRDGITLEQYL 567          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX25686.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Fistulifera solaris])

HSP 1 Score: 364.0 bits (933), Expect = 9.000e-97
Identity = 221/482 (45.85%), Postives = 288/482 (59.75%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLY-SKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGSV---RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDV-AVAGEG 534
            +V +PKEI  GL E+VIGQ  VK  LSV V+NH+ R+Y ++EQA                                     +   H+G +    L+E      +S SV   +     N   G+                                     + ++  + + A  VE VE++KSNIL+LGPTGSGKTLL KTLA+L+DVPLVIADATCLT AGYVGEDVES+L+KLY  +GQDIE  +RGI+YIDE DK+ ++  G+V   RDVSGEGVQ ALLK++EGNV+NVPK  GRKNP+G+ +QIDTT+ILFICGGAF+GLE +I RRV  ASIGFGA++              QG  F+   P DLV FG+IPE VGR P I+ T+GL ++ +V ++T+PK++++KQY  LFAM+DV+FHVT   L  IA  A  + TGARGLRSI +  L E+ YVVP    V+ V +D  AV G+G
Sbjct:  219 KVPTPKEIMTGLNEYVIGQRNVKVALSVGVYNHFKRIYVAEEQA--------------AAQQRKQAEMEEGAFMASANSIPINQLHDGPS----LAEMNLGQFSSSSVSPTME----NRTEGH-------------------------------------SFNSINNPKFAREVEDVEIDKSNILLLGPTGSGKTLLVKTLARLVDVPLVIADATCLTQAGYVGEDVESILFKLYLESGQDIERCQRGIVYIDEADKI-RKSGGNVSISRDVSGEGVQHALLKIVEGNVINVPKEPGRKNPRGDFLQIDTTNILFICGGAFSGLERIINRRVHAASIGFGAQM-----KKKVDDPTVQGRYFENAIPKDLVDFGMIPEFVGRFPIIVSTKGLDIDNLVDILTEPKNSIIKQYRRLFAMDDVNFHVTQDGLEAIAQTAFTRGTGARGLRSITDSVLMETQYVVPSRPNVHTVYVDAEAVNGQG 635          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX23044.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Fistulifera solaris])

HSP 1 Score: 362.8 bits (930), Expect = 2.000e-96
Identity = 218/481 (45.32%), Postives = 284/481 (59.04%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGSV---RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDV-AVAGEG 534
            ++ +PKEI  GL E+VIGQ  VK  LSV V+NH+ R++  E                                       +   H+G +    L+E      +S SV   +     N   G+                                     + ++  + + A  VE VE++KSNIL+LGPTGSGKTLL KTLA+L+DVPLVIADATCLT AGYVGEDVES+L+KLY  +GQDIE  +RGI+YIDE DK+ ++  G+V   RDVSGEGVQ ALLK++EGNV+NVPK  GRKNP+G+ +QIDTT+ILFICGGAF+GLE +I RRV  ASIGFGA++              QG  F+   P DLV FG+IPE VGR P I+ T+GL +E +V ++T+PK++++KQY  LFAM+DV+FHVT   L  IA  A  + TGARGLRSI +  L E+ YVVP    V+ V +D  AV G+G
Sbjct:  219 KIPTPKEIMTGLNEYVIGQRNVKVALSVGVYNHFKRIFVAE-------------AQAAAQQRKQAEMEEGAFMASANSIPINQLHDGPS----LAEMNLGQFSSSSVSPMME----NRTEGH-------------------------------------SFNSINNPKFARDVEDVEIDKSNILLLGPTGSGKTLLVKTLARLIDVPLVIADATCLTQAGYVGEDVESILFKLYLESGQDIERCQRGIVYIDEADKI-RKSGGNVSISRDVSGEGVQHALLKIVEGNVINVPKEPGRKNPRGDFLQIDTTNILFICGGAFSGLERIINRRVHAASIGFGAQM-----KKKVDDPTVQGRYFENAIPKDLVDFGMIPEFVGRFPIIVSTKGLDIENLVDILTEPKNSIIKQYRRLFAMDDVNFHVTQDGLEAIAQTAFTRGTGARGLRSITDSVLMETQYVVPSRPNVHTVYVDAEAVNGQG 635          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: CCA21310.1 (ATPdependent Clp protease ATPbinding subunit clpX putative [Albugo laibachii Nc14])

HSP 1 Score: 362.1 bits (928), Expect = 3.400e-96
Identity = 210/474 (44.30%), Postives = 291/474 (61.39%), Query Frame = 0
Query:   55 DFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGS--VRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527
            ++ +L+P+ + QGL+++VIGQE VK  LSV+VHNHY RL+  +  R                                     T+  +    N +     DM        R L E++L+  +    S                            G+ +  N            +E VEL+K+N+L+LGPTGSGKTLLAKTLA+L+ VP+VIADATCLT AGYVGEDVES+L+KLYQA+G +IE T+RGI+YIDEIDK+S++++ +   RDVSGEGVQQALLKMLEGN+VN+P+ GGRKNP+ + + IDT++ILFICGGAFAGLE+ IA R  ++SIGFGA +                A  + VEP+DL+ FG+IPE +GRLP I+ T+GL  ++MV+++++PK+++++Q+  LFA++ V F VT  AL  +A +ALEK TGARGLRSILE  L + M+ +PD   V AV +D
Sbjct:  120 EYSILTPRMMCQGLDDYVIGQESVKKVLSVAVHNHYKRLHLLDLMR---------------------------AQKEAAVAKATMLKSRIELNDLPEGLSDMS------RRLLLEQVLSGLNEKSWS--------------------------ESGVTVTEN---------LKILEDVELDKTNVLLLGPTGSGKTLLAKTLARLVKVPIVIADATCLTQAGYVGEDVESVLFKLYQASGYNIEATQRGIVYIDEIDKISRKNATTNIARDVSGEGVQQALLKMLEGNLVNIPEKGGRKNPRDDCVTIDTSNILFICGGAFAGLEKTIAARTCRSSIGFGAIM----PNTDLHMQKEAAACMENVEPEDLIAFGLIPEFIGRLPVIVSTRGLQKQEMVRILSEPKNSIVRQFKALFALQGVEFVVTKGALEAVAEIALEKNTGARGLRSILERTLVDVMFDLPDLPSVRAVHVD 521          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: OQR96586.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Achlya hypogyna])

HSP 1 Score: 361.3 bits (926), Expect = 5.800e-96
Identity = 219/477 (45.91%), Postives = 281/477 (58.91%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEI-LNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPS-VEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAV 530
            +VL+P+EIY GL ++VIGQE VK  L+V VHNHY RL    + +                                         N    + V  EP        SV++ ++  I L A +  PS+L                                          P P+  + VE++K+NIL++GPTGSGKTL+AKTLA+L  VPLVIADATCLT AGYVGEDVES+LYKLYQAA  D+E  +RGIIYIDEIDK+S++       RDVSGEGVQQALLKMLEG  VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE V++RR ++ASIGF +++   +           G L    EP DLV +G+IPE VGR P ++ T GLT  ++V+VV++PK++L+KQY  LFA+ DV FHVT   L  IA +A+ + TGARGLR+I E  L ++M+ VPD   V AV +D  V
Sbjct:  166 KVLTPREIYDGLNKYVIGQENVKKALAVGVHNHYKRLSMNFKPKSDADESHA---------------------------------NSPRISGVADEP--------SVYQSVKHGIQLEAIAVPPSALQADTSATVSP------------------------------ETPKPTDDDAVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDLEAAQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFIAIDTTNILFICGGAFAGLEHVVSRRTAQASIGFESQMKDTKVTDLDRV----GELLSLSEPQDLVAYGLIPEFVGRFPVLVSTLGLTRPELVRVVSEPKNSLIKQYRALFALHDVDFHVTTCGLDAIAELAVRRNTGARGLRAIFERTLMDTMFHVPDMAHVRAVYVDADV 567          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_008875916.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans] >ETV95215.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans])

HSP 1 Score: 360.5 bits (924), Expect = 1.000e-95
Identity = 205/472 (43.43%), Postives = 278/472 (58.90%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527
            +VL+P++I+ GL  +VIGQ+ VK  LSV VHNHY RL    + ++                                                       +   G++H       + A + +P                                        R  SR  P  + VEL+K+N++++GPTGSGKTL+AKTLA++  VPLVIADATCLT AGYVGEDVES+L+KLYQAA  D++  +RGI+YIDEIDK+S++       RDVSGEGVQQALLKMLEG VVNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE++++RR + +SIGFGA +   +           G L  + EP DLV +G+IPE VGR P ++ T GL+ +++V+V+T+PK++L+KQY  LFA+ DV FHV+   L  +A +A+++ TGARGLR+I E AL E+M+ +PD   VNAV +D
Sbjct:  194 QVLTPRQIFDGLNTYVIGQDAVKKALSVGVHNHYKRLSMHAKKKK----------------------------------------------------ASAEQNRGTIHSLGHGVHVEAINADP----------------------------------------RLESR--PKADEVELDKTNMMIVGPTGSGKTLMAKTLARMAQVPLVIADATCLTQAGYVGEDVESILFKLYQAANYDVDAAQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCVVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEKIVSRRTASSSIGFGARMPNTKLDELDNI----GQLLTQSEPQDLVSYGLIPEFVGRFPVVVSTLGLSQDELVRVLTEPKNSLVKQYQALFALNDVEFHVSRCGLEAVADLAVQRNTGARGLRAIFERALVETMFHIPDMPNVNAVYVD 567          
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_008619502.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Saprolegnia diclina VS20] >EQC27108.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Saprolegnia diclina VS20])

HSP 1 Score: 358.2 bits (918), Expect = 4.900e-95
Identity = 220/504 (43.65%), Postives = 291/504 (57.74%), Query Frame = 0
Query:   57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSV-EPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETY 558
            +VL+P+EIY GL ++VIGQE VK  L+V VHNHY RL    +  +                                        +G   ++ +S   D      SV   ++   L A +  PS                                +   + A   + P  +V + VE++K+NIL++GPTGSGKTL+AKTLA+L  VPLVIADATCLT AGYVGEDVES+LYKLYQAA  D+E  ++GIIYIDEIDK+S++       RDVSGEGVQQALLKMLEG  VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE +++RR + ASIGF +++   +           G L  + EP DLV +G+IPE VGR P ++ T GL   ++V+VV++PK++L+KQY  LFA+ +V FHVTP  L  IA +A+ + TGARGLR+I E  L ++M+ VPD + V AV +D         G    G    +LLRG   +  Y
Sbjct:  173 KVLTPREIYDGLNKYVIGQENVKKALAVGVHNHYKRLSMNFKPPEVP------------------------------------IDDGHPRSMRVSAMVDEPAIYQSVKHGIQ---LEAIAVPPS--------------------------------VVAAEGATPPTTPTVAVDDSVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDLEAAQKGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFIAIDTTNILFICGGAFAGLEHIVSRRTATASIGFESQMKDTKVTDLDRV----GELLTQSEPQDLVAYGLIPEFVGRFPVLVSTLGLNRHELVRVVSEPKNSLIKQYRALFALHNVDFHVTPCGLDAIAELAVRRNTGARGLRAIFERTLMDTMFHVPDMQHVRAVYVD---------GDVIFGAKQPVLLRGDVTIAEY 592          
The following BLAST results are available for this feature:
BLAST of NO11G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024571510.15.100e-10043.52atp-dependent clp atp-binding subunit [Plasmopara ... [more]
GAX98468.16.700e-10046.23ATP-dependent Clp protease ATP-binding subunit clp... [more]
GAX98464.16.700e-10046.23ATP-dependent Clp protease, ATP-binding subunit Cl... [more]
OQR90264.11.800e-9743.76ATP-dependent Clp protease ATP-binding subunit clp... [more]
GAX25686.19.000e-9745.85ATP-dependent Clp protease ATP-binding subunit Clp... [more]
GAX23044.12.000e-9645.32ATP-dependent Clp protease ATP-binding subunit Clp... [more]
CCA21310.13.400e-9644.30ATPdependent Clp protease ATPbinding subunit clpX ... [more]
OQR96586.15.800e-9645.91ATP-dependent Clp protease ATP-binding subunit clp... [more]
XP_008875916.11.000e-9543.43ATP-dependent Clp protease, ATP-binding subunit Cl... [more]
XP_008619502.14.900e-9543.65ATP-dependent Clp protease ATP-binding subunit Clp... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002110NSK002110Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01550.1NO11G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671212gene_5038Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100098g23gene5438Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01550.1NO11G01550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01550 ID=NO11G01550|Name=NO11G01550|organism=Nannochloropsis oceanica|type=gene|length=3480bp
AATTCCTCCTGAGTCCTCCGAGTACCAGAGTCATCGCTGCGCTCGCTCAC
ATCACGCGTGCCTTCATCTTTGTTTCCGAAGGAATGTCTTGACTCAGAAC
TTGGCCCTCTCCCGGATACGCCCTACATGAGCTGAAGACAGATTTTTTAA
CACATACGAGACGGCGCTTGACGCTGGAGCCGCTCCCTAGCCAGAGTGCG
TGGGACACTTTCCAAGGACAAGTAGTCAAAGCAACATCGATTCTGATAGT
TTTTGCCTTTCCCCGCCTGTTCCCCGTACACAGGCACTAAATATCACACG
AAGCCTACATTCCACAAGCAAGGATGTGGAGGCCAAGTGCCAGCGTCGCC
GCTGCCGCTGCTACCGCCCGCCGCCGCACACGAGGAACTGTCTTGACGCG
CTCGACCGGCATCAAATGCTTAAGCAGCAGCACCCCCTCCTCTTCCTCCT
CCCCGCCCTCATCCAACCCCACCACCACCCCGACCGATTTTCGCGTGCTT
TCGCCGAAGGAAATCTATCAAGGGCTGGAGGAACATGTTATTGGCCAAGA
GGGGGTCAAGACTGGGCTGAGTGTGTCAGTTCACAATCACTACTTGAGGC
TTTACAGCAAGGAACAAGCGCGGCAAGCCACAGAGGCAGCAGCCGCCGCT
GCCGAGCTCCGCAAAGGTTCCTCCTCCTTTTCTTCCTCATCTGCCTCGTC
TGTCTCGACATCAGTACGAGATACCGACACAATGACCATCTTTCACAATG
GTACCACCAGCAACTTGGTTCTATCTGAGCCAGGGGACATGGACACGGCA
TCCGGTTCTGTCCATCGCTTCCTGCGGGAAGAGATCCTCAACGCCGCCAG
TGGCAATCCAAGCTCGCTTAACAGTAGCAGCAGTAACAACACTCCAACCG
CTCCATCCCTCTCCTCTTCCAATTCCATTCCTCCACCAGCGGCACGAAAA
GGGATCAAAATTCGCCTCAACCAACACGCCCGCCGCCACTCCCGTCCTGC
GCCCTCCGTCGAGCCCGTGGAGCTCGAAAAATCAAATATTCTTATGCTGG
GTCCCACGGGGAGTGGTAAAACCCTTCTGGCCAAAACACTGGCCAAGCTG
CTGGATGTGCCCCTTGTCATTGCGGATGCCACTTGTCTGACCTCTGCAGG
GTATGTGGGCGAGGATGTGGAAAGCATGTTGTACAAGCTCTATCAGGCGG
CGGGACAAGACATCGAACTGACGGAACGCGGGATTATTTACATCGACGAA
ATCGACAAATTGAGCAAGAGGGATAGCGGTTCGGTGAGAGACGTGTCTGG
GGAGGGCGTCCAGCAAGCCTTGCTGAAGATGCTCGAAGGGAATGTGGTGA
ACGTTCCCAAAGCGGGAGGGAGGAAGAATCCCAAAGGGGAGCATATCCAG
ATTGATACAACCGACATTCTCTTCATTTGTGGGGGGGCGTTCGCGGGGTT
GGAAGAGGTGATTGCCCGGAGGGTCAGCAAGGCCTCGATTGGGTTCGGGG
CGGAGTTGGGGGGGGGCAGGGAGGGAGGGAGGGAGGGAAGGAAGGAGTAC
CAGGGGGCCTTGTTCGATAAGGTGGAGCCAGACGATTTGGTCCAGTTTGG
AGTGATTCCAGAACTGGTGGGGAGGTTGCCGCAGATAgtgagtatatata
tatatatgtagagagagagagagagagagggagagagagagagggacgga
gggacggagggatggagggacggagggagagtgtccactacttaatcacc
cccgccagctgcccccccacatgcttctcgcatcgtgaagtttgtacact
gatcactctgtcttcccctccctccctccctcccttcctccctcccttcc
tccctccctccttcgcagCTGCACACTCAAGGCCTGACATTGGAACAGAT
GGTTCAGGTGGTCACCCAGCCCAAGCACGCGCTGATGAAGCAATACGCGT
ACTTGTTTGCCATGGAAGATGTCTCCTTCCACGTCACTCCACCGGCCCTT
CGACGCATAGCCGCTATGGCCCTGGAGAAAAAAACGGGGGCGAGGGGGCT
GAGGTCCATCTTGGAGTATGCACTGAAGGAGAGCATGTATGTGGTGCCGG
ACGACGAGGAGGTTAATGCCGTGGTTCTCGACGTGGCGGTAGCGGGAGAG
GGAGGGGAGGGGGGGAAGGCGGTTGGGGAGTTGACgtaagtaaagagcca
ggggagggagggagggagggaggaaaggagggagagagggtttggcaata
ggtgctgaaggagagcgtggatgcggacgctggggttctgatggatgtaa
aggaggaggggggtgaggcagaataaggggtggagggagggagaaaggga
gggagggcaggcgagtcatgtgtgagatcatgcttgtgcgtgagggcgtc
ctgctcctccttagtttcccagaaacaacaatttcaatttttgtatctac
ttccccgtgcttttcatgctcgcctctccttccctcccaccctcattcct
tccttccttccttccctccccctctttctctcacacagAGTCCTGTTACT
CCGTGGCCAAGACATCCTCGAAACGTACCTACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGATGAAGAGGCAGCAGCA
GCAGCAGCATCTGGGTCTCTAGCGGGGGGGGGAGGAGGAGAAGAGGAGGT
GGGTGAAGTGGCAGCAGCCTAGGGCCAGGGATGGAAAGAAGGGAGCATGC
CCTGCCGATGCACAACTTAGCGGGAGCAGCAGGTGCCGTGCGATAGGTGG
CGAGGAAGGATAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGTGGGTTAGG
TACGGTAGTGACTGGAGTTGCACCAGATCTGGCTCCAAGGGGAGGGAGGG
AAGGAGGGAGGGAAGGAGGAAGGCGAGGAGGGAGGGATTGAGACAAGAAC
TTGTATATATGTCGTCACATGAGAGAGGGGAGCTTAGTGGTTATAAATGC
CTACGTATGTATGATTGTGAGAGGGAGCGGAGGAAGACGGGAAGGAGGGA
GGATAAGATAAAAAGTGTGAAATGCGAGGAACGTGCGCGAGGGAAAGAGT
GGACGAGATAAGGAAGGGATAGCGTGTGAAGGTCATTACATAGAGGGAAG
AGAACCAGAGAAATGAAAGGGGGGGGGGGGAAAGCAAGAGGGGGCAAGCG
TATGGAATGGTGTGGGTGTGAGAGAATGTGAGCGGATGTGGGCGGGTTTT
AAGATAGAACCAGCGAACCAGCGAAAGAGAGAAAGAGAAAGCCAGGGAGA
GAAACAGGAGATCGATAGTCGTATTTATATTTTGTATATACGGGCCAGAA
ATGCATCCCTCATGGCACAAAAGAAGGAAGAGGGGGAAGGGGAGGGAGAC
TTTCTCAGTGTCGAGGAGCCTGGGCGAAAAGAAATAGGAAACGAAAGAAG
GGCGATGCGAGAGAGGACACCAACGTCAGA
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protein sequence of NO11G01550.1

>NO11G01550.1-protein ID=NO11G01550.1-protein|Name=NO11G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp
MWRPSASVAAAAATARRRTRGTVLTRSTGIKCLSSSTPSSSSSPPSSNPT
TTPTDFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQAR
QATEAAAAAAELRKGSSSFSSSSASSVSTSVRDTDTMTIFHNGTTSNLVL
SEPGDMDTASGSVHRFLREEILNAASGNPSSLNSSSSNNTPTAPSLSSSN
SIPPPAARKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKT
LLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELT
ERGIIYIDEIDKLSKRDSGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGR
KNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRE
GGREGRKEYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMV
QVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLR
SILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRG
QDILETYLQQQQQQQQQQQQQQQQRDEEAAAAAASGSLAGGGGGEEEVGE
VAAA*
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Synonyms
Publications