NO11G01550, NO11G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_024571510.1 (atp-dependent clp atp-binding subunit [Plasmopara halstedii] >CEG35141.1 atp-dependent clp atp-binding subunit [Plasmopara halstedii]) HSP 1 Score: 374.8 bits (961), Expect = 5.100e-100 Identity = 225/517 (43.52%), Postives = 301/517 (58.22%), Query Frame = 0 Query: 54 TDFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPS--------VEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 T RVL+P+EIY GL E+VIGQ+ VK L+V VHNHY RL++ E QA++ + HN + + AS RFL EEI + + + + H+R PS +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG+ VNVP+ GGRKNP+GEHI IDTT+ILFICGGAFAGLE+ + R S++SIGFGA++ G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ V F+ T AL +A AL K TGARGLRSI E AL ++M+ +PD +V AV +D +G +L+RG L YL Sbjct: 218 TKNRVLTPREIYNGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQAKK-------------------------------EAEASCVKHNAGSQH---------SRASTIGRRFLLEEIYSGSE---------------------KVAEVSQNLKEDEMATTPETTSSTHTRAEPSTSNDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSIARDVSGEGVQQALLKILEGSTVNVPEKGGRKNPRGEHISIDTTNILFICGGAFAGLEKQVTHRSSRSSIGFGAQMPNMHLKNSHQI----GRLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSGVEFYATEGALEAVAESALHKNTGARGLRSIFERALMDTMFDLPDMNDVRAVYVDEEA---------ILGRKQPVLIRGDMTLAEYL 660
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX98468.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Pythium insidiosum]) HSP 1 Score: 374.4 bits (960), Expect = 6.700e-100 Identity = 221/478 (46.23%), Postives = 292/478 (61.09%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSE---PGDMDTASGSVHRFLREEILNAASG-NPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527 R+L+P+EIY GL ++VIGQ+ VK LSV VHNHY RL + E QAR+ L+L E G + TA S ++ L + P S+ L R H VEL+K+N+L++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQA+ ++E T+RGI+YIDEIDK+S++ RDVSGEGVQQALLKMLEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE++IARR +ASIGFGA + + G+L + +P+DLV FG+IPE +GR P ++ T GLT ++VQV+T+PK++L++QY LFA+ V FH T AL +A +AL++ TGARGLRSI E AL ++M+ +PD ++V+AVV+D Sbjct: 34 RLLTPREIYDGLNQYVIGQDHVKRILSVGVHNHYKRLQALELLQARRKRDKGVMGEEGETTL-------------------------TQQQQRLLLEEVWVDGLVHTAEDSTENEAQQRTLPSQDDLEPESVVS---------------------------STSLAMLERLHG--------VELDKTNVLLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQASNYNLEATQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGSLVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEQLIARRTQRASIGFGATMRNTKLQDSGQI----GSLLQRTDPEDLVSFGMIPEFIGRFPLLVSTTGLTQRELVQVLTEPKNSLVRQYQALFALNGVEFHATDGALDAVAELALKRNTGARGLRSIFERALIDTMFELPDRKDVSAVVVD 447
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX98464.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Pythium insidiosum]) HSP 1 Score: 374.4 bits (960), Expect = 6.700e-100 Identity = 221/478 (46.23%), Postives = 292/478 (61.09%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSE---PGDMDTASGSVHRFLREEILNAASG-NPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527 R+L+P+EIY GL ++VIGQ+ VK LSV VHNHY RL + E QAR+ L+L E G + TA S ++ L + P S+ L R H VEL+K+N+L++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQA+ ++E T+RGI+YIDEIDK+S++ RDVSGEGVQQALLKMLEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE++IARR +ASIGFGA + + G+L + +P+DLV FG+IPE +GR P ++ T GLT ++VQV+T+PK++L++QY LFA+ V FH T AL +A +AL++ TGARGLRSI E AL ++M+ +PD ++V+AVV+D Sbjct: 172 RLLTPREIYDGLNQYVIGQDHVKRILSVGVHNHYKRLQALELLQARRKRDKGVMGEEGETTL-------------------------TQQQQRLLLEEVWVDGLVHTAEDSTENEAQQRTLPSQDDLEPESVVS---------------------------STSLAMLERLHG--------VELDKTNVLLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQASNYNLEATQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGSLVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEQLIARRTQRASIGFGATMRNTKLQDSGQI----GSLLQRTDPEDLVSFGMIPEFIGRFPLLVSTTGLTQRELVQVLTEPKNSLVRQYQALFALNGVEFHATDGALDAVAELALKRNTGARGLRSIFERALIDTMFELPDRKDVSAVVVD 585
BLAST of NO11G01550 vs. NCBI_GenBank
Match: OQR90264.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Thraustotheca clavata]) HSP 1 Score: 366.3 bits (939), Expect = 1.800e-97 Identity = 221/505 (43.76%), Postives = 301/505 (59.60%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEI-LNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 +VL+P+EIY GL ++VIGQ+ VK L+V VHNHY RL + + + F + S + +P V++ ++ I L A + P +L +G +H ++ S++ VE++K+NIL++GPTGSGKTL+AKTLA+L VPLVIADATCLT AGYVGEDVES+LYKLYQAA D+E T+RGIIYIDEIDK+S++ RDVSGEGVQQALLKMLEG VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE +++RR +++SIGF A + + G L + EP DLV +G+IPE VGR P ++ T GL ++V+VV++PK++L+KQY LF++ +V+FHVT L IA +A+++ TGARGLR+ILE L E+M+ +PD + V+AV +D V G+ +L+R LE YL Sbjct: 146 KVLTPREIYDGLNKYVIGQDNVKKALAVGVHNHYKRLSMNMKPKAPEP---------------------------------SAFDDHPKSLKMPEDP--------PVYQSMKHGIQLEAIAVPPGAL------------------------KNEGNAAEQKKHDKK-----ISMDEVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDVEATQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEHIVSRRTAQSSIGFDATMKDTKVTELDRV----GQLLTQSEPQDLVAYGLIPEFVGRFPVLVSTLGLNRPELVRVVSEPKNSLIKQYKALFSLHEVNFHVTDCGLNAIAELAIQRNTGARGLRAILERTLMETMFHIPDMKNVHAVYVDEEV---------IFGQKQPVLIRDGITLEQYL 567
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX25686.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Fistulifera solaris]) HSP 1 Score: 364.0 bits (933), Expect = 9.000e-97 Identity = 221/482 (45.85%), Postives = 288/482 (59.75%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLY-SKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGSV---RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDV-AVAGEG 534 +V +PKEI GL E+VIGQ VK LSV V+NH+ R+Y ++EQA + H+G + L+E +S SV + N G+ + ++ + + A VE VE++KSNIL+LGPTGSGKTLL KTLA+L+DVPLVIADATCLT AGYVGEDVES+L+KLY +GQDIE +RGI+YIDE DK+ ++ G+V RDVSGEGVQ ALLK++EGNV+NVPK GRKNP+G+ +QIDTT+ILFICGGAF+GLE +I RRV ASIGFGA++ QG F+ P DLV FG+IPE VGR P I+ T+GL ++ +V ++T+PK++++KQY LFAM+DV+FHVT L IA A + TGARGLRSI + L E+ YVVP V+ V +D AV G+G Sbjct: 219 KVPTPKEIMTGLNEYVIGQRNVKVALSVGVYNHFKRIYVAEEQA--------------AAQQRKQAEMEEGAFMASANSIPINQLHDGPS----LAEMNLGQFSSSSVSPTME----NRTEGH-------------------------------------SFNSINNPKFAREVEDVEIDKSNILLLGPTGSGKTLLVKTLARLVDVPLVIADATCLTQAGYVGEDVESILFKLYLESGQDIERCQRGIVYIDEADKI-RKSGGNVSISRDVSGEGVQHALLKIVEGNVINVPKEPGRKNPRGDFLQIDTTNILFICGGAFSGLERIINRRVHAASIGFGAQM-----KKKVDDPTVQGRYFENAIPKDLVDFGMIPEFVGRFPIIVSTKGLDIDNLVDILTEPKNSIIKQYRRLFAMDDVNFHVTQDGLEAIAQTAFTRGTGARGLRSITDSVLMETQYVVPSRPNVHTVYVDAEAVNGQG 635
BLAST of NO11G01550 vs. NCBI_GenBank
Match: GAX23044.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Fistulifera solaris]) HSP 1 Score: 362.8 bits (930), Expect = 2.000e-96 Identity = 218/481 (45.32%), Postives = 284/481 (59.04%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGSV---RDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDV-AVAGEG 534 ++ +PKEI GL E+VIGQ VK LSV V+NH+ R++ E + H+G + L+E +S SV + N G+ + ++ + + A VE VE++KSNIL+LGPTGSGKTLL KTLA+L+DVPLVIADATCLT AGYVGEDVES+L+KLY +GQDIE +RGI+YIDE DK+ ++ G+V RDVSGEGVQ ALLK++EGNV+NVPK GRKNP+G+ +QIDTT+ILFICGGAF+GLE +I RRV ASIGFGA++ QG F+ P DLV FG+IPE VGR P I+ T+GL +E +V ++T+PK++++KQY LFAM+DV+FHVT L IA A + TGARGLRSI + L E+ YVVP V+ V +D AV G+G Sbjct: 219 KIPTPKEIMTGLNEYVIGQRNVKVALSVGVYNHFKRIFVAE-------------AQAAAQQRKQAEMEEGAFMASANSIPINQLHDGPS----LAEMNLGQFSSSSVSPMME----NRTEGH-------------------------------------SFNSINNPKFARDVEDVEIDKSNILLLGPTGSGKTLLVKTLARLIDVPLVIADATCLTQAGYVGEDVESILFKLYLESGQDIERCQRGIVYIDEADKI-RKSGGNVSISRDVSGEGVQHALLKIVEGNVINVPKEPGRKNPRGDFLQIDTTNILFICGGAFSGLERIINRRVHAASIGFGAQM-----KKKVDDPTVQGRYFENAIPKDLVDFGMIPEFVGRFPIIVSTKGLDIENLVDILTEPKNSIIKQYRRLFAMDDVNFHVTQDGLEAIAQTAFTRGTGARGLRSITDSVLMETQYVVPSRPNVHTVYVDAEAVNGQG 635
BLAST of NO11G01550 vs. NCBI_GenBank
Match: CCA21310.1 (ATPdependent Clp protease ATPbinding subunit clpX putative [Albugo laibachii Nc14]) HSP 1 Score: 362.1 bits (928), Expect = 3.400e-96 Identity = 210/474 (44.30%), Postives = 291/474 (61.39%), Query Frame = 0 Query: 55 DFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGS--VRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527 ++ +L+P+ + QGL+++VIGQE VK LSV+VHNHY RL+ + R T+ + N + DM R L E++L+ + S G+ + N +E VEL+K+N+L+LGPTGSGKTLLAKTLA+L+ VP+VIADATCLT AGYVGEDVES+L+KLYQA+G +IE T+RGI+YIDEIDK+S++++ + RDVSGEGVQQALLKMLEGN+VN+P+ GGRKNP+ + + IDT++ILFICGGAFAGLE+ IA R ++SIGFGA + A + VEP+DL+ FG+IPE +GRLP I+ T+GL ++MV+++++PK+++++Q+ LFA++ V F VT AL +A +ALEK TGARGLRSILE L + M+ +PD V AV +D Sbjct: 120 EYSILTPRMMCQGLDDYVIGQESVKKVLSVAVHNHYKRLHLLDLMR---------------------------AQKEAAVAKATMLKSRIELNDLPEGLSDMS------RRLLLEQVLSGLNEKSWS--------------------------ESGVTVTEN---------LKILEDVELDKTNVLLLGPTGSGKTLLAKTLARLVKVPIVIADATCLTQAGYVGEDVESVLFKLYQASGYNIEATQRGIVYIDEIDKISRKNATTNIARDVSGEGVQQALLKMLEGNLVNIPEKGGRKNPRDDCVTIDTSNILFICGGAFAGLEKTIAARTCRSSIGFGAIM----PNTDLHMQKEAAACMENVEPEDLIAFGLIPEFIGRLPVIVSTRGLQKQEMVRILSEPKNSIVRQFKALFALQGVEFVVTKGALEAVAEIALEKNTGARGLRSILERTLVDVMFDLPDLPSVRAVHVD 521
BLAST of NO11G01550 vs. NCBI_GenBank
Match: OQR96586.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Achlya hypogyna]) HSP 1 Score: 361.3 bits (926), Expect = 5.800e-96 Identity = 219/477 (45.91%), Postives = 281/477 (58.91%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEI-LNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPS-VEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAV 530 +VL+P+EIY GL ++VIGQE VK L+V VHNHY RL + + N + V EP SV++ ++ I L A + PS+L P P+ + VE++K+NIL++GPTGSGKTL+AKTLA+L VPLVIADATCLT AGYVGEDVES+LYKLYQAA D+E +RGIIYIDEIDK+S++ RDVSGEGVQQALLKMLEG VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE V++RR ++ASIGF +++ + G L EP DLV +G+IPE VGR P ++ T GLT ++V+VV++PK++L+KQY LFA+ DV FHVT L IA +A+ + TGARGLR+I E L ++M+ VPD V AV +D V Sbjct: 166 KVLTPREIYDGLNKYVIGQENVKKALAVGVHNHYKRLSMNFKPKSDADESHA---------------------------------NSPRISGVADEP--------SVYQSVKHGIQLEAIAVPPSALQADTSATVSP------------------------------ETPKPTDDDAVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDLEAAQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFIAIDTTNILFICGGAFAGLEHVVSRRTAQASIGFESQMKDTKVTDLDRV----GELLSLSEPQDLVAYGLIPEFVGRFPVLVSTLGLTRPELVRVVSEPKNSLIKQYRALFALHDVDFHVTTCGLDAIAELAVRRNTGARGLRAIFERTLMDTMFHVPDMAHVRAVYVDADV 567
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_008875916.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans] >ETV95215.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans]) HSP 1 Score: 360.5 bits (924), Expect = 1.000e-95 Identity = 205/472 (43.43%), Postives = 278/472 (58.90%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527 +VL+P++I+ GL +VIGQ+ VK LSV VHNHY RL + ++ + G++H + A + +P R SR P + VEL+K+N++++GPTGSGKTL+AKTLA++ VPLVIADATCLT AGYVGEDVES+L+KLYQAA D++ +RGI+YIDEIDK+S++ RDVSGEGVQQALLKMLEG VVNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE++++RR + +SIGFGA + + G L + EP DLV +G+IPE VGR P ++ T GL+ +++V+V+T+PK++L+KQY LFA+ DV FHV+ L +A +A+++ TGARGLR+I E AL E+M+ +PD VNAV +D Sbjct: 194 QVLTPRQIFDGLNTYVIGQDAVKKALSVGVHNHYKRLSMHAKKKK----------------------------------------------------ASAEQNRGTIHSLGHGVHVEAINADP----------------------------------------RLESR--PKADEVELDKTNMMIVGPTGSGKTLMAKTLARMAQVPLVIADATCLTQAGYVGEDVESILFKLYQAANYDVDAAQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCVVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEKIVSRRTASSSIGFGARMPNTKLDELDNI----GQLLTQSEPQDLVSYGLIPEFVGRFPVVVSTLGLSQDELVRVLTEPKNSLVKQYQALFALNDVEFHVSRCGLEAVADLAVQRNTGARGLRAIFERALVETMFHIPDMPNVNAVYVD 567
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_008619502.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Saprolegnia diclina VS20] >EQC27108.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Saprolegnia diclina VS20]) HSP 1 Score: 358.2 bits (918), Expect = 4.900e-95 Identity = 220/504 (43.65%), Postives = 291/504 (57.74%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSV-EPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETY 558 +VL+P+EIY GL ++VIGQE VK L+V VHNHY RL + + +G ++ +S D SV ++ L A + PS + + A + P +V + VE++K+NIL++GPTGSGKTL+AKTLA+L VPLVIADATCLT AGYVGEDVES+LYKLYQAA D+E ++GIIYIDEIDK+S++ RDVSGEGVQQALLKMLEG VNVP+ GGRKNP+GE I IDTT+ILFICGGAFAGLE +++RR + ASIGF +++ + G L + EP DLV +G+IPE VGR P ++ T GL ++V+VV++PK++L+KQY LFA+ +V FHVTP L IA +A+ + TGARGLR+I E L ++M+ VPD + V AV +D G G +LLRG + Y Sbjct: 173 KVLTPREIYDGLNKYVIGQENVKKALAVGVHNHYKRLSMNFKPPEVP------------------------------------IDDGHPRSMRVSAMVDEPAIYQSVKHGIQ---LEAIAVPPS--------------------------------VVAAEGATPPTTPTVAVDDSVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDLEAAQKGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFIAIDTTNILFICGGAFAGLEHIVSRRTATASIGFESQMKDTKVTDLDRV----GELLTQSEPQDLVAYGLIPEFVGRFPVLVSTLGLNRHELVRVVSEPKNSLIKQYRALFALHNVDFHVTPCGLDAIAELAVRRNTGARGLRAIFERTLMDTMFHVPDMQHVRAVYVD---------GDVIFGAKQPVLLRGDVTIAEY 592 The following BLAST results are available for this feature:
BLAST of NO11G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01550 ID=NO11G01550|Name=NO11G01550|organism=Nannochloropsis oceanica|type=gene|length=3480bpback to top protein sequence of NO11G01550.1 >NO11G01550.1-protein ID=NO11G01550.1-protein|Name=NO11G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bpback to top Synonyms
Publications
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